scripts/_baseline-deps.R

[wes-a2ai]

Metadata

• initial qc commit: 0d256c0
• author: a2aigen [email protected]
• qc type: R script
• md5 checksum: dc3620a44645495152e6846eda287d6d
• file history: https://github.com/A2-ai/gilead_ghqc_demo/commits/main/scripts/_baseline-deps.R

R script

Note: This checklist is NOT an exhaustive list of all checks. User is encouraged to personalise checklist for individual study needs.

• Preamble follows Section 4.1.3 of Analysis and Reporting Guidance - Metworx v1.2
• Seeds are set correctly; simulations, samplings, datasets, tables, figures, listings, etc. are reproducible
• Any & all sourced files are included in the QC log and are individually QCed.
• Output directories and file paths are correct
• Inputted models, datasets, or other objects are correct
• Functions, calculations, manipulations, and summaries, etc. reflect the intent of the analysis
• All outputted TFLs include an audit trail in the footnotes.
• All outputted figures have legible font and formatting within files (e.g. PDFs, PNGs, etc.)
• There is no hardcoding; source is identified as a comment for any values that must be hard coded
• Data manipulations are performed as the analyst intended.
• Ungrouping is performed following a grouped manipulation