diff --git a/.github/workflows/tag_and_publish.yml b/.github/workflows/tag_and_publish.yml
index ccc6605..9442a32 100644
--- a/.github/workflows/tag_and_publish.yml
+++ b/.github/workflows/tag_and_publish.yml
@@ -14,10 +14,10 @@ jobs:
ref: ${{ env.DEFAULT_BRANCH }}
fetch-depth: 0
token: ${{ secrets.SERVICE_TOKEN }}
- - name: Set up Python 3.10
+ - name: Set up Python 3.8
uses: actions/setup-python@v3
with:
- python-version: '3.10'
+ python-version: '3.8'
- name: Install dependencies
run: |
python -m pip install -e .[dev] --no-cache-dir
@@ -64,55 +64,22 @@ jobs:
secrets:
SERVICE_TOKEN: ${{ secrets.SERVICE_TOKEN }}
publish:
- runs-on: ubuntu-latest
- env:
- GO_VERSION: '1.14.12'
- GO_OS: 'linux'
- GO_ARCH: 'amd64'
- SINGULARITY_VERSION: '3.7.0'
needs: tag
+ runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Pull latest changes
run: git pull origin main
+ - name: Set up Python 3.8
+ uses: actions/setup-python@v2
+ with:
+ python-version: 3.8
- name: Install dependencies
run: |
- sudo apt-get update && sudo apt-get install -y \
- build-essential \
- libssl-dev \
- uuid-dev \
- libgpgme11-dev \
- squashfs-tools \
- libseccomp-dev \
- wget \
- pkg-config \
- procps
- - name: Install GO
- run: |
- wget https://dl.google.com/go/go$GO_VERSION.$GO_OS-$GO_ARCH.tar.gz
- sudo tar -C /usr/local -xzvf go$GO_VERSION.$GO_OS-$GO_ARCH.tar.gz
- sudo rm go$GO_VERSION.$GO_OS-$GO_ARCH.tar.gz
- echo 'export PATH=$PATH:/usr/local/go/bin' | sudo tee -a /etc/profile
- - name: Install Singularity
- run: |
- cd ..
- wget https://github.com/hpcng/singularity/releases/download/v${SINGULARITY_VERSION}/singularity-${SINGULARITY_VERSION}.tar.gz
- sudo tar -xzf singularity-${SINGULARITY_VERSION}.tar.gz
- sudo rm singularity-${SINGULARITY_VERSION}.tar.gz
- echo "Finished installing binaries"
- export PATH=$PATH:/usr/local/go/bin
- cd singularity
- sudo ./mconfig --without-suid
- sudo make -C ./builddir
- sudo make -C ./builddir install
- - name: Build sif container
- run: |
- ls /
- ls
- mkdir build
- sudo singularity build build/container.sif scripts/singularity_build.def
- - name: Login and Deploy Container
- run: |
- echo ${{ secrets.GITHUB_TOKEN }} | singularity remote login -u ${{ github.actor }} --password-stdin oras://ghcr.io
- singularity push build/container.sif oras://ghcr.io/${GITHUB_REPOSITORY}:${{ needs.tag.outputs.new_version }}
- singularity push build/container.sif oras://ghcr.io/${GITHUB_REPOSITORY}:latest
+ pip install --upgrade setuptools wheel twine build
+ python -m build
+ twine check dist/*
+ - name: Publish on PyPI
+ uses: pypa/gh-action-pypi-publish@release/v1
+ with:
+ password: ${{ secrets.AIND_PYPI_TOKEN }}
diff --git a/.github/workflows/test_and_lint.yml b/.github/workflows/test_and_lint.yml
index 51a8319..e38bbc5 100644
--- a/.github/workflows/test_and_lint.yml
+++ b/.github/workflows/test_and_lint.yml
@@ -10,7 +10,7 @@ jobs:
runs-on: ubuntu-latest
strategy:
matrix:
- python-version: [ '3.9', '3.10', '3.11' ]
+ python-version: [ '3.8', '3.9', '3.10', '3.11' ]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
diff --git a/README.md b/README.md
index d6d7099..c82bd83 100644
--- a/README.md
+++ b/README.md
@@ -9,43 +9,41 @@
## Usage
-There are 4 main ways to run a data transformation job:
-- from a python script
-- from the command line passing in the settings as a json string
-- from the command line pointing to a config file
-- from the command line with env vars
-
-Assuming `output_dir` exists:
-
-### From python
+Please import this package and extend the abstract base class to define a new transformation job
```python
-from aind_data_transformation.ephys.ephys_job import EphysJobSettings, EphysCompressionJob
-from pathlib import Path
-
-input_source = Path("./tests/resources/v0.6.x_neuropixels_multiexp_multistream")
-output_dir = Path("output_dir")
-
-job_settings = EphysJobSettings(input_source=input_source, output_directory=output_dir)
-job = EphysCompressionJob(job_settings=job_settings)
+from aind_data_transformation.core import (
+ BasicJobSettings,
+ GenericEtl,
+ JobResponse,
+)
+
+# An example JobSettings
+class NewTransformJobSettings(BasicJobSettings):
+ # Add extra fields needed, for example, a random seed
+ random_seed: Optional[int] = 0
+
+# An example EtlJob
+class NewTransformJob(GenericEtl[NewTransformJobSettings]):
+
+ # This method needs to be defined
+ def run_job(self) -> JobResponse:
+ """
+ Main public method to run the transformation job
+ Returns
+ -------
+ JobResponse
+ Information about the job that can be used for metadata downstream.
+
+ """
+ job_start_time = datetime.now()
+ # Do something here
+ job_end_time = datetime.now()
+ return JobResponse(
+ status_code=200,
+ message=f"Job finished in: {job_end_time-job_start_time}",
+ data=None,
+ )
-response = job.run_job()
-```
-
-### From the command line passing in settings as a json str
-```bash
-python -m aind_data_transformation.ephys.ephys_job --job-settings '{"input_source":"./tests/resources/v0.6.x_neuropixels_multiexp_multistream","output_directory":"output_dir"}'
-```
-
-### From the command line passing in settings via a config file
-```bash
-python -m aind_data_transformation.ephys.ephys_job --config-file configs.json
-```
-
-### From the command line passing in settings via environment variables
-```bash
-export TRANSFORMATION_JOB_INPUT_SOURCE="./tests/resources/v0.6.x_neuropixels_multiexp_multistream"
-export TRANSFORMATION_JOB_OUTPUT_DIRECTORY="output_dir"
-python -m aind_data_transformation.ephys.ephys_job
```
diff --git a/pyproject.toml b/pyproject.toml
index 1c23d00..d154432 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -6,7 +6,7 @@ build-backend = "setuptools.build_meta"
name = "aind-data-transformation"
description = "Generated from aind-library-template"
license = {text = "MIT"}
-requires-python = ">=3.9"
+requires-python = ">=3.8"
authors = [
{name = "Allen Institute for Neural Dynamics"}
]
@@ -22,15 +22,7 @@ dependencies = [
]
[project.optional-dependencies]
-ephys = [
- 'spikeinterface[full]>=0.100.5',
- 'probeinterface==0.2.21',
- 'wavpack-numcodecs>=0.1.3,<=0.1.5',
- 'zarr==2.16.1',
- 'numcodecs==0.11.0'
-]
dev = [
- 'aind-data-transformation[ephys]',
'black',
'coverage',
'flake8',
@@ -48,7 +40,7 @@ version = {attr = "aind_data_transformation.__version__"}
[tool.black]
line-length = 79
-target_version = ['py39']
+target_version = ['py38']
exclude = '''
(
diff --git a/src/aind_data_transformation/ephys/__init__.py b/src/aind_data_transformation/ephys/__init__.py
deleted file mode 100644
index c25a0ae..0000000
--- a/src/aind_data_transformation/ephys/__init__.py
+++ /dev/null
@@ -1 +0,0 @@
-"""Package to handle ephys compression job"""
diff --git a/src/aind_data_transformation/ephys/ephys_job.py b/src/aind_data_transformation/ephys/ephys_job.py
deleted file mode 100644
index 40f92f5..0000000
--- a/src/aind_data_transformation/ephys/ephys_job.py
+++ /dev/null
@@ -1,453 +0,0 @@
-"""Module to handle ephys data compression"""
-
-import logging
-import os
-import platform
-import shutil
-import sys
-from datetime import datetime
-from pathlib import Path
-from typing import Iterator, Literal, Optional, Union
-
-import numpy as np
-import spikeinterface.preprocessing as spre
-from numcodecs import Blosc
-from pydantic import Field
-from spikeinterface import extractors as se
-from wavpack_numcodecs import WavPack
-
-from aind_data_transformation.core import (
- BasicJobSettings,
- GenericEtl,
- JobResponse,
- get_parser,
-)
-from aind_data_transformation.ephys.models import (
- CompressorName,
- ReaderName,
- RecordingBlockPrefixes,
-)
-from aind_data_transformation.ephys.npopto_correction import (
- correct_np_opto_electrode_locations,
-)
-
-
-class EphysJobSettings(BasicJobSettings):
- """EphysCompressionJob settings."""
-
- # reader settings
- reader_name: ReaderName = Field(
- default=ReaderName.OPENEPHYS, description="Name of reader to use."
- )
- # Clip settings
- clip_n_frames: int = Field(
- default=100,
- description="Number of frames to clip the data.",
- title="Clip N Frames",
- )
- # Compress settings
- random_seed: Optional[int] = 0
- compress_write_output_format: Literal["zarr"] = Field(
- default="zarr",
- description=(
- "Output format for compression. Currently, only zarr supported."
- ),
- title="Write Output Format",
- )
- compress_max_windows_filename_len: int = Field(
- default=150,
- description=(
- "Windows OS max filename length is 256. The zarr write will "
- "raise an error if it detects that the destination directory has "
- "a long name."
- ),
- title="Compress Max Windows Filename Len",
- )
- compressor_name: CompressorName = Field(
- default=CompressorName.WAVPACK,
- description="Type of compressor to use.",
- title="Compressor Name.",
- )
- # It will be safer if these kwargs fields were objects with known schemas
- compressor_kwargs: dict = Field(
- default={"level": 3},
- description="Arguments to be used for the compressor.",
- title="Compressor Kwargs",
- )
- compress_job_save_kwargs: dict = Field(
- default={"n_jobs": -1}, # -1 to use all available cpu cores.
- description="Arguments for recording save method.",
- title="Compress Job Save Kwargs",
- )
- compress_chunk_duration: str = Field(
- default="1s",
- description="Duration to be used for chunks.",
- title="Compress Chunk Duration",
- )
-
- # Scale settings
- scale_num_chunks_per_segment: int = Field(
- default=100,
- description="Num of chunks per segment to scale.",
- title="Scale Num Chunks Per Segment",
- )
- scale_chunk_size: int = Field(
- default=10000,
- description="Chunk size to scale.",
- title="Scale Chunk Size",
- )
-
-
-class EphysCompressionJob(GenericEtl[EphysJobSettings]):
- """Main class to handle ephys data compression"""
-
- def _get_read_blocks(self) -> Iterator[dict]:
- """
- Uses SpikeInterface to extract read blocks from the input source.
-
- Returns:
- Iterator[dict]
- A generator of read blocks. A single read_block is dict with keys:
- ('recording', 'experiment_name', 'stream_name')
-
- """
- nblocks = se.get_neo_num_blocks(
- self.job_settings.reader_name.value, self.job_settings.input_source
- )
- stream_names, stream_ids = se.get_neo_streams(
- self.job_settings.reader_name.value, self.job_settings.input_source
- )
- # load first stream to map block_indices to experiment_names
- rec_test = se.read_openephys(
- self.job_settings.input_source,
- block_index=0,
- stream_name=stream_names[0],
- )
- record_node = list(rec_test.neo_reader.folder_structure.keys())[0]
- experiments = rec_test.neo_reader.folder_structure[record_node][
- "experiments"
- ]
- exp_ids = list(experiments.keys())
- experiment_names = [
- experiments[exp_id]["name"] for exp_id in sorted(exp_ids)
- ]
- for block_index in range(nblocks):
- for stream_name in stream_names:
- rec = se.read_openephys(
- self.job_settings.input_source,
- stream_name=stream_name,
- block_index=block_index,
- load_sync_timestamps=True,
- )
- yield (
- {
- "recording": rec,
- "experiment_name": experiment_names[block_index],
- "stream_name": stream_name,
- }
- )
-
- def _get_streams_to_clip(self) -> Iterator[dict]:
- """
- Returns
- -------
- Iterator[dict]
- A list of dicts with information on which streams to clip.
- The dictionary has keys ('data', 'relative_path_name', 'n_chan')
- The 'data' is a numpy.memmap object.
-
- """
- stream_names, stream_ids = se.get_neo_streams(
- self.job_settings.reader_name.value, self.job_settings.input_source
- )
- for dat_file in self.job_settings.input_source.glob("**/*.dat"):
- oe_stream_name = dat_file.parent.name
- si_stream_name = [
- stream_name
- for stream_name in stream_names
- if oe_stream_name in stream_name
- ][0]
- n_chan = se.read_openephys(
- self.job_settings.input_source,
- block_index=0,
- stream_name=si_stream_name,
- ).get_num_channels()
- data = np.memmap(
- filename=str(dat_file), dtype="int16", order="C", mode="r"
- ).reshape(-1, n_chan)
- yield {
- "data": data,
- "relative_path_name": str(
- dat_file.relative_to(self.job_settings.input_source)
- ),
- "n_chan": n_chan,
- }
-
- def _get_compressor(self) -> Union[Blosc, WavPack]:
- """
- Utility method to construct a compressor class.
- Returns
- -------
- Union[Blosc, WavPack]
- Either an instantiated Blosc or WavPack class.
-
- """
- if self.job_settings.compressor_name == CompressorName.BLOSC:
- return Blosc(**self.job_settings.compressor_kwargs)
- elif self.job_settings.compressor_name == CompressorName.WAVPACK:
- return WavPack(**self.job_settings.compressor_kwargs)
- else:
- # TODO: This is validated during the construction of JobSettings,
- # so we can probably just remove this exception.
- raise Exception(
- f"Unknown compressor. Please select one of "
- f"{[c for c in CompressorName]}"
- )
-
- @staticmethod
- def _scale_read_blocks(
- read_blocks: Iterator[dict],
- random_seed: Optional[int] = None,
- num_chunks_per_segment: int = 100,
- chunk_size: int = 10000,
- ):
- """
- Scales read_blocks. A single read_block is dict with keys:
- ('recording', 'block_index', 'stream_name')
- Parameters
- ----------
- read_blocks : Iterator[dict]
- A single read_block is dict with keys:
- ('recording', 'block_index', 'stream_name')
- random_seed : Optional[int]
- Optional seed for correct_lsb method. Default is None.
- num_chunks_per_segment : int
- Default is 100
- chunk_size : int
- Default is 10000
-
- Returns
- -------
- Iterator[dict]
- An iterator over read_blocks. A single read_block is dict with keys:
- ('scale_recording', 'block_index', 'stream_name')
- """
- for read_block in read_blocks:
- # We don't need to scale the NI-DAQ recordings
- # TODO: Convert this to regex matching?
- if RecordingBlockPrefixes.nidaq.value in read_block["stream_name"]:
- rec_to_compress = read_block["recording"]
- else:
- correct_lsb_args = {
- "num_chunks_per_segment": num_chunks_per_segment,
- "chunk_size": chunk_size,
- }
- if random_seed is not None:
- correct_lsb_args["seed"] = random_seed
- rec_to_compress = spre.correct_lsb(
- read_block["recording"], **correct_lsb_args
- )
- yield (
- {
- "scaled_recording": rec_to_compress,
- "experiment_name": read_block["experiment_name"],
- "stream_name": read_block["stream_name"],
- }
- )
-
- def _copy_and_clip_data(
- self,
- dst_dir: Path,
- stream_gen: Iterator[dict],
- ) -> None:
- """
- Copies the raw data to a new directory with the .dat files clipped to
- just a small number of frames. This allows someone to still use the
- spikeinterface api on the clipped data set.
- Parameters
- ----------
- dst_dir : Path
- Desired location for clipped data set
- stream_gen : Iterator[dict]
- An Iterator where each item is a dictionary with shape,
- ('data': memmap(dat file),
- 'relative_path_name': path name of raw data to new dir correctly
- 'n_chan': number of channels)
- Returns
- -------
- None
- None. Copies clipped *.dat files to a new directory.
-
- """
-
- # first: copy everything except .dat files
- patterns_to_ignore = ["*.dat"]
- shutil.copytree(
- self.job_settings.input_source,
- dst_dir,
- ignore=shutil.ignore_patterns(*patterns_to_ignore),
- )
- # second: copy clipped dat files
- for stream in stream_gen:
- data = stream["data"]
- rel_path_name = stream["relative_path_name"]
- n_chan = stream["n_chan"]
- dst_raw_file = dst_dir / rel_path_name
- dst_data = np.memmap(
- filename=dst_raw_file,
- dtype="int16",
- shape=(self.job_settings.clip_n_frames, n_chan),
- order="C",
- mode="w+",
- )
- dst_data[:] = data[: self.job_settings.clip_n_frames]
-
- @staticmethod
- def _compress_and_write_block(
- read_blocks: Iterator[dict],
- compressor: Union[WavPack, Blosc],
- output_dir: Path,
- job_kwargs: dict,
- max_windows_filename_len: int,
- output_format: str = "zarr",
- ) -> None:
- """
- Compress and write read_blocks.
-
- Parameters
- ----------
- read_blocks : Iterator[dict]
- Either [{'recording', 'block_index', 'stream_name'},...] or
- [{'scale_recording', 'block_index', 'stream_name'},...]
- compressor : Union[WavPack, Blosc]
- output_dir : Path
- Output directory to write compressed data
- job_kwargs : dict
- Recording save job kwargs
- max_windows_filename_len : int
- Windows OS has a maximum filename length. If the root directory is
- deeply nested, the zarr filenames might be too long for Windows.
- This is added as an arg, so we can raise better error messages.
- output_format : str
- Default is zarr
-
- Returns
- -------
- None
- Writes data to a folder.
-
- """
- if job_kwargs["n_jobs"] == -1:
- job_kwargs["n_jobs"] = os.cpu_count()
-
- for read_block in read_blocks:
- if "recording" in read_block:
- rec = read_block["recording"]
- else:
- rec = read_block["scaled_recording"]
- experiment_name = read_block["experiment_name"]
- stream_name = read_block["stream_name"]
- zarr_path = output_dir / f"{experiment_name}_{stream_name}.zarr"
- if (
- platform.system() == "Windows"
- and len(str(zarr_path)) > max_windows_filename_len
- ):
- raise Exception(
- f"File name for zarr path is too long "
- f"({len(str(zarr_path))})"
- f" and might lead to errors. Use a shorter destination "
- f"path."
- )
- # compression for times is disabled
- _ = rec.save(
- format=output_format,
- folder=zarr_path,
- compressor=compressor,
- compressor_by_dataset=dict(times=None),
- **job_kwargs,
- )
-
- def _compress_raw_data(self) -> None:
- """Compresses ephys data"""
-
- # Correct NP-opto electrode positions:
- # correction is skipped if Neuropix-PXI version > 0.4.0
- # It'd be nice if the original data wasn't modified.
- correct_np_opto_electrode_locations(self.job_settings.input_source)
- # Clip the data
- logging.info("Clipping source data. This may take a minute.")
- clipped_data_path = (
- self.job_settings.output_directory / "ecephys_clipped"
- )
- streams_to_clip = self._get_streams_to_clip()
- self._copy_and_clip_data(
- dst_dir=clipped_data_path,
- stream_gen=streams_to_clip,
- )
-
- logging.info("Finished clipping source data.")
-
- # Compress the data
- logging.info("Compressing source data.")
- compressed_data_path = (
- self.job_settings.output_directory / "ecephys_compressed"
- )
- read_blocks = self._get_read_blocks()
- compressor = self._get_compressor()
- scaled_read_blocks = self._scale_read_blocks(
- read_blocks=read_blocks,
- random_seed=self.job_settings.random_seed,
- num_chunks_per_segment=(
- self.job_settings.scale_num_chunks_per_segment
- ),
- chunk_size=self.job_settings.scale_chunk_size,
- )
- self._compress_and_write_block(
- read_blocks=scaled_read_blocks,
- compressor=compressor,
- max_windows_filename_len=(
- self.job_settings.compress_max_windows_filename_len
- ),
- output_dir=compressed_data_path,
- output_format=self.job_settings.compress_write_output_format,
- job_kwargs=self.job_settings.compress_job_save_kwargs,
- )
- logging.info("Finished compressing source data.")
-
- return None
-
- def run_job(self) -> JobResponse:
- """
- Main public method to run the compression job
- Returns
- -------
- JobResponse
- Information about the job that can be used for metadata downstream.
-
- """
- job_start_time = datetime.now()
- self._compress_raw_data()
- job_end_time = datetime.now()
- return JobResponse(
- status_code=200,
- message=f"Job finished in: {job_end_time-job_start_time}",
- data=None,
- )
-
-
-if __name__ == "__main__":
- sys_args = sys.argv[1:]
- parser = get_parser()
- cli_args = parser.parse_args(sys_args)
- if cli_args.job_settings is not None:
- job_settings = EphysJobSettings.model_validate_json(
- cli_args.job_settings
- )
- elif cli_args.config_file is not None:
- job_settings = EphysJobSettings.from_config_file(cli_args.config_file)
- else:
- # Construct settings from env vars
- job_settings = EphysJobSettings()
- job = EphysCompressionJob(job_settings=job_settings)
- job_response = job.run_job()
- logging.info(job_response.model_dump_json())
diff --git a/src/aind_data_transformation/ephys/models.py b/src/aind_data_transformation/ephys/models.py
deleted file mode 100644
index 981d86d..0000000
--- a/src/aind_data_transformation/ephys/models.py
+++ /dev/null
@@ -1,25 +0,0 @@
-"""Helpful models used in the ephys compression job"""
-
-from enum import Enum
-
-from numcodecs import Blosc
-
-
-class ReaderName(str, Enum):
- """Enum for readers"""
-
- OPENEPHYS = "openephys"
-
-
-class CompressorName(str, Enum):
- """Enum for compression algorithms a user can select"""
-
- BLOSC = Blosc.codec_id
- WAVPACK = "wavpack"
-
-
-class RecordingBlockPrefixes(str, Enum):
- """Enum for types of recording blocks."""
-
- neuropix = "Neuropix"
- nidaq = "NI-DAQ"
diff --git a/src/aind_data_transformation/ephys/npopto_correction.py b/src/aind_data_transformation/ephys/npopto_correction.py
deleted file mode 100644
index ba2b4a5..0000000
--- a/src/aind_data_transformation/ephys/npopto_correction.py
+++ /dev/null
@@ -1,117 +0,0 @@
-"""Module to handle np_opto xml settings corrections."""
-
-import logging
-import xml.etree.ElementTree as ET
-from pathlib import Path
-from typing import Dict, Tuple, Union
-
-import numpy as np
-from packaging.version import parse
-
-# geometry properties for NP-opto
-X_PITCH = 48
-X_OFFSET = 11
-Y_PITCH = 20
-NUMEL_IN_COL = 192
-
-
-def get_standard_np_opto_electrode_positions() -> (
- Tuple[Dict[str, str], Dict[str, str]]
-):
- """
- Get the standard positions for the np_opto electrodes
- Returns
- -------
- Tuple[Dict[str, str], Dict[str, str]]
- """
- npopto_electrode_xpos_arr = [X_OFFSET, X_OFFSET + X_PITCH] * NUMEL_IN_COL
- npopto_electrode_ypos_arr = np.concatenate(
- [i * np.array([Y_PITCH, Y_PITCH]) for i in range(NUMEL_IN_COL)]
- )
- npopto_electrode_xpos = {}
- npopto_electrode_ypos = {}
- for ch, (xpos, ypos) in enumerate(
- zip(npopto_electrode_xpos_arr, npopto_electrode_ypos_arr)
- ):
- npopto_electrode_xpos[f"CH{ch}"] = str(xpos)
- npopto_electrode_ypos[f"CH{ch}"] = str(ypos)
- return npopto_electrode_xpos, npopto_electrode_ypos
-
-
-def correct_np_opto_electrode_locations(input_dir: Union[str, Path]) -> None:
- """
-
- Parameters
- ----------
- input_dir : str
- Directory location of experimental data root. The xml files located under
- this directory will be checked if Neuropix-PXI <= v0.4.0 is used. This
- method will copy the original file to settings.xml.wrong and modify
- the original file to use the correct np_opto_positions.
-
- Returns
- -------
- None
- Modifies the settings.xml file and copies it to a new location.
-
- """
- # find settings files
- input_dir = Path(input_dir)
- settings_files = list(input_dir.glob("**/*.xml"))
-
- (
- npopto_electrode_xpos,
- npopto_electrode_ypos,
- ) = get_standard_np_opto_electrode_positions()
-
- for settings_file in settings_files:
- # parse xml
- tree = ET.parse(str(settings_file))
- root = tree.getroot()
-
- signal_chain = root.find("SIGNALCHAIN")
- neuropix_pxi = None
- for processor in signal_chain:
- if "PROCESSOR" == processor.tag:
- name = processor.attrib["name"]
- if "Neuropix-PXI" in name:
- neuropix_pxi = processor
- break
-
- if neuropix_pxi is None:
- return
- neuropix_pxi_version = parse(neuropix_pxi.attrib["libraryVersion"])
- if neuropix_pxi_version > parse("0.4.0"):
- # no correction needed for this plugin version
- return
-
- editor = neuropix_pxi.find("EDITOR")
- np_probes = editor.findall("NP_PROBE")
-
- needs_correction = False
- for np_probe in np_probes:
- if "OPTO" in np_probe.attrib["headstage_part_number"]:
- logging.info("Found NP-OPTO!")
- needs_correction = True
-
- # update channel locations
- electrode_xpos = np_probe.find("ELECTRODE_XPOS")
- electrode_ypos = np_probe.find("ELECTRODE_YPOS")
- electrode_xpos.attrib = npopto_electrode_xpos
- electrode_ypos.attrib = npopto_electrode_ypos
-
- settings_file_path = str(settings_file)
- if needs_correction:
- wrong_settings_file = settings_file.parent / "settings.xml.wrong"
- logging.info(
- f"Renaming wrong NP-OPTO settings file as "
- f"{wrong_settings_file}"
- )
- settings_file.rename(wrong_settings_file)
- logging.info(
- f"Saving correct NP-OPTO settings file as "
- f"{settings_file_path}"
- )
- tree.write(settings_file_path)
- else:
- logging.info(f"No NP-OPTO probes found in {settings_file_path}")
diff --git a/tests/resources/np_opto_corrections/settings_2022_07/settings.xml b/tests/resources/np_opto_corrections/settings_2022_07/settings.xml
deleted file mode 100644
index 2f33189..0000000
--- a/tests/resources/np_opto_corrections/settings_2022_07/settings.xml
+++ /dev/null
@@ -1,426 +0,0 @@
-
-
-
-
- 0.6.0
- 8
- 14 Jul 2022 13:55:57
- Windows 10
-
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diff --git a/tests/resources/np_opto_corrections/settings_2023_04/settings.xml b/tests/resources/np_opto_corrections/settings_2023_04/settings.xml
deleted file mode 100644
index 1d564d7..0000000
--- a/tests/resources/np_opto_corrections/settings_2023_04/settings.xml
+++ /dev/null
@@ -1,459 +0,0 @@
-
-
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-
- 0.6.2
- 8
- 3 Apr 2023 18:17:07
- Windows 10
-
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diff --git a/tests/resources/np_opto_corrections/settings_2024_01/settings.xml b/tests/resources/np_opto_corrections/settings_2024_01/settings.xml
deleted file mode 100644
index 166ee58..0000000
--- a/tests/resources/np_opto_corrections/settings_2024_01/settings.xml
+++ /dev/null
@@ -1,676 +0,0 @@
-
-
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-
- 0.6.6
- 8
- 12 Jan 2024 15:27:46
- Windows 10
-
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diff --git a/tests/resources/np_opto_corrections/settings_altered_no_pxi/settings.xml b/tests/resources/np_opto_corrections/settings_altered_no_pxi/settings.xml
deleted file mode 100644
index 23b2f17..0000000
--- a/tests/resources/np_opto_corrections/settings_altered_no_pxi/settings.xml
+++ /dev/null
@@ -1,703 +0,0 @@
-
-
-
-
- 0.6.6
- 8
- 1 Nov 2023 16:48:18
- Windows 10
-
-
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diff --git a/tests/resources/np_opto_corrections/standard_positions.json b/tests/resources/np_opto_corrections/standard_positions.json
deleted file mode 100644
index 00a1404..0000000
--- a/tests/resources/np_opto_corrections/standard_positions.json
+++ /dev/null
@@ -1,774 +0,0 @@
-[
- {
- "CH0": "11",
- "CH1": "59",
- "CH2": "11",
- "CH3": "59",
- "CH4": "11",
- "CH5": "59",
- "CH6": "11",
- "CH7": "59",
- "CH8": "11",
- "CH9": "59",
- "CH10": "11",
- "CH11": "59",
- "CH12": "11",
- "CH13": "59",
- "CH14": "11",
- "CH15": "59",
- "CH16": "11",
- "CH17": "59",
- "CH18": "11",
- "CH19": "59",
- "CH20": "11",
- "CH21": "59",
- "CH22": "11",
- "CH23": "59",
- "CH24": "11",
- "CH25": "59",
- "CH26": "11",
- "CH27": "59",
- "CH28": "11",
- "CH29": "59",
- "CH30": "11",
- "CH31": "59",
- "CH32": "11",
- "CH33": "59",
- "CH34": "11",
- "CH35": "59",
- "CH36": "11",
- "CH37": "59",
- "CH38": "11",
- "CH39": "59",
- "CH40": "11",
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- "CH42": "11",
- "CH43": "59",
- "CH44": "11",
- "CH45": "59",
- "CH46": "11",
- "CH47": "59",
- "CH48": "11",
- "CH49": "59",
- "CH50": "11",
- "CH51": "59",
- "CH52": "11",
- "CH53": "59",
- "CH54": "11",
- "CH55": "59",
- "CH56": "11",
- "CH57": "59",
- "CH58": "11",
- "CH59": "59",
- "CH60": "11",
- "CH61": "59",
- "CH62": "11",
- "CH63": "59",
- "CH64": "11",
- "CH65": "59",
- "CH66": "11",
- "CH67": "59",
- "CH68": "11",
- "CH69": "59",
- "CH70": "11",
- "CH71": "59",
- "CH72": "11",
- "CH73": "59",
- "CH74": "11",
- "CH75": "59",
- "CH76": "11",
- "CH77": "59",
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- "CH79": "59",
- "CH80": "11",
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- "CH85": "59",
- "CH86": "11",
- "CH87": "59",
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- "CH91": "59",
- "CH92": "11",
- "CH93": "59",
- "CH94": "11",
- "CH95": "59",
- "CH96": "11",
- "CH97": "59",
- "CH98": "11",
- "CH99": "59",
- "CH100": "11",
- "CH101": "59",
- "CH102": "11",
- "CH103": "59",
- "CH104": "11",
- "CH105": "59",
- "CH106": "11",
- "CH107": "59",
- "CH108": "11",
- "CH109": "59",
- "CH110": "11",
- "CH111": "59",
- "CH112": "11",
- "CH113": "59",
- "CH114": "11",
- "CH115": "59",
- "CH116": "11",
- "CH117": "59",
- "CH118": "11",
- "CH119": "59",
- "CH120": "11",
- "CH121": "59",
- "CH122": "11",
- "CH123": "59",
- "CH124": "11",
- "CH125": "59",
- "CH126": "11",
- "CH127": "59",
- "CH128": "11",
- "CH129": "59",
- "CH130": "11",
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- "CH132": "11",
- "CH133": "59",
- "CH134": "11",
- "CH135": "59",
- "CH136": "11",
- "CH137": "59",
- "CH138": "11",
- "CH139": "59",
- "CH140": "11",
- "CH141": "59",
- "CH142": "11",
- "CH143": "59",
- "CH144": "11",
- "CH145": "59",
- "CH146": "11",
- "CH147": "59",
- "CH148": "11",
- "CH149": "59",
- "CH150": "11",
- "CH151": "59",
- "CH152": "11",
- "CH153": "59",
- "CH154": "11",
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- "CH156": "11",
- "CH157": "59",
- "CH158": "11",
- "CH159": "59",
- "CH160": "11",
- "CH161": "59",
- "CH162": "11",
- "CH163": "59",
- "CH164": "11",
- "CH165": "59",
- "CH166": "11",
- "CH167": "59",
- "CH168": "11",
- "CH169": "59",
- "CH170": "11",
- "CH171": "59",
- "CH172": "11",
- "CH173": "59",
- "CH174": "11",
- "CH175": "59",
- "CH176": "11",
- "CH177": "59",
- "CH178": "11",
- "CH179": "59",
- "CH180": "11",
- "CH181": "59",
- "CH182": "11",
- "CH183": "59",
- "CH184": "11",
- "CH185": "59",
- "CH186": "11",
- "CH187": "59",
- "CH188": "11",
- "CH189": "59",
- "CH190": "11",
- "CH191": "59",
- "CH192": "11",
- "CH193": "59",
- "CH194": "11",
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- "CH196": "11",
- "CH197": "59",
- "CH198": "11",
- "CH199": "59",
- "CH200": "11",
- "CH201": "59",
- "CH202": "11",
- "CH203": "59",
- "CH204": "11",
- "CH205": "59",
- "CH206": "11",
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- "CH208": "11",
- "CH209": "59",
- "CH210": "11",
- "CH211": "59",
- "CH212": "11",
- "CH213": "59",
- "CH214": "11",
- "CH215": "59",
- "CH216": "11",
- "CH217": "59",
- "CH218": "11",
- "CH219": "59",
- "CH220": "11",
- "CH221": "59",
- "CH222": "11",
- "CH223": "59",
- "CH224": "11",
- "CH225": "59",
- "CH226": "11",
- "CH227": "59",
- "CH228": "11",
- "CH229": "59",
- "CH230": "11",
- "CH231": "59",
- "CH232": "11",
- "CH233": "59",
- "CH234": "11",
- "CH235": "59",
- "CH236": "11",
- "CH237": "59",
- "CH238": "11",
- "CH239": "59",
- "CH240": "11",
- "CH241": "59",
- "CH242": "11",
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- "CH249": "59",
- "CH250": "11",
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- "CH252": "11",
- "CH253": "59",
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- "CH255": "59",
- "CH256": "11",
- "CH257": "59",
- "CH258": "11",
- "CH259": "59",
- "CH260": "11",
- "CH261": "59",
- "CH262": "11",
- "CH263": "59",
- "CH264": "11",
- "CH265": "59",
- "CH266": "11",
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- "CH268": "11",
- "CH269": "59",
- "CH270": "11",
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- "CH272": "11",
- "CH273": "59",
- "CH274": "11",
- "CH275": "59",
- "CH276": "11",
- "CH277": "59",
- "CH278": "11",
- "CH279": "59",
- "CH280": "11",
- "CH281": "59",
- "CH282": "11",
- "CH283": "59",
- "CH284": "11",
- "CH285": "59",
- "CH286": "11",
- "CH287": "59",
- "CH288": "11",
- "CH289": "59",
- "CH290": "11",
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- "CH292": "11",
- "CH293": "59",
- "CH294": "11",
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- "CH297": "59",
- "CH298": "11",
- "CH299": "59",
- "CH300": "11",
- "CH301": "59",
- "CH302": "11",
- "CH303": "59",
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- "CH305": "59",
- "CH306": "11",
- "CH307": "59",
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- "CH310": "11",
- "CH311": "59",
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- "CH314": "11",
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- "CH326": "11",
- "CH327": "59",
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- "CH330": "11",
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diff --git a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment1/recording1/structure.oebin b/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment1/recording1/structure.oebin
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index 3bfe5c2..0000000
--- a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment1/recording1/structure.oebin
+++ /dev/null
@@ -1,6295 +0,0 @@
-{
- "GUI version": "0.6.0",
- "continuous": [
- {
- "folder_name": "Neuropix-PXI-100.ProbeB/",
- "sample_rate": 30000.0,
- "source_processor_name": "Neuropix-PXI",
- "source_processor_id": 100,
- "stream_name": "ProbeB",
- "recorded_processor": "Record Node",
- "recorded_processor_id": 101,
- "num_channels": 384,
- "channels": [
- {
- "channel_name": "CH1",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH2",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH3",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH4",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH5",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH6",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH7",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH8",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH9",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH10",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH11",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH12",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH13",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH14",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH15",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH16",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH17",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH18",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH19",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH20",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH21",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH22",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH23",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH24",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH25",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH26",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH27",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH28",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH29",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH30",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH31",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH32",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH33",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH34",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH35",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH36",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH37",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH38",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH39",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH40",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH41",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH42",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH43",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH44",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH45",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH46",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH47",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH48",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH49",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH50",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH51",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH52",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH53",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH54",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH55",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH56",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH57",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH58",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH59",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH60",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH61",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH62",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH63",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH64",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH65",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH66",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH67",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH68",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH69",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH70",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH71",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH72",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH73",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
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- {
- "channel_name": "CH74",
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- {
- "channel_name": "CH75",
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- {
- "channel_name": "CH76",
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- {
- "channel_name": "CH77",
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- {
- "channel_name": "CH78",
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- {
- "channel_name": "CH79",
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- {
- "channel_name": "CH80",
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- {
- "channel_name": "CH81",
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- {
- "channel_name": "CH82",
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- {
- "channel_name": "CH83",
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- {
- "channel_name": "CH84",
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- {
- "channel_name": "CH85",
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- {
- "channel_name": "CH86",
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- {
- "channel_name": "CH87",
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- {
- "channel_name": "CH88",
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- {
- "channel_name": "CH89",
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- {
- "channel_name": "CH90",
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- {
- "channel_name": "CH91",
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- {
- "channel_name": "CH92",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH93",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH94",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH95",
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- {
- "channel_name": "CH96",
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- {
- "channel_name": "CH97",
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- {
- "channel_name": "CH98",
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- {
- "channel_name": "CH99",
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- {
- "channel_name": "CH100",
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- },
- {
- "channel_name": "CH101",
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- {
- "channel_name": "CH102",
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- {
- "channel_name": "CH103",
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- {
- "channel_name": "CH104",
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- {
- "channel_name": "CH105",
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- {
- "channel_name": "CH106",
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- {
- "channel_name": "CH107",
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- {
- "channel_name": "CH108",
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- {
- "channel_name": "CH109",
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- {
- "channel_name": "CH110",
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- {
- "channel_name": "CH111",
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- {
- "channel_name": "CH112",
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- {
- "channel_name": "CH113",
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- {
- "channel_name": "CH114",
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- {
- "channel_name": "CH115",
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- {
- "channel_name": "CH116",
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- {
- "channel_name": "CH117",
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- {
- "channel_name": "CH118",
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- {
- "channel_name": "CH119",
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- {
- "channel_name": "CH120",
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- {
- "channel_name": "CH121",
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- {
- "channel_name": "CH122",
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- {
- "channel_name": "CH123",
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- {
- "channel_name": "CH124",
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- {
- "channel_name": "CH125",
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- {
- "channel_name": "CH126",
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- {
- "channel_name": "CH127",
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- {
- "channel_name": "CH128",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH129",
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- {
- "channel_name": "CH130",
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- {
- "channel_name": "CH131",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH132",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH133",
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- {
- "channel_name": "CH134",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH135",
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- {
- "channel_name": "CH136",
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- {
- "channel_name": "CH137",
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- {
- "channel_name": "CH138",
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- {
- "channel_name": "CH139",
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- {
- "channel_name": "CH140",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH141",
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- {
- "channel_name": "CH142",
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- {
- "channel_name": "CH143",
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- {
- "channel_name": "CH144",
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- {
- "channel_name": "CH145",
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- {
- "channel_name": "CH146",
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- {
- "channel_name": "CH147",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH148",
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- {
- "channel_name": "CH149",
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- {
- "channel_name": "CH150",
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- {
- "channel_name": "CH151",
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- {
- "channel_name": "CH152",
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- {
- "channel_name": "CH153",
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- {
- "channel_name": "CH154",
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- {
- "channel_name": "CH155",
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- {
- "channel_name": "CH156",
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- {
- "channel_name": "CH157",
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- {
- "channel_name": "CH158",
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- {
- "channel_name": "CH159",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH160",
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- {
- "channel_name": "CH161",
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- {
- "channel_name": "CH162",
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- {
- "channel_name": "CH163",
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- {
- "channel_name": "CH164",
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- {
- "channel_name": "CH165",
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- {
- "channel_name": "CH166",
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- },
- {
- "channel_name": "CH167",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
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- },
- {
- "channel_name": "CH168",
- "description": "Neuropixels electrode",
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- {
- "channel_name": "CH169",
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- {
- "channel_name": "CH170",
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- {
- "channel_name": "CH171",
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- {
- "channel_name": "CH172",
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- {
- "channel_name": "CH173",
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- {
- "channel_name": "CH174",
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- {
- "channel_name": "CH175",
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- {
- "channel_name": "CH176",
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- {
- "channel_name": "CH177",
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- {
- "channel_name": "CH178",
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- {
- "channel_name": "CH179",
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- {
- "channel_name": "CH180",
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- {
- "channel_name": "CH181",
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- {
- "channel_name": "CH182",
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- {
- "channel_name": "CH183",
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- {
- "channel_name": "CH184",
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- {
- "channel_name": "CH185",
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- {
- "channel_name": "CH186",
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- {
- "channel_name": "CH187",
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- {
- "channel_name": "CH188",
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- {
- "channel_name": "CH189",
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- {
- "channel_name": "CH190",
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- {
- "channel_name": "CH191",
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- {
- "channel_name": "CH192",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH193",
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- },
- {
- "channel_name": "CH194",
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- {
- "channel_name": "CH195",
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- },
- {
- "channel_name": "CH196",
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- },
- {
- "channel_name": "CH197",
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- {
- "channel_name": "CH198",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH199",
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- {
- "channel_name": "CH200",
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- {
- "channel_name": "CH201",
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- {
- "channel_name": "CH202",
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- {
- "channel_name": "CH203",
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- {
- "channel_name": "CH204",
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- {
- "channel_name": "CH205",
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- },
- {
- "channel_name": "CH206",
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- },
- {
- "channel_name": "CH207",
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- {
- "channel_name": "CH208",
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- },
- {
- "channel_name": "CH209",
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- {
- "channel_name": "CH210",
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- {
- "channel_name": "CH211",
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- {
- "channel_name": "CH212",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH213",
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- {
- "channel_name": "CH214",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH215",
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- {
- "channel_name": "CH216",
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- {
- "channel_name": "CH217",
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- {
- "channel_name": "CH218",
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- {
- "channel_name": "CH219",
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- {
- "channel_name": "CH220",
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- {
- "channel_name": "CH221",
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- {
- "channel_name": "CH222",
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- {
- "channel_name": "CH223",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH224",
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- {
- "channel_name": "CH225",
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- {
- "channel_name": "CH226",
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- {
- "channel_name": "CH227",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH228",
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- {
- "channel_name": "CH229",
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- {
- "channel_name": "CH230",
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- {
- "channel_name": "CH231",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH232",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH233",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH234",
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- {
- "channel_name": "CH235",
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- {
- "channel_name": "CH236",
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- {
- "channel_name": "CH237",
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- {
- "channel_name": "CH238",
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- {
- "channel_name": "CH239",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH240",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH241",
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- {
- "channel_name": "CH242",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH243",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH244",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH245",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
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- {
- "channel_name": "CH246",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH247",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH248",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH249",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH250",
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- {
- "channel_name": "CH251",
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- {
- "channel_name": "CH252",
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- {
- "channel_name": "CH253",
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- {
- "channel_name": "CH254",
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- },
- {
- "channel_name": "CH255",
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- {
- "channel_name": "CH256",
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- {
- "channel_name": "CH257",
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- {
- "channel_name": "CH258",
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- {
- "channel_name": "CH259",
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- {
- "channel_name": "CH260",
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- },
- {
- "channel_name": "CH261",
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- },
- {
- "channel_name": "CH262",
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- {
- "channel_name": "CH263",
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- {
- "channel_name": "CH264",
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- {
- "channel_name": "CH265",
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- {
- "channel_name": "CH266",
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- {
- "channel_name": "CH267",
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- {
- "channel_name": "CH268",
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- {
- "channel_name": "CH269",
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- {
- "channel_name": "CH270",
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- {
- "channel_name": "CH271",
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- {
- "channel_name": "CH272",
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- {
- "channel_name": "CH273",
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- {
- "channel_name": "CH274",
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- {
- "channel_name": "CH275",
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- {
- "channel_name": "CH276",
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- {
- "channel_name": "CH277",
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- {
- "channel_name": "CH278",
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- {
- "channel_name": "CH279",
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- {
- "channel_name": "CH280",
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- {
- "channel_name": "CH281",
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- {
- "channel_name": "CH282",
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- {
- "channel_name": "CH283",
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- {
- "channel_name": "CH284",
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- {
- "channel_name": "CH285",
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- {
- "channel_name": "CH286",
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- {
- "channel_name": "CH287",
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- {
- "channel_name": "CH288",
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- {
- "channel_name": "CH289",
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- {
- "channel_name": "CH290",
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- {
- "channel_name": "CH291",
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- {
- "channel_name": "CH292",
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- {
- "channel_name": "CH293",
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- {
- "channel_name": "CH294",
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- {
- "channel_name": "CH295",
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- {
- "channel_name": "CH296",
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- {
- "channel_name": "CH297",
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- {
- "channel_name": "CH298",
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- {
- "channel_name": "CH299",
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- {
- "channel_name": "CH300",
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- {
- "channel_name": "CH301",
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- {
- "channel_name": "CH302",
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- {
- "channel_name": "CH303",
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- {
- "channel_name": "CH304",
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- {
- "channel_name": "CH305",
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- {
- "channel_name": "CH306",
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- {
- "channel_name": "CH307",
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- {
- "channel_name": "CH308",
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- {
- "channel_name": "CH309",
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- {
- "channel_name": "CH310",
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- {
- "channel_name": "CH311",
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- {
- "channel_name": "CH312",
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- {
- "channel_name": "CH313",
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- {
- "channel_name": "CH314",
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- {
- "channel_name": "CH315",
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- {
- "channel_name": "CH316",
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- {
- "channel_name": "CH317",
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- {
- "channel_name": "CH318",
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- {
- "channel_name": "CH319",
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- {
- "channel_name": "CH320",
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- {
- "channel_name": "CH321",
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- {
- "channel_name": "CH322",
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- {
- "channel_name": "CH323",
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- {
- "channel_name": "CH324",
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- {
- "channel_name": "CH325",
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- {
- "channel_name": "CH326",
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- {
- "channel_name": "CH327",
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- {
- "channel_name": "CH328",
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- {
- "channel_name": "CH329",
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- {
- "channel_name": "CH330",
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- {
- "channel_name": "CH331",
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- {
- "channel_name": "CH332",
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- {
- "channel_name": "CH333",
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- {
- "channel_name": "CH334",
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- {
- "channel_name": "CH335",
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- {
- "channel_name": "CH336",
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- {
- "channel_name": "CH337",
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- {
- "channel_name": "CH338",
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- {
- "channel_name": "CH339",
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- {
- "channel_name": "CH340",
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- {
- "channel_name": "CH341",
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- {
- "channel_name": "CH342",
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- {
- "channel_name": "CH343",
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- {
- "channel_name": "CH344",
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- {
- "channel_name": "CH345",
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- {
- "channel_name": "CH346",
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- {
- "channel_name": "CH347",
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- {
- "channel_name": "CH348",
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- {
- "channel_name": "CH349",
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- {
- "channel_name": "CH350",
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- {
- "channel_name": "CH351",
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- {
- "channel_name": "CH352",
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- {
- "channel_name": "CH353",
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- {
- "channel_name": "CH354",
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- {
- "channel_name": "CH355",
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- {
- "channel_name": "CH356",
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- {
- "channel_name": "CH357",
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- {
- "channel_name": "CH358",
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- {
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- {
- "channel_name": "CH69",
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- {
- "channel_name": "CH70",
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- {
- "channel_name": "CH71",
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- {
- "channel_name": "CH72",
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- {
- "channel_name": "CH73",
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- {
- "channel_name": "CH74",
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- {
- "channel_name": "CH75",
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- {
- "channel_name": "CH76",
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- {
- "channel_name": "CH77",
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- {
- "channel_name": "CH78",
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- {
- "channel_name": "CH79",
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- {
- "channel_name": "CH80",
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- {
- "channel_name": "CH81",
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- {
- "channel_name": "CH82",
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- {
- "channel_name": "CH83",
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- {
- "channel_name": "CH84",
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- {
- "channel_name": "CH85",
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- {
- "channel_name": "CH86",
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- {
- "channel_name": "CH87",
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- {
- "channel_name": "CH88",
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- {
- "channel_name": "CH89",
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- {
- "channel_name": "CH90",
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- {
- "channel_name": "CH91",
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- {
- "channel_name": "CH92",
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- {
- "channel_name": "CH93",
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- {
- "channel_name": "CH94",
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- {
- "channel_name": "CH95",
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- {
- "channel_name": "CH96",
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- {
- "channel_name": "CH97",
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- {
- "channel_name": "CH98",
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- {
- "channel_name": "CH99",
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- {
- "channel_name": "CH100",
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- {
- "channel_name": "CH101",
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- {
- "channel_name": "CH102",
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- {
- "channel_name": "CH103",
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- {
- "channel_name": "CH104",
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- {
- "channel_name": "CH105",
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- {
- "channel_name": "CH106",
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- {
- "channel_name": "CH107",
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- {
- "channel_name": "CH108",
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- {
- "channel_name": "CH109",
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- {
- "channel_name": "CH110",
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- {
- "channel_name": "CH111",
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- {
- "channel_name": "CH112",
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- {
- "channel_name": "CH113",
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- {
- "channel_name": "CH114",
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- {
- "channel_name": "CH115",
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- {
- "channel_name": "CH116",
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- {
- "channel_name": "CH117",
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- {
- "channel_name": "CH118",
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- {
- "channel_name": "CH119",
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- {
- "channel_name": "CH120",
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- {
- "channel_name": "CH121",
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- {
- "channel_name": "CH122",
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- {
- "channel_name": "CH123",
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- {
- "channel_name": "CH124",
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- {
- "channel_name": "CH125",
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- {
- "channel_name": "CH126",
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- {
- "channel_name": "CH127",
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- {
- "channel_name": "CH128",
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- {
- "channel_name": "CH129",
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- {
- "channel_name": "CH130",
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- {
- "channel_name": "CH131",
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- {
- "channel_name": "CH132",
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- {
- "channel_name": "CH133",
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- {
- "channel_name": "CH134",
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- {
- "channel_name": "CH135",
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- {
- "channel_name": "CH136",
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- {
- "channel_name": "CH137",
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- {
- "channel_name": "CH138",
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- {
- "channel_name": "CH139",
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- {
- "channel_name": "CH140",
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- {
- "channel_name": "CH141",
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- {
- "channel_name": "CH142",
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- {
- "channel_name": "CH143",
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- {
- "channel_name": "CH144",
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- {
- "channel_name": "CH145",
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- {
- "channel_name": "CH146",
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- {
- "channel_name": "CH147",
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- {
- "channel_name": "CH148",
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- {
- "channel_name": "CH149",
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- {
- "channel_name": "CH150",
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- {
- "channel_name": "CH151",
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- {
- "channel_name": "CH152",
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- {
- "channel_name": "CH153",
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- {
- "channel_name": "CH154",
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- {
- "channel_name": "CH155",
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- {
- "channel_name": "CH156",
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- {
- "channel_name": "CH157",
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- {
- "channel_name": "CH158",
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- {
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- {
- "channel_name": "CH160",
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- {
- "channel_name": "CH161",
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- {
- "channel_name": "CH162",
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- {
- "channel_name": "CH163",
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- {
- "channel_name": "CH164",
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- {
- "channel_name": "CH165",
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- {
- "channel_name": "CH166",
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- {
- "channel_name": "CH167",
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- {
- "channel_name": "CH168",
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- {
- "channel_name": "CH169",
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- {
- "channel_name": "CH170",
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- {
- "channel_name": "CH171",
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- {
- "channel_name": "CH172",
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- {
- "channel_name": "CH173",
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- {
- "channel_name": "CH174",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH175",
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- {
- "channel_name": "CH176",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH177",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH178",
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- },
- {
- "channel_name": "CH179",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH180",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH181",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH182",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH183",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH184",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH185",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH186",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH187",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH188",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH189",
- "description": "Neuropixels electrode",
- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH190",
- "description": "Neuropixels electrode",
- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH191",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH192",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH193",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH194",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH195",
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- {
- "channel_name": "CH196",
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- {
- "channel_name": "CH197",
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- {
- "channel_name": "CH198",
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- {
- "channel_name": "CH199",
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- {
- "channel_name": "CH200",
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- {
- "channel_name": "CH201",
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- {
- "channel_name": "CH202",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH203",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH204",
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- },
- {
- "channel_name": "CH205",
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- {
- "channel_name": "CH206",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH207",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH208",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH209",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH210",
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- {
- "channel_name": "CH211",
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- {
- "channel_name": "CH212",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH213",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH214",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH215",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH216",
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- {
- "channel_name": "CH217",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH218",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH219",
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- {
- "channel_name": "CH220",
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- {
- "channel_name": "CH221",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH222",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH223",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH224",
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- {
- "channel_name": "CH225",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH226",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH227",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH228",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH229",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH230",
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- {
- "channel_name": "CH231",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH232",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH233",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH234",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH235",
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- {
- "channel_name": "CH236",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH237",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH238",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH239",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH240",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH241",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH242",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH243",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH244",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH245",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH246",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH247",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH248",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH249",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH250",
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- {
- "channel_name": "CH251",
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- {
- "channel_name": "CH252",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH253",
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- {
- "channel_name": "CH254",
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- },
- {
- "channel_name": "CH255",
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- },
- {
- "channel_name": "CH256",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
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- },
- {
- "channel_name": "CH257",
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- {
- "channel_name": "CH258",
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- {
- "channel_name": "CH259",
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- {
- "channel_name": "CH260",
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- {
- "channel_name": "CH261",
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- {
- "channel_name": "CH262",
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- {
- "channel_name": "CH263",
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- {
- "channel_name": "CH264",
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- {
- "channel_name": "CH265",
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- {
- "channel_name": "CH266",
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- {
- "channel_name": "CH267",
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- {
- "channel_name": "CH268",
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- {
- "channel_name": "CH269",
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- {
- "channel_name": "CH270",
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- {
- "channel_name": "CH271",
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- {
- "channel_name": "CH272",
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- {
- "channel_name": "CH273",
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- {
- "channel_name": "CH274",
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- {
- "channel_name": "CH275",
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- {
- "channel_name": "CH276",
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- {
- "channel_name": "CH277",
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- {
- "channel_name": "CH278",
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- {
- "channel_name": "CH279",
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- {
- "channel_name": "CH280",
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- {
- "channel_name": "CH281",
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- {
- "channel_name": "CH282",
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- {
- "channel_name": "CH283",
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- {
- "channel_name": "CH284",
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- {
- "channel_name": "CH285",
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- {
- "channel_name": "CH286",
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- {
- "channel_name": "CH287",
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- {
- "channel_name": "CH288",
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- {
- "channel_name": "CH289",
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- {
- "channel_name": "CH290",
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- {
- "channel_name": "CH291",
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- {
- "channel_name": "CH292",
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- {
- "channel_name": "CH293",
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- {
- "channel_name": "CH294",
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- {
- "channel_name": "CH295",
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- {
- "channel_name": "CH296",
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- {
- "channel_name": "CH297",
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- {
- "channel_name": "CH298",
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- {
- "channel_name": "CH299",
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- {
- "channel_name": "CH300",
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- {
- "channel_name": "CH301",
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- {
- "channel_name": "CH302",
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- {
- "channel_name": "CH303",
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- {
- "channel_name": "CH304",
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- {
- "channel_name": "CH305",
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- {
- "channel_name": "CH306",
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- {
- "channel_name": "CH307",
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- {
- "channel_name": "CH308",
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- {
- "channel_name": "CH309",
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- {
- "channel_name": "CH310",
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- {
- "channel_name": "CH311",
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- {
- "channel_name": "CH312",
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- {
- "channel_name": "CH313",
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- {
- "channel_name": "CH314",
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- {
- "channel_name": "CH315",
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- {
- "channel_name": "CH316",
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- {
- "channel_name": "CH317",
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- {
- "channel_name": "CH318",
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- {
- "channel_name": "CH319",
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- {
- "channel_name": "CH320",
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- {
- "channel_name": "CH321",
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- {
- "channel_name": "CH322",
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- {
- "channel_name": "CH323",
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- {
- "channel_name": "CH324",
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- {
- "channel_name": "CH325",
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- {
- "channel_name": "CH326",
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- {
- "channel_name": "CH327",
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- {
- "channel_name": "CH328",
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- {
- "channel_name": "CH329",
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- {
- "channel_name": "CH330",
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- {
- "channel_name": "CH331",
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- {
- "channel_name": "CH332",
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- {
- "channel_name": "CH333",
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- {
- "channel_name": "CH334",
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- {
- "channel_name": "CH335",
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- {
- "channel_name": "CH336",
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- {
- "channel_name": "CH337",
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- {
- "channel_name": "CH338",
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- {
- "channel_name": "CH339",
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- {
- "channel_name": "CH340",
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- {
- "channel_name": "CH341",
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- {
- "channel_name": "CH342",
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- {
- "channel_name": "CH343",
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- {
- "channel_name": "CH344",
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- {
- "channel_name": "CH345",
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- {
- "channel_name": "CH346",
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- {
- "channel_name": "CH347",
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- {
- "channel_name": "CH348",
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- {
- "channel_name": "CH349",
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- {
- "channel_name": "CH350",
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- {
- "channel_name": "CH351",
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- {
- "channel_name": "CH352",
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- {
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- {
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- {
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- {
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- "units": ""
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- {
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- },
- {
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- "units": ""
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- {
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH361",
- "description": "Neuropixels electrode",
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- "units": ""
- },
- {
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
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- "units": ""
- },
- {
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- {
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- {
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- {
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- "units": ""
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- {
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- "units": ""
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- {
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH370",
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- },
- {
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH372",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH373",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH374",
- "description": "Neuropixels electrode",
- "identifier": "",
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH375",
- "description": "Neuropixels electrode",
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH376",
- "description": "Neuropixels electrode",
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH377",
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
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- "units": ""
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- {
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- {
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- },
- {
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- "units": ""
- },
- {
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- "bit_volts": 0.1949999928474426,
- "units": ""
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- {
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- {
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- {
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- "units": ""
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- "units": ""
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- "units": ""
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- {
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- "units": ""
- },
- {
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- "description": "Analog Input channel from a NIDAQ device",
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- "units": ""
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- "events": [
- {
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- {
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- "sample_rate": 30000.0,
- "type": "int16",
- "source_processor": "Neuropix-PXI",
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- "initial_state": 0
- },
- {
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- "channel_name": "PXIe-6341Digital Input Line",
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- "identifier": "identifier",
- "sample_rate": 30000.0,
- "type": "int16",
- "source_processor": "NI-DAQmx",
- "stream_name": "PXIe-6341",
- "initial_state": 0
- },
- {
- "folder_name": "MessageCenter/",
- "channel_name": "Messages",
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- "identifier": "messagecenter.events",
- "sample_rate": 30000.0,
- "type": "string",
- "source_processor": "Message Center",
- "stream_name": "ProbeB"
- }
- ],
- "spikes": []
- }
\ No newline at end of file
diff --git a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment1/recording1/sync_messages.txt b/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment1/recording1/sync_messages.txt
deleted file mode 100644
index 3144d82..0000000
--- a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment1/recording1/sync_messages.txt
+++ /dev/null
@@ -1,4 +0,0 @@
-Software Time (milliseconds since midnight Jan 1st 1970 UTC): 1651600344618
-Start Time for Neuropix-PXI (100) - ProbeB @ 30000 Hz: 1863198
-Start Time for Neuropix-PXI (100) - ProbeC @ 30000 Hz: 1863781
-Start Time for NI-DAQmx (103) - PXIe-6341 @ 30000 Hz: 1867001
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diff --git a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment3/recording1/continuous/NI-DAQmx-103.PXIe-6341/timestamps.npy b/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment3/recording1/continuous/NI-DAQmx-103.PXIe-6341/timestamps.npy
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diff --git a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment3/recording1/continuous/Neuropix-PXI-100.ProbeB/continuous.dat b/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment3/recording1/continuous/Neuropix-PXI-100.ProbeB/continuous.dat
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diff --git a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment3/recording1/structure.oebin b/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment3/recording1/structure.oebin
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--- a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment3/recording1/structure.oebin
+++ /dev/null
@@ -1,6295 +0,0 @@
-{
- "GUI version": "0.6.0",
- "continuous": [
- {
- "folder_name": "Neuropix-PXI-100.ProbeB/",
- "sample_rate": 30000.0,
- "source_processor_name": "Neuropix-PXI",
- "source_processor_id": 100,
- "stream_name": "ProbeB",
- "recorded_processor": "Record Node",
- "recorded_processor_id": 101,
- "num_channels": 384,
- "channels": [
- {
- "channel_name": "CH1",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH2",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH3",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH4",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH5",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH6",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH7",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH8",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH9",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH10",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH11",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH12",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH13",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH14",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH15",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH16",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH17",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH18",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH19",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH20",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH21",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH22",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH23",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH24",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH25",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH26",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH27",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH28",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH29",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH30",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH31",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH32",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH33",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH34",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH35",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH36",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH37",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH38",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH39",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH40",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH41",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH42",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH43",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH44",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH45",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH46",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH47",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH48",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH49",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH50",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH51",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH52",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH53",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH54",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH55",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH56",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH57",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH58",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH59",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH60",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH61",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH62",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH63",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH64",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH65",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH66",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH67",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH68",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH69",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH70",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH71",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH72",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH73",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
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- {
- "channel_name": "CH74",
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- {
- "channel_name": "CH75",
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- {
- "channel_name": "CH76",
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- {
- "channel_name": "CH77",
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- {
- "channel_name": "CH78",
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- {
- "channel_name": "CH79",
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- {
- "channel_name": "CH80",
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- {
- "channel_name": "CH81",
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- {
- "channel_name": "CH82",
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- {
- "channel_name": "CH83",
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- {
- "channel_name": "CH84",
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- {
- "channel_name": "CH85",
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- {
- "channel_name": "CH86",
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- {
- "channel_name": "CH87",
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- {
- "channel_name": "CH88",
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- {
- "channel_name": "CH89",
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- {
- "channel_name": "CH90",
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- {
- "channel_name": "CH91",
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- {
- "channel_name": "CH92",
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- {
- "channel_name": "CH93",
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- {
- "channel_name": "CH94",
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- {
- "channel_name": "CH95",
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- {
- "channel_name": "CH96",
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- {
- "channel_name": "CH97",
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- {
- "channel_name": "CH98",
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- {
- "channel_name": "CH99",
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- {
- "channel_name": "CH100",
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- {
- "channel_name": "CH101",
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- {
- "channel_name": "CH102",
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- {
- "channel_name": "CH103",
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- {
- "channel_name": "CH104",
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- {
- "channel_name": "CH105",
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- {
- "channel_name": "CH106",
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- {
- "channel_name": "CH107",
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- {
- "channel_name": "CH108",
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- {
- "channel_name": "CH109",
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- {
- "channel_name": "CH110",
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- {
- "channel_name": "CH111",
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- {
- "channel_name": "CH112",
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- {
- "channel_name": "CH113",
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- {
- "channel_name": "CH114",
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- {
- "channel_name": "CH115",
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- {
- "channel_name": "CH116",
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- {
- "channel_name": "CH117",
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- {
- "channel_name": "CH118",
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- {
- "channel_name": "CH119",
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- {
- "channel_name": "CH120",
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- {
- "channel_name": "CH121",
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- {
- "channel_name": "CH122",
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- {
- "channel_name": "CH123",
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- {
- "channel_name": "CH124",
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- {
- "channel_name": "CH125",
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- {
- "channel_name": "CH126",
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- {
- "channel_name": "CH127",
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- {
- "channel_name": "CH128",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH129",
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- {
- "channel_name": "CH130",
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- {
- "channel_name": "CH131",
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- {
- "channel_name": "CH132",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH133",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH134",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH135",
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- {
- "channel_name": "CH136",
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- {
- "channel_name": "CH137",
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- {
- "channel_name": "CH138",
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- {
- "channel_name": "CH139",
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- {
- "channel_name": "CH140",
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- {
- "channel_name": "CH141",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH142",
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- {
- "channel_name": "CH143",
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- {
- "channel_name": "CH144",
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- {
- "channel_name": "CH145",
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- {
- "channel_name": "CH146",
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- {
- "channel_name": "CH147",
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- {
- "channel_name": "CH148",
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- {
- "channel_name": "CH149",
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- {
- "channel_name": "CH150",
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- {
- "channel_name": "CH151",
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- {
- "channel_name": "CH152",
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- {
- "channel_name": "CH153",
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- {
- "channel_name": "CH154",
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- {
- "channel_name": "CH155",
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- {
- "channel_name": "CH156",
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- {
- "channel_name": "CH157",
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- {
- "channel_name": "CH158",
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- {
- "channel_name": "CH159",
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- {
- "channel_name": "CH160",
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- {
- "channel_name": "CH161",
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- {
- "channel_name": "CH162",
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- {
- "channel_name": "CH163",
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- {
- "channel_name": "CH164",
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- {
- "channel_name": "CH165",
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- {
- "channel_name": "CH166",
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- },
- {
- "channel_name": "CH167",
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- },
- {
- "channel_name": "CH168",
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- {
- "channel_name": "CH169",
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- {
- "channel_name": "CH170",
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- {
- "channel_name": "CH171",
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- {
- "channel_name": "CH172",
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- {
- "channel_name": "CH173",
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- {
- "channel_name": "CH174",
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- {
- "channel_name": "CH175",
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- {
- "channel_name": "CH176",
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- {
- "channel_name": "CH177",
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- {
- "channel_name": "CH178",
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- {
- "channel_name": "CH179",
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- {
- "channel_name": "CH180",
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- {
- "channel_name": "CH181",
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- {
- "channel_name": "CH182",
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- {
- "channel_name": "CH183",
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- {
- "channel_name": "CH184",
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- {
- "channel_name": "CH185",
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- {
- "channel_name": "CH186",
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- {
- "channel_name": "CH187",
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- {
- "channel_name": "CH188",
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- {
- "channel_name": "CH189",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH190",
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- {
- "channel_name": "CH191",
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- {
- "channel_name": "CH192",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH193",
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- {
- "channel_name": "CH194",
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- {
- "channel_name": "CH195",
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- {
- "channel_name": "CH196",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH197",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH198",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH199",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH200",
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- {
- "channel_name": "CH201",
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- {
- "channel_name": "CH202",
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- {
- "channel_name": "CH203",
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- {
- "channel_name": "CH204",
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- {
- "channel_name": "CH205",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH206",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH207",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH208",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH209",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH210",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH211",
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- {
- "channel_name": "CH212",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH213",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH214",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH215",
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- {
- "channel_name": "CH216",
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- {
- "channel_name": "CH217",
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- {
- "channel_name": "CH218",
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- {
- "channel_name": "CH219",
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- {
- "channel_name": "CH220",
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- {
- "channel_name": "CH221",
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- {
- "channel_name": "CH222",
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- {
- "channel_name": "CH223",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH224",
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- {
- "channel_name": "CH225",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH226",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH227",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH228",
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- {
- "channel_name": "CH229",
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- {
- "channel_name": "CH230",
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- {
- "channel_name": "CH231",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH232",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH233",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH234",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH235",
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- {
- "channel_name": "CH236",
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- {
- "channel_name": "CH237",
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- {
- "channel_name": "CH238",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH239",
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- {
- "channel_name": "CH240",
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- {
- "channel_name": "CH241",
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- {
- "channel_name": "CH242",
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- {
- "channel_name": "CH243",
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- {
- "channel_name": "CH244",
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- {
- "channel_name": "CH245",
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- {
- "channel_name": "CH246",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH247",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH248",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH249",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH250",
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- {
- "channel_name": "CH251",
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- {
- "channel_name": "CH252",
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- {
- "channel_name": "CH253",
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- {
- "channel_name": "CH254",
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- {
- "channel_name": "CH255",
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- {
- "channel_name": "CH256",
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- {
- "channel_name": "CH257",
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- {
- "channel_name": "CH258",
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- {
- "channel_name": "CH259",
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- {
- "channel_name": "CH260",
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- {
- "channel_name": "CH261",
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- },
- {
- "channel_name": "CH262",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH263",
- "description": "Neuropixels electrode",
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- {
- "channel_name": "CH264",
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- {
- "channel_name": "CH265",
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- {
- "channel_name": "CH266",
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- {
- "channel_name": "CH267",
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- {
- "channel_name": "CH268",
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- {
- "channel_name": "CH269",
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- {
- "channel_name": "CH270",
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- {
- "channel_name": "CH271",
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- {
- "channel_name": "CH272",
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- {
- "channel_name": "CH273",
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- {
- "channel_name": "CH274",
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- {
- "channel_name": "CH275",
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- {
- "channel_name": "CH276",
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- {
- "channel_name": "CH277",
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- {
- "channel_name": "CH278",
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- {
- "channel_name": "CH279",
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- {
- "channel_name": "CH280",
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- {
- "channel_name": "CH281",
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- {
- "channel_name": "CH282",
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- {
- "channel_name": "CH283",
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- {
- "channel_name": "CH284",
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- {
- "channel_name": "CH285",
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- {
- "channel_name": "CH286",
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- {
- "channel_name": "CH287",
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- {
- "channel_name": "CH288",
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- {
- "channel_name": "CH289",
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- {
- "channel_name": "CH290",
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- {
- "channel_name": "CH291",
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- {
- "channel_name": "CH292",
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- {
- "channel_name": "CH293",
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- {
- "channel_name": "CH294",
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- {
- "channel_name": "CH295",
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- {
- "channel_name": "CH296",
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- {
- "channel_name": "CH297",
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- {
- "channel_name": "CH298",
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- {
- "channel_name": "CH299",
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- {
- "channel_name": "CH300",
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- {
- "channel_name": "CH301",
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- {
- "channel_name": "CH302",
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- {
- "channel_name": "CH303",
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- {
- "channel_name": "CH304",
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- {
- "channel_name": "CH305",
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- {
- "channel_name": "CH306",
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- {
- "channel_name": "CH307",
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- {
- "channel_name": "CH308",
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- {
- "channel_name": "CH309",
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- {
- "channel_name": "CH310",
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- {
- "channel_name": "CH311",
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- {
- "channel_name": "CH312",
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- {
- "channel_name": "CH313",
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- {
- "channel_name": "CH314",
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- {
- "channel_name": "CH315",
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- {
- "channel_name": "CH316",
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- {
- "channel_name": "CH317",
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- {
- "channel_name": "CH318",
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- {
- "channel_name": "CH319",
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- {
- "channel_name": "CH320",
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- {
- "channel_name": "CH321",
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- {
- "channel_name": "CH322",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH323",
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- {
- "channel_name": "CH324",
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- {
- "channel_name": "CH325",
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- {
- "channel_name": "CH326",
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- {
- "channel_name": "CH327",
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- {
- "channel_name": "CH328",
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- {
- "channel_name": "CH329",
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- {
- "channel_name": "CH330",
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- {
- "channel_name": "CH331",
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- {
- "channel_name": "CH332",
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- {
- "channel_name": "CH333",
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- {
- "channel_name": "CH334",
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- {
- "channel_name": "CH335",
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- {
- "channel_name": "CH336",
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- {
- "channel_name": "CH337",
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- {
- "channel_name": "CH338",
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- {
- "channel_name": "CH339",
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- {
- "channel_name": "CH340",
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- {
- "channel_name": "CH341",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH342",
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- {
- "channel_name": "CH343",
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- {
- "channel_name": "CH344",
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- {
- "channel_name": "CH345",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH346",
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- {
- "channel_name": "CH347",
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- {
- "channel_name": "CH348",
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- {
- "channel_name": "CH349",
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- {
- "channel_name": "CH350",
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- {
- "channel_name": "CH351",
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- {
- "channel_name": "CH352",
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- {
- "channel_name": "CH353",
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- {
- "channel_name": "CH354",
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- {
- "channel_name": "CH355",
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- {
- "channel_name": "CH356",
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- {
- "channel_name": "CH357",
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- {
- "channel_name": "CH358",
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- {
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- {
- "channel_name": "CH69",
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- {
- "channel_name": "CH70",
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- {
- "channel_name": "CH71",
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- {
- "channel_name": "CH72",
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- {
- "channel_name": "CH73",
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- {
- "channel_name": "CH74",
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- {
- "channel_name": "CH75",
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- {
- "channel_name": "CH76",
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- {
- "channel_name": "CH77",
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- {
- "channel_name": "CH78",
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- {
- "channel_name": "CH79",
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- {
- "channel_name": "CH80",
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- {
- "channel_name": "CH81",
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- {
- "channel_name": "CH82",
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- {
- "channel_name": "CH83",
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- {
- "channel_name": "CH84",
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- {
- "channel_name": "CH85",
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- {
- "channel_name": "CH86",
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- {
- "channel_name": "CH87",
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- {
- "channel_name": "CH88",
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- {
- "channel_name": "CH89",
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- {
- "channel_name": "CH90",
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- {
- "channel_name": "CH91",
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- {
- "channel_name": "CH92",
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- {
- "channel_name": "CH93",
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- {
- "channel_name": "CH94",
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- {
- "channel_name": "CH95",
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- {
- "channel_name": "CH96",
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- {
- "channel_name": "CH97",
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- {
- "channel_name": "CH98",
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- {
- "channel_name": "CH99",
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- {
- "channel_name": "CH100",
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- {
- "channel_name": "CH101",
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- {
- "channel_name": "CH102",
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- {
- "channel_name": "CH103",
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- {
- "channel_name": "CH104",
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- {
- "channel_name": "CH105",
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- {
- "channel_name": "CH106",
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- {
- "channel_name": "CH107",
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- {
- "channel_name": "CH108",
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- {
- "channel_name": "CH109",
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- {
- "channel_name": "CH110",
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- {
- "channel_name": "CH111",
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- {
- "channel_name": "CH112",
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- {
- "channel_name": "CH113",
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- {
- "channel_name": "CH114",
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- {
- "channel_name": "CH115",
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- {
- "channel_name": "CH116",
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- {
- "channel_name": "CH117",
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- {
- "channel_name": "CH118",
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- {
- "channel_name": "CH119",
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- {
- "channel_name": "CH120",
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- {
- "channel_name": "CH121",
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- {
- "channel_name": "CH122",
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- {
- "channel_name": "CH123",
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- {
- "channel_name": "CH124",
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- {
- "channel_name": "CH125",
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- {
- "channel_name": "CH126",
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- {
- "channel_name": "CH127",
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- {
- "channel_name": "CH128",
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- {
- "channel_name": "CH129",
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- {
- "channel_name": "CH130",
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- {
- "channel_name": "CH131",
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- {
- "channel_name": "CH132",
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- {
- "channel_name": "CH133",
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- {
- "channel_name": "CH134",
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- {
- "channel_name": "CH135",
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- {
- "channel_name": "CH136",
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- {
- "channel_name": "CH137",
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- {
- "channel_name": "CH138",
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- {
- "channel_name": "CH139",
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- {
- "channel_name": "CH140",
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- {
- "channel_name": "CH141",
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- {
- "channel_name": "CH142",
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- {
- "channel_name": "CH143",
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- {
- "channel_name": "CH144",
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- {
- "channel_name": "CH145",
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- {
- "channel_name": "CH146",
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- {
- "channel_name": "CH147",
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- {
- "channel_name": "CH148",
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- {
- "channel_name": "CH149",
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- {
- "channel_name": "CH150",
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- {
- "channel_name": "CH151",
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- {
- "channel_name": "CH152",
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- {
- "channel_name": "CH153",
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- {
- "channel_name": "CH154",
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- {
- "channel_name": "CH155",
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- {
- "channel_name": "CH156",
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- {
- "channel_name": "CH157",
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- {
- "channel_name": "CH158",
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- {
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- {
- "channel_name": "CH160",
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- {
- "channel_name": "CH161",
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- {
- "channel_name": "CH162",
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- {
- "channel_name": "CH163",
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- {
- "channel_name": "CH164",
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- {
- "channel_name": "CH165",
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- {
- "channel_name": "CH166",
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- {
- "channel_name": "CH167",
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- {
- "channel_name": "CH168",
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- {
- "channel_name": "CH169",
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- {
- "channel_name": "CH170",
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- {
- "channel_name": "CH171",
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- {
- "channel_name": "CH172",
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- {
- "channel_name": "CH173",
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- {
- "channel_name": "CH174",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH175",
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- {
- "channel_name": "CH176",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH177",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH178",
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- },
- {
- "channel_name": "CH179",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH180",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH181",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH182",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH183",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH184",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH185",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH186",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH187",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH188",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH189",
- "description": "Neuropixels electrode",
- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH190",
- "description": "Neuropixels electrode",
- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH191",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH192",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH193",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH194",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH195",
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- {
- "channel_name": "CH196",
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- {
- "channel_name": "CH197",
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- {
- "channel_name": "CH198",
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- {
- "channel_name": "CH199",
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- {
- "channel_name": "CH200",
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- {
- "channel_name": "CH201",
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- {
- "channel_name": "CH202",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH203",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH204",
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- },
- {
- "channel_name": "CH205",
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- {
- "channel_name": "CH206",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH207",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH208",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH209",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH210",
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- {
- "channel_name": "CH211",
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- {
- "channel_name": "CH212",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH213",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH214",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH215",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH216",
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- {
- "channel_name": "CH217",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH218",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH219",
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- {
- "channel_name": "CH220",
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- {
- "channel_name": "CH221",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH222",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH223",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH224",
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- {
- "channel_name": "CH225",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH226",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH227",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH228",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH229",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH230",
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- {
- "channel_name": "CH231",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH232",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH233",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH234",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH235",
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- {
- "channel_name": "CH236",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH237",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH238",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH239",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH240",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH241",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH242",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH243",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH244",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH245",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH246",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH247",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH248",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH249",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH250",
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- {
- "channel_name": "CH251",
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- {
- "channel_name": "CH252",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH253",
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- {
- "channel_name": "CH254",
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- },
- {
- "channel_name": "CH255",
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- },
- {
- "channel_name": "CH256",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
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- },
- {
- "channel_name": "CH257",
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- {
- "channel_name": "CH258",
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- {
- "channel_name": "CH259",
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- {
- "channel_name": "CH260",
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- {
- "channel_name": "CH261",
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- {
- "channel_name": "CH262",
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- {
- "channel_name": "CH263",
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- {
- "channel_name": "CH264",
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- {
- "channel_name": "CH265",
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- {
- "channel_name": "CH266",
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- {
- "channel_name": "CH267",
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- {
- "channel_name": "CH268",
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- {
- "channel_name": "CH269",
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- {
- "channel_name": "CH270",
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- {
- "channel_name": "CH271",
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- {
- "channel_name": "CH272",
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- {
- "channel_name": "CH273",
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- {
- "channel_name": "CH274",
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- {
- "channel_name": "CH275",
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- {
- "channel_name": "CH276",
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- {
- "channel_name": "CH277",
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- {
- "channel_name": "CH278",
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- {
- "channel_name": "CH279",
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- {
- "channel_name": "CH280",
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- {
- "channel_name": "CH281",
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- {
- "channel_name": "CH282",
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- {
- "channel_name": "CH283",
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- {
- "channel_name": "CH284",
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- {
- "channel_name": "CH285",
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- {
- "channel_name": "CH286",
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- {
- "channel_name": "CH287",
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- {
- "channel_name": "CH288",
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- {
- "channel_name": "CH289",
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- {
- "channel_name": "CH290",
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- {
- "channel_name": "CH291",
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- {
- "channel_name": "CH292",
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- {
- "channel_name": "CH293",
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- {
- "channel_name": "CH294",
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- {
- "channel_name": "CH295",
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- {
- "channel_name": "CH296",
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- {
- "channel_name": "CH297",
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- {
- "channel_name": "CH298",
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- {
- "channel_name": "CH299",
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- {
- "channel_name": "CH300",
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- {
- "channel_name": "CH301",
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- {
- "channel_name": "CH302",
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- {
- "channel_name": "CH303",
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- {
- "channel_name": "CH304",
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- {
- "channel_name": "CH305",
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- {
- "channel_name": "CH306",
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- {
- "channel_name": "CH307",
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- {
- "channel_name": "CH308",
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- {
- "channel_name": "CH309",
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- {
- "channel_name": "CH310",
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- {
- "channel_name": "CH311",
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- {
- "channel_name": "CH312",
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- {
- "channel_name": "CH313",
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- {
- "channel_name": "CH314",
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- {
- "channel_name": "CH315",
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- {
- "channel_name": "CH316",
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- {
- "channel_name": "CH317",
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- {
- "channel_name": "CH318",
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- {
- "channel_name": "CH319",
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- {
- "channel_name": "CH320",
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- {
- "channel_name": "CH321",
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- {
- "channel_name": "CH322",
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- {
- "channel_name": "CH323",
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- {
- "channel_name": "CH324",
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- {
- "channel_name": "CH325",
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- {
- "channel_name": "CH326",
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- {
- "channel_name": "CH327",
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- {
- "channel_name": "CH328",
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- {
- "channel_name": "CH329",
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- {
- "channel_name": "CH330",
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- {
- "channel_name": "CH331",
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- {
- "channel_name": "CH332",
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- {
- "channel_name": "CH333",
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- {
- "channel_name": "CH334",
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- {
- "channel_name": "CH335",
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- {
- "channel_name": "CH336",
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- {
- "channel_name": "CH337",
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- {
- "channel_name": "CH338",
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- {
- "channel_name": "CH339",
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- {
- "channel_name": "CH340",
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- {
- "channel_name": "CH341",
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- {
- "channel_name": "CH342",
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- {
- "channel_name": "CH343",
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- {
- "channel_name": "CH344",
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- {
- "channel_name": "CH345",
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- {
- "channel_name": "CH346",
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- {
- "channel_name": "CH347",
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- {
- "channel_name": "CH348",
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- {
- "channel_name": "CH349",
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- {
- "channel_name": "CH350",
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- {
- "channel_name": "CH351",
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- {
- "channel_name": "CH352",
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- {
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- {
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- {
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- {
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- {
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- "units": ""
- },
- {
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- "description": "Neuropixels electrode",
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
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- "description": "Neuropixels electrode",
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH361",
- "description": "Neuropixels electrode",
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- "bit_volts": 0.1949999928474426,
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- },
- {
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH363",
- "description": "Neuropixels electrode",
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
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- {
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- },
- {
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- "units": ""
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- {
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- {
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- {
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH370",
- "description": "Neuropixels electrode",
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH372",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH373",
- "description": "Neuropixels electrode",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
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- "description": "Neuropixels electrode",
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH375",
- "description": "Neuropixels electrode",
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH376",
- "description": "Neuropixels electrode",
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- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
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- "units": ""
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- {
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- {
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- {
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- {
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- "units": ""
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- {
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- "bit_volts": 0.1949999928474426,
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- },
- {
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- {
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- "bit_volts": 0.1949999928474426,
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- {
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- "source_processor_name": "NI-DAQmx",
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- {
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- "units": ""
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- "units": ""
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- "units": ""
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- {
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- "units": ""
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- {
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- "description": "Analog Input channel from a NIDAQ device",
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- "units": ""
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- {
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- {
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- "sample_rate": 30000.0,
- "type": "int16",
- "source_processor": "Neuropix-PXI",
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- "initial_state": 0
- },
- {
- "folder_name": "NI-DAQmx-103.PXIe-6341/TTL/",
- "channel_name": "PXIe-6341Digital Input Line",
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- "identifier": "identifier",
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- "type": "int16",
- "source_processor": "NI-DAQmx",
- "stream_name": "PXIe-6341",
- "initial_state": 0
- },
- {
- "folder_name": "MessageCenter/",
- "channel_name": "Messages",
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- "identifier": "messagecenter.events",
- "sample_rate": 30000.0,
- "type": "string",
- "source_processor": "Message Center",
- "stream_name": "ProbeB"
- }
- ],
- "spikes": []
- }
\ No newline at end of file
diff --git a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment3/recording1/sync_messages.txt b/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment3/recording1/sync_messages.txt
deleted file mode 100644
index 6a8dc52..0000000
--- a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment3/recording1/sync_messages.txt
+++ /dev/null
@@ -1,4 +0,0 @@
-Software Time (milliseconds since midnight Jan 1st 1970 UTC): 1651601395234
-Start Time for Neuropix-PXI (100) - ProbeB @ 30000 Hz: 174889
-Start Time for Neuropix-PXI (100) - ProbeC @ 30000 Hz: 174890
-Start Time for NI-DAQmx (103) - PXIe-6341 @ 30000 Hz: 187001
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diff --git a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment6/recording1/continuous/NI-DAQmx-103.PXIe-6341/timestamps.npy b/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment6/recording1/continuous/NI-DAQmx-103.PXIe-6341/timestamps.npy
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diff --git a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment6/recording1/continuous/Neuropix-PXI-100.ProbeB/continuous.dat b/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment6/recording1/continuous/Neuropix-PXI-100.ProbeB/continuous.dat
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diff --git a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment6/recording1/structure.oebin b/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment6/recording1/structure.oebin
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index 3bfe5c2..0000000
--- a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment6/recording1/structure.oebin
+++ /dev/null
@@ -1,6295 +0,0 @@
-{
- "GUI version": "0.6.0",
- "continuous": [
- {
- "folder_name": "Neuropix-PXI-100.ProbeB/",
- "sample_rate": 30000.0,
- "source_processor_name": "Neuropix-PXI",
- "source_processor_id": 100,
- "stream_name": "ProbeB",
- "recorded_processor": "Record Node",
- "recorded_processor_id": 101,
- "num_channels": 384,
- "channels": [
- {
- "channel_name": "CH1",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH2",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH3",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH4",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH5",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH6",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH7",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH8",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH9",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH10",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH11",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH12",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH13",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH14",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH15",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH16",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH17",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH18",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH19",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH20",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH21",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH22",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH23",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH24",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH25",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH26",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH27",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH28",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH29",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH30",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH31",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH32",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH33",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH34",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH35",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH36",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH37",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH38",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH39",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH40",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH41",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH42",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH43",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH44",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH45",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH46",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH47",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH48",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH49",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH50",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH51",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH52",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH53",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH54",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH55",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH56",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH57",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH58",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH59",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH60",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH61",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH62",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH63",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH64",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH65",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH66",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH67",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH68",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH69",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH70",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH71",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH72",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH73",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
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- {
- "channel_name": "CH75",
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- {
- "channel_name": "CH76",
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- {
- "channel_name": "CH77",
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- {
- "channel_name": "CH78",
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- {
- "channel_name": "CH79",
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- {
- "channel_name": "CH80",
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- {
- "channel_name": "CH81",
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- {
- "channel_name": "CH82",
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- {
- "channel_name": "CH83",
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- {
- "channel_name": "CH84",
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- {
- "channel_name": "CH85",
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- {
- "channel_name": "CH86",
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- {
- "channel_name": "CH87",
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- {
- "channel_name": "CH88",
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- {
- "channel_name": "CH89",
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- {
- "channel_name": "CH90",
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- {
- "channel_name": "CH91",
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- {
- "channel_name": "CH92",
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- {
- "channel_name": "CH93",
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- {
- "channel_name": "CH94",
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- {
- "channel_name": "CH95",
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- {
- "channel_name": "CH96",
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- {
- "channel_name": "CH97",
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- {
- "channel_name": "CH98",
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- {
- "channel_name": "CH99",
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- {
- "channel_name": "CH100",
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- {
- "channel_name": "CH101",
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- {
- "channel_name": "CH102",
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- {
- "channel_name": "CH103",
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- {
- "channel_name": "CH104",
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- {
- "channel_name": "CH105",
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- {
- "channel_name": "CH106",
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- {
- "channel_name": "CH107",
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- {
- "channel_name": "CH108",
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- {
- "channel_name": "CH109",
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- {
- "channel_name": "CH110",
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- {
- "channel_name": "CH111",
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- {
- "channel_name": "CH112",
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- {
- "channel_name": "CH113",
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- {
- "channel_name": "CH114",
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- {
- "channel_name": "CH115",
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- {
- "channel_name": "CH116",
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- {
- "channel_name": "CH117",
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- {
- "channel_name": "CH118",
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- {
- "channel_name": "CH119",
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- {
- "channel_name": "CH120",
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- {
- "channel_name": "CH121",
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- {
- "channel_name": "CH122",
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- {
- "channel_name": "CH123",
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- {
- "channel_name": "CH124",
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- {
- "channel_name": "CH125",
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- {
- "channel_name": "CH126",
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- {
- "channel_name": "CH127",
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- {
- "channel_name": "CH128",
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- {
- "channel_name": "CH129",
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- {
- "channel_name": "CH130",
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- {
- "channel_name": "CH131",
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- {
- "channel_name": "CH132",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH133",
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- {
- "channel_name": "CH134",
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- {
- "channel_name": "CH135",
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- {
- "channel_name": "CH136",
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- {
- "channel_name": "CH137",
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- {
- "channel_name": "CH138",
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- {
- "channel_name": "CH139",
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- {
- "channel_name": "CH140",
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- {
- "channel_name": "CH141",
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- {
- "channel_name": "CH142",
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- {
- "channel_name": "CH143",
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- {
- "channel_name": "CH144",
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- {
- "channel_name": "CH145",
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- {
- "channel_name": "CH146",
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- {
- "channel_name": "CH147",
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- {
- "channel_name": "CH148",
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- {
- "channel_name": "CH149",
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- {
- "channel_name": "CH150",
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- {
- "channel_name": "CH151",
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- {
- "channel_name": "CH152",
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- {
- "channel_name": "CH153",
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- {
- "channel_name": "CH154",
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- {
- "channel_name": "CH155",
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- {
- "channel_name": "CH156",
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- {
- "channel_name": "CH157",
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- {
- "channel_name": "CH158",
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- {
- "channel_name": "CH159",
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- {
- "channel_name": "CH160",
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- {
- "channel_name": "CH161",
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- {
- "channel_name": "CH162",
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- {
- "channel_name": "CH163",
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- {
- "channel_name": "CH164",
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- {
- "channel_name": "CH165",
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- {
- "channel_name": "CH166",
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- {
- "channel_name": "CH167",
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- },
- {
- "channel_name": "CH168",
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- {
- "channel_name": "CH169",
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- {
- "channel_name": "CH170",
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- {
- "channel_name": "CH171",
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- {
- "channel_name": "CH172",
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- {
- "channel_name": "CH173",
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- {
- "channel_name": "CH174",
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- {
- "channel_name": "CH175",
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- {
- "channel_name": "CH176",
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- },
- {
- "channel_name": "CH177",
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- },
- {
- "channel_name": "CH178",
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- },
- {
- "channel_name": "CH179",
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- },
- {
- "channel_name": "CH180",
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- },
- {
- "channel_name": "CH181",
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- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH182",
- "description": "Neuropixels electrode",
- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH183",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH184",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH185",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH186",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH187",
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- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH188",
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- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH189",
- "description": "Neuropixels electrode",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH190",
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- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH191",
- "description": "Neuropixels electrode",
- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH192",
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- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH193",
- "description": "Neuropixels electrode",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH194",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH195",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH196",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH197",
- "description": "Neuropixels electrode",
- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH198",
- "description": "Neuropixels electrode",
- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH199",
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- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH200",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH201",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH202",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH203",
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- {
- "channel_name": "CH204",
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- {
- "channel_name": "CH205",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH206",
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- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH207",
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- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH208",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH209",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH210",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH211",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH212",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH213",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH214",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH215",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH216",
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- {
- "channel_name": "CH217",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH218",
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- {
- "channel_name": "CH219",
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- {
- "channel_name": "CH220",
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- {
- "channel_name": "CH221",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH222",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH223",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH224",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH225",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH226",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH227",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH228",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH229",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH230",
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- {
- "channel_name": "CH231",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH232",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH233",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH234",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH235",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH236",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH237",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH238",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH239",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH240",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH241",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH242",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH243",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH244",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH245",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH246",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH247",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH248",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH249",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH250",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH251",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH252",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH253",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH254",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH255",
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- {
- "channel_name": "CH256",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH257",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH258",
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- {
- "channel_name": "CH259",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH260",
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- },
- {
- "channel_name": "CH261",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
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- },
- {
- "channel_name": "CH262",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH263",
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- {
- "channel_name": "CH264",
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- {
- "channel_name": "CH265",
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- {
- "channel_name": "CH266",
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- {
- "channel_name": "CH267",
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- {
- "channel_name": "CH268",
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- {
- "channel_name": "CH269",
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- {
- "channel_name": "CH270",
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- {
- "channel_name": "CH271",
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- {
- "channel_name": "CH272",
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- {
- "channel_name": "CH273",
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- {
- "channel_name": "CH274",
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- {
- "channel_name": "CH275",
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- {
- "channel_name": "CH276",
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- {
- "channel_name": "CH277",
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- {
- "channel_name": "CH278",
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- {
- "channel_name": "CH279",
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- {
- "channel_name": "CH280",
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- {
- "channel_name": "CH281",
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- {
- "channel_name": "CH282",
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- {
- "channel_name": "CH283",
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- {
- "channel_name": "CH284",
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- {
- "channel_name": "CH285",
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- {
- "channel_name": "CH286",
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- {
- "channel_name": "CH287",
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- {
- "channel_name": "CH288",
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- {
- "channel_name": "CH289",
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- {
- "channel_name": "CH290",
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- {
- "channel_name": "CH291",
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- {
- "channel_name": "CH292",
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- {
- "channel_name": "CH293",
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- {
- "channel_name": "CH294",
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- {
- "channel_name": "CH295",
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- {
- "channel_name": "CH296",
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- {
- "channel_name": "CH297",
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- {
- "channel_name": "CH298",
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- {
- "channel_name": "CH299",
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- {
- "channel_name": "CH300",
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- {
- "channel_name": "CH301",
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- {
- "channel_name": "CH302",
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- {
- "channel_name": "CH303",
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- {
- "channel_name": "CH304",
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- {
- "channel_name": "CH305",
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- {
- "channel_name": "CH306",
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- {
- "channel_name": "CH307",
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- {
- "channel_name": "CH308",
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- {
- "channel_name": "CH309",
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- {
- "channel_name": "CH310",
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- {
- "channel_name": "CH311",
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- {
- "channel_name": "CH312",
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- {
- "channel_name": "CH313",
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- {
- "channel_name": "CH314",
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- {
- "channel_name": "CH315",
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- {
- "channel_name": "CH316",
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- {
- "channel_name": "CH317",
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- {
- "channel_name": "CH318",
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- {
- "channel_name": "CH319",
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- {
- "channel_name": "CH320",
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- {
- "channel_name": "CH321",
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- {
- "channel_name": "CH322",
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- {
- "channel_name": "CH323",
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- {
- "channel_name": "CH324",
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- {
- "channel_name": "CH325",
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- {
- "channel_name": "CH326",
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- {
- "channel_name": "CH327",
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- {
- "channel_name": "CH328",
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- {
- "channel_name": "CH329",
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- {
- "channel_name": "CH330",
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- {
- "channel_name": "CH331",
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- {
- "channel_name": "CH332",
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- {
- "channel_name": "CH333",
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- {
- "channel_name": "CH334",
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- {
- "channel_name": "CH335",
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- {
- "channel_name": "CH336",
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- {
- "channel_name": "CH337",
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- {
- "channel_name": "CH338",
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- {
- "channel_name": "CH339",
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- {
- "channel_name": "CH340",
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- {
- "channel_name": "CH341",
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- {
- "channel_name": "CH342",
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- {
- "channel_name": "CH343",
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- {
- "channel_name": "CH344",
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- {
- "channel_name": "CH345",
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- {
- "channel_name": "CH346",
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- {
- "channel_name": "CH347",
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- {
- "channel_name": "CH348",
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- {
- "channel_name": "CH349",
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- {
- "channel_name": "CH350",
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- {
- "channel_name": "CH351",
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- {
- "channel_name": "CH352",
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- {
- "channel_name": "CH353",
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- {
- "channel_name": "CH354",
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- {
- "channel_name": "CH355",
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- {
- "channel_name": "CH356",
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- {
- "channel_name": "CH357",
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- {
- "channel_name": "CH358",
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- {
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- {
- "channel_name": "CH69",
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- {
- "channel_name": "CH70",
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- {
- "channel_name": "CH71",
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- {
- "channel_name": "CH72",
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- {
- "channel_name": "CH73",
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- {
- "channel_name": "CH74",
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- {
- "channel_name": "CH75",
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- {
- "channel_name": "CH76",
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- {
- "channel_name": "CH77",
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- {
- "channel_name": "CH78",
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- {
- "channel_name": "CH79",
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- {
- "channel_name": "CH80",
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- {
- "channel_name": "CH81",
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- {
- "channel_name": "CH82",
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- {
- "channel_name": "CH83",
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- {
- "channel_name": "CH84",
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- {
- "channel_name": "CH85",
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- {
- "channel_name": "CH86",
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- {
- "channel_name": "CH87",
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- {
- "channel_name": "CH88",
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- {
- "channel_name": "CH89",
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- {
- "channel_name": "CH90",
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- {
- "channel_name": "CH91",
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- {
- "channel_name": "CH92",
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- {
- "channel_name": "CH93",
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- {
- "channel_name": "CH94",
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- {
- "channel_name": "CH95",
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- {
- "channel_name": "CH96",
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- {
- "channel_name": "CH97",
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- {
- "channel_name": "CH98",
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- {
- "channel_name": "CH99",
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- {
- "channel_name": "CH100",
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- {
- "channel_name": "CH101",
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- {
- "channel_name": "CH102",
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- {
- "channel_name": "CH103",
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- {
- "channel_name": "CH104",
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- {
- "channel_name": "CH105",
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- {
- "channel_name": "CH106",
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- {
- "channel_name": "CH107",
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- {
- "channel_name": "CH108",
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- {
- "channel_name": "CH109",
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- {
- "channel_name": "CH110",
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- {
- "channel_name": "CH111",
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- {
- "channel_name": "CH112",
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- {
- "channel_name": "CH113",
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- {
- "channel_name": "CH114",
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- {
- "channel_name": "CH115",
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- {
- "channel_name": "CH116",
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- {
- "channel_name": "CH117",
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- {
- "channel_name": "CH118",
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- {
- "channel_name": "CH119",
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- {
- "channel_name": "CH120",
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- {
- "channel_name": "CH121",
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- {
- "channel_name": "CH122",
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- {
- "channel_name": "CH123",
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- {
- "channel_name": "CH124",
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- {
- "channel_name": "CH125",
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- {
- "channel_name": "CH126",
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- {
- "channel_name": "CH127",
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- {
- "channel_name": "CH128",
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- {
- "channel_name": "CH129",
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- {
- "channel_name": "CH130",
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- {
- "channel_name": "CH131",
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- {
- "channel_name": "CH132",
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- {
- "channel_name": "CH133",
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- {
- "channel_name": "CH134",
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- {
- "channel_name": "CH135",
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- {
- "channel_name": "CH136",
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- {
- "channel_name": "CH137",
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- {
- "channel_name": "CH138",
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- {
- "channel_name": "CH139",
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- {
- "channel_name": "CH140",
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- {
- "channel_name": "CH141",
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- {
- "channel_name": "CH142",
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- {
- "channel_name": "CH143",
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- {
- "channel_name": "CH144",
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- {
- "channel_name": "CH145",
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- {
- "channel_name": "CH146",
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- {
- "channel_name": "CH147",
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- {
- "channel_name": "CH148",
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- {
- "channel_name": "CH149",
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- {
- "channel_name": "CH150",
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- {
- "channel_name": "CH151",
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- {
- "channel_name": "CH152",
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- {
- "channel_name": "CH153",
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- {
- "channel_name": "CH154",
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- {
- "channel_name": "CH155",
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- {
- "channel_name": "CH156",
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- {
- "channel_name": "CH157",
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- {
- "channel_name": "CH158",
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- {
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- {
- "channel_name": "CH160",
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- {
- "channel_name": "CH161",
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- {
- "channel_name": "CH162",
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- {
- "channel_name": "CH163",
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- {
- "channel_name": "CH164",
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- {
- "channel_name": "CH165",
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- {
- "channel_name": "CH166",
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- {
- "channel_name": "CH167",
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- {
- "channel_name": "CH168",
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- {
- "channel_name": "CH169",
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- {
- "channel_name": "CH170",
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- {
- "channel_name": "CH171",
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- {
- "channel_name": "CH172",
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- {
- "channel_name": "CH173",
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- {
- "channel_name": "CH174",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH175",
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- {
- "channel_name": "CH176",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH177",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH178",
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- },
- {
- "channel_name": "CH179",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH180",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH181",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH182",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH183",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH184",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH185",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH186",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH187",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH188",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH189",
- "description": "Neuropixels electrode",
- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH190",
- "description": "Neuropixels electrode",
- "identifier": "",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH191",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH192",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH193",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH194",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH195",
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- {
- "channel_name": "CH196",
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- {
- "channel_name": "CH197",
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- {
- "channel_name": "CH198",
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- {
- "channel_name": "CH199",
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- {
- "channel_name": "CH200",
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- {
- "channel_name": "CH201",
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- {
- "channel_name": "CH202",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH203",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH204",
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- },
- {
- "channel_name": "CH205",
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- {
- "channel_name": "CH206",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH207",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH208",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH209",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH210",
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- {
- "channel_name": "CH211",
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- {
- "channel_name": "CH212",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH213",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH214",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH215",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH216",
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- {
- "channel_name": "CH217",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH218",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH219",
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- {
- "channel_name": "CH220",
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- {
- "channel_name": "CH221",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH222",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH223",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH224",
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- {
- "channel_name": "CH225",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH226",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH227",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH228",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH229",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH230",
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- {
- "channel_name": "CH231",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH232",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH233",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH234",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH235",
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- {
- "channel_name": "CH236",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH237",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH238",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH239",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH240",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH241",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH242",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH243",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH244",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH245",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH246",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH247",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH248",
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- "bit_volts": 0.1949999928474426,
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- },
- {
- "channel_name": "CH249",
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- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH250",
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- {
- "channel_name": "CH251",
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- {
- "channel_name": "CH252",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
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- {
- "channel_name": "CH253",
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- {
- "channel_name": "CH254",
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- },
- {
- "channel_name": "CH255",
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- },
- {
- "channel_name": "CH256",
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- "history": "Neuropix-PXI -> Merger -> Record Node",
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- },
- {
- "channel_name": "CH257",
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- {
- "channel_name": "CH258",
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- {
- "channel_name": "CH259",
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- {
- "channel_name": "CH260",
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- {
- "channel_name": "CH261",
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- {
- "channel_name": "CH262",
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- {
- "channel_name": "CH263",
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- {
- "channel_name": "CH264",
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- {
- "channel_name": "CH265",
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- {
- "channel_name": "CH266",
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- {
- "channel_name": "CH267",
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- {
- "channel_name": "CH268",
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- {
- "channel_name": "CH269",
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- {
- "channel_name": "CH270",
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- {
- "channel_name": "CH271",
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- {
- "channel_name": "CH272",
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- {
- "channel_name": "CH273",
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- {
- "channel_name": "CH274",
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- {
- "channel_name": "CH275",
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- {
- "channel_name": "CH276",
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- {
- "channel_name": "CH277",
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- {
- "channel_name": "CH278",
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- {
- "channel_name": "CH279",
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- {
- "channel_name": "CH280",
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- {
- "channel_name": "CH281",
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- {
- "channel_name": "CH282",
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- {
- "channel_name": "CH283",
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- {
- "channel_name": "CH284",
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- {
- "channel_name": "CH285",
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- {
- "channel_name": "CH286",
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- {
- "channel_name": "CH287",
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- {
- "channel_name": "CH288",
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- {
- "channel_name": "CH289",
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- {
- "channel_name": "CH290",
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- {
- "channel_name": "CH291",
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- {
- "channel_name": "CH292",
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- {
- "channel_name": "CH293",
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- {
- "channel_name": "CH294",
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- {
- "channel_name": "CH295",
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- {
- "channel_name": "CH296",
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- {
- "channel_name": "CH297",
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- {
- "channel_name": "CH298",
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- {
- "channel_name": "CH299",
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- {
- "channel_name": "CH300",
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- {
- "channel_name": "CH301",
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- {
- "channel_name": "CH302",
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- {
- "channel_name": "CH303",
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- {
- "channel_name": "CH304",
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- {
- "channel_name": "CH305",
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- {
- "channel_name": "CH306",
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- {
- "channel_name": "CH307",
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- {
- "channel_name": "CH308",
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- {
- "channel_name": "CH309",
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- {
- "channel_name": "CH310",
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- {
- "channel_name": "CH311",
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- {
- "channel_name": "CH312",
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- {
- "channel_name": "CH313",
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- {
- "channel_name": "CH314",
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- {
- "channel_name": "CH315",
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- {
- "channel_name": "CH316",
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- {
- "channel_name": "CH317",
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- {
- "channel_name": "CH318",
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- {
- "channel_name": "CH319",
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- {
- "channel_name": "CH320",
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- {
- "channel_name": "CH321",
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- {
- "channel_name": "CH322",
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- {
- "channel_name": "CH323",
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- {
- "channel_name": "CH324",
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- {
- "channel_name": "CH325",
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- {
- "channel_name": "CH326",
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- {
- "channel_name": "CH327",
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- {
- "channel_name": "CH328",
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- {
- "channel_name": "CH329",
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- {
- "channel_name": "CH330",
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- {
- "channel_name": "CH331",
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- {
- "channel_name": "CH332",
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- {
- "channel_name": "CH333",
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- {
- "channel_name": "CH334",
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- {
- "channel_name": "CH335",
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- {
- "channel_name": "CH336",
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- {
- "channel_name": "CH337",
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- {
- "channel_name": "CH338",
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- {
- "channel_name": "CH339",
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- {
- "channel_name": "CH340",
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- {
- "channel_name": "CH341",
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- {
- "channel_name": "CH342",
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- {
- "channel_name": "CH343",
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- {
- "channel_name": "CH344",
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- {
- "channel_name": "CH345",
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- {
- "channel_name": "CH346",
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- {
- "channel_name": "CH347",
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- {
- "channel_name": "CH348",
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- {
- "channel_name": "CH349",
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- {
- "channel_name": "CH350",
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- {
- "channel_name": "CH351",
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- {
- "channel_name": "CH352",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH353",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH354",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH355",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH356",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH357",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH358",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH359",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH360",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH361",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH362",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH363",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH364",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH365",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH366",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH367",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH368",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH369",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH370",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH371",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH372",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH373",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH374",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH375",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH376",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH377",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH378",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH379",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH380",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH381",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH382",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH383",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- },
- {
- "channel_name": "CH384",
- "description": "Neuropixels electrode",
- "identifier": "",
- "history": "Neuropix-PXI -> Merger -> Record Node",
- "bit_volts": 0.1949999928474426,
- "units": ""
- }
- ]
- },
- {
- "folder_name": "NI-DAQmx-103.PXIe-6341/",
- "sample_rate": 30000.0,
- "source_processor_name": "NI-DAQmx",
- "source_processor_id": 103,
- "stream_name": "PXIe-6341",
- "recorded_processor": "Record Node",
- "recorded_processor_id": 101,
- "num_channels": 8,
- "channels": [
- {
- "channel_name": "AI0",
- "description": "Analog Input channel from a NIDAQ device",
- "identifier": "",
- "history": "NI-DAQmx -> Merger -> Record Node",
- "bit_volts": 0.0003051850944757462,
- "units": ""
- },
- {
- "channel_name": "AI1",
- "description": "Analog Input channel from a NIDAQ device",
- "identifier": "",
- "history": "NI-DAQmx -> Merger -> Record Node",
- "bit_volts": 0.0003051850944757462,
- "units": ""
- },
- {
- "channel_name": "AI2",
- "description": "Analog Input channel from a NIDAQ device",
- "identifier": "",
- "history": "NI-DAQmx -> Merger -> Record Node",
- "bit_volts": 0.0003051850944757462,
- "units": ""
- },
- {
- "channel_name": "AI3",
- "description": "Analog Input channel from a NIDAQ device",
- "identifier": "",
- "history": "NI-DAQmx -> Merger -> Record Node",
- "bit_volts": 0.0003051850944757462,
- "units": ""
- },
- {
- "channel_name": "AI4",
- "description": "Analog Input channel from a NIDAQ device",
- "identifier": "",
- "history": "NI-DAQmx -> Merger -> Record Node",
- "bit_volts": 0.0003051850944757462,
- "units": ""
- },
- {
- "channel_name": "AI5",
- "description": "Analog Input channel from a NIDAQ device",
- "identifier": "",
- "history": "NI-DAQmx -> Merger -> Record Node",
- "bit_volts": 0.0003051850944757462,
- "units": ""
- },
- {
- "channel_name": "AI6",
- "description": "Analog Input channel from a NIDAQ device",
- "identifier": "",
- "history": "NI-DAQmx -> Merger -> Record Node",
- "bit_volts": 0.0003051850944757462,
- "units": ""
- },
- {
- "channel_name": "AI7",
- "description": "Analog Input channel from a NIDAQ device",
- "identifier": "",
- "history": "NI-DAQmx -> Merger -> Record Node",
- "bit_volts": 0.0003051850944757462,
- "units": ""
- }
- ]
- }
- ],
- "events": [
- {
- "folder_name": "Neuropix-PXI-100.ProbeB/TTL/",
- "channel_name": "Neuropixels PXI Sync",
- "description": "Status of SMA sync line on PXI card",
- "identifier": "neuropixels.sync",
- "sample_rate": 30000.0,
- "type": "int16",
- "source_processor": "Neuropix-PXI",
- "stream_name": "ProbeB",
- "initial_state": 0
- },
- {
- "folder_name": "Neuropix-PXI-100.ProbeC/TTL/",
- "channel_name": "Neuropixels PXI Sync",
- "description": "Status of SMA sync line on PXI card",
- "identifier": "neuropixels.sync",
- "sample_rate": 30000.0,
- "type": "int16",
- "source_processor": "Neuropix-PXI",
- "stream_name": "ProbeC",
- "initial_state": 0
- },
- {
- "folder_name": "NI-DAQmx-103.PXIe-6341/TTL/",
- "channel_name": "PXIe-6341Digital Input Line",
- "description": "Digital Line from a NIDAQ device containing 8 inputs",
- "identifier": "identifier",
- "sample_rate": 30000.0,
- "type": "int16",
- "source_processor": "NI-DAQmx",
- "stream_name": "PXIe-6341",
- "initial_state": 0
- },
- {
- "folder_name": "MessageCenter/",
- "channel_name": "Messages",
- "description": "Broadcasts messages from the MessageCenter",
- "identifier": "messagecenter.events",
- "sample_rate": 30000.0,
- "type": "string",
- "source_processor": "Message Center",
- "stream_name": "ProbeB"
- }
- ],
- "spikes": []
- }
\ No newline at end of file
diff --git a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment6/recording1/sync_messages.txt b/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment6/recording1/sync_messages.txt
deleted file mode 100644
index 9e0c6e2..0000000
--- a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/experiment6/recording1/sync_messages.txt
+++ /dev/null
@@ -1,4 +0,0 @@
-Software Time (milliseconds since midnight Jan 1st 1970 UTC): 1651602328909
-Start Time for Neuropix-PXI (100) - ProbeB @ 30000 Hz: 255285
-Start Time for Neuropix-PXI (100) - ProbeC @ 30000 Hz: 255667
-Start Time for NI-DAQmx (103) - PXIe-6341 @ 30000 Hz: 265001
diff --git a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/settings.xml b/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/settings.xml
deleted file mode 100644
index 51d287b..0000000
--- a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/settings.xml
+++ /dev/null
@@ -1,752 +0,0 @@
-
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- 0.6.0
- 8
- 3 May 2022 10:52:24
- Windows 10
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diff --git a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/settings_3.xml b/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/settings_3.xml
deleted file mode 100644
index 2737d7b..0000000
--- a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/settings_3.xml
+++ /dev/null
@@ -1,752 +0,0 @@
-
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-
- 0.6.0
- 8
- 3 May 2022 11:09:55
- Windows 10
-
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diff --git a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/settings_6.xml b/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/settings_6.xml
deleted file mode 100644
index 4ff8157..0000000
--- a/tests/resources/v0.6.x_neuropixels_multiexp_multistream/Record Node 101/settings_6.xml
+++ /dev/null
@@ -1,752 +0,0 @@
-
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- 0.6.0
- 8
- 3 May 2022 11:25:28
- Windows 10
-
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diff --git a/tests/test_ephys_job.py b/tests/test_ephys_job.py
deleted file mode 100644
index 4d14c1a..0000000
--- a/tests/test_ephys_job.py
+++ /dev/null
@@ -1,1224 +0,0 @@
-"""Tests for the ephys package"""
-
-import json
-import os
-import unittest
-from datetime import datetime
-from pathlib import Path
-from unittest.mock import MagicMock, call, patch
-
-from numcodecs import Blosc
-from wavpack_numcodecs import WavPack
-
-from aind_data_transformation.core import JobResponse
-from aind_data_transformation.ephys.ephys_job import (
- EphysCompressionJob,
- EphysJobSettings,
-)
-from aind_data_transformation.ephys.models import CompressorName
-from aind_data_transformation.ephys.npopto_correction import (
- correct_np_opto_electrode_locations,
- get_standard_np_opto_electrode_positions,
-)
-
-TEST_DIR = Path(os.path.dirname(os.path.realpath(__file__))) / "resources"
-DATA_DIR = TEST_DIR / "v0.6.x_neuropixels_multiexp_multistream"
-NP_OPTO_CORRECT_DIR = TEST_DIR / "np_opto_corrections"
-
-
-class TestEphysJob(unittest.TestCase):
- """Tests for ephys_job module"""
-
- @classmethod
- def setUpClass(cls):
- """Setup basic job settings and job that can be used across tests"""
- basic_job_settings = EphysJobSettings(
- input_source=DATA_DIR,
- output_directory=Path("output_dir"),
- compress_job_save_kwargs={"n_jobs": 1},
- )
- cls.basic_job_settings = basic_job_settings
- cls.basic_job = EphysCompressionJob(job_settings=basic_job_settings)
-
- @patch("warnings.warn")
- def test_get_compressor_default(self, _: MagicMock):
- """Tests _get_compressor_default method with default settings."""
- compressor = self.basic_job._get_compressor()
- expected_default = WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- )
- self.assertEqual(expected_default, compressor)
-
- @patch("warnings.warn")
- def test_get_compressor_wavpack(self, _: MagicMock):
- """Tests _get_compressor_default method with WavPack settings."""
- compressor_kwargs = {
- "level": 4,
- }
- settings = EphysJobSettings(
- input_source=Path("input_dir"),
- output_directory=Path("output_dir"),
- compressor_name=CompressorName.WAVPACK,
- compressor_kwargs=compressor_kwargs,
- )
- etl_job = EphysCompressionJob(job_settings=settings)
- compressor = etl_job._get_compressor()
- expected_compressor = WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=4,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- )
- self.assertEqual(expected_compressor, compressor)
-
- def test_get_compressor_blosc(self):
- """Tests _get_compressor_default method with Blosc settings."""
- compressor_kwargs = {
- "clevel": 4,
- }
- settings = EphysJobSettings(
- input_source=Path("input_dir"),
- output_directory=Path("output_dir"),
- compressor_name=CompressorName.BLOSC,
- compressor_kwargs=compressor_kwargs,
- )
- etl_job = EphysCompressionJob(job_settings=settings)
- compressor = etl_job._get_compressor()
- expected_compressor = Blosc(clevel=4)
- self.assertEqual(expected_compressor, compressor)
-
- def test_get_compressor_error(self):
- """Tests _get_compressor_default method with unknown compressor."""
-
- etl_job = EphysCompressionJob(
- job_settings=EphysJobSettings.model_construct(
- compressor_name="UNKNOWN"
- )
- )
- with self.assertRaises(Exception) as e:
- etl_job._get_compressor()
-
- expected_error_message = (
- "Unknown compressor. Please select one of "
- "[, "
- "]",
- )
- self.assertEqual(expected_error_message, e.exception.args)
-
- def test_get_read_blocks(self):
- """Tests _get_read_blocks method"""
- read_blocks = self.basic_job._get_read_blocks()
- # Instead of constructing OpenEphysBinaryRecordingExtractor to
- # compare against, we can just compare the repr of the classes
- read_blocks_repr = []
- for read_block in read_blocks:
- copied_read_block = read_block
- copied_read_block["recording"] = repr(read_block["recording"])
- read_blocks_repr.append(copied_read_block)
- extractor_str_1 = (
- "OpenEphysBinaryRecordingExtractor: 8 channels - 30.0kHz "
- "- 1 segments - 100 samples \n"
- " 0.00s (3.33 ms) - int16 dtype "
- "- 1.56 KiB"
- )
- extractor_str_2 = (
- "OpenEphysBinaryRecordingExtractor: 384 channels - 30.0kHz "
- "- 1 segments - 100 samples \n"
- " 0.00s (3.33 ms) - int16 dtype "
- "- 75.00 KiB"
- )
- expected_read_blocks = [
- {
- "recording": extractor_str_1,
- "experiment_name": "experiment1",
- "stream_name": "Record Node 101#NI-DAQmx-103.PXIe-6341",
- },
- {
- "recording": extractor_str_2,
- "experiment_name": "experiment1",
- "stream_name": "Record Node 101#Neuropix-PXI-100.ProbeB",
- },
- {
- "recording": extractor_str_2,
- "experiment_name": "experiment1",
- "stream_name": "Record Node 101#Neuropix-PXI-100.ProbeC",
- },
- {
- "recording": extractor_str_1,
- "experiment_name": "experiment3",
- "stream_name": "Record Node 101#NI-DAQmx-103.PXIe-6341",
- },
- {
- "recording": extractor_str_2,
- "experiment_name": "experiment3",
- "stream_name": "Record Node 101#Neuropix-PXI-100.ProbeB",
- },
- {
- "recording": extractor_str_2,
- "experiment_name": "experiment3",
- "stream_name": "Record Node 101#Neuropix-PXI-100.ProbeC",
- },
- {
- "recording": extractor_str_1,
- "experiment_name": "experiment6",
- "stream_name": "Record Node 101#NI-DAQmx-103.PXIe-6341",
- },
- {
- "recording": extractor_str_2,
- "experiment_name": "experiment6",
- "stream_name": "Record Node 101#Neuropix-PXI-100.ProbeB",
- },
- {
- "recording": extractor_str_2,
- "experiment_name": "experiment6",
- "stream_name": "Record Node 101#Neuropix-PXI-100.ProbeC",
- },
- ]
- expected_scaled_read_blocks_str = set(
- [json.dumps(o) for o in expected_read_blocks]
- )
- read_blocks_repr_str = set([json.dumps(o) for o in read_blocks_repr])
- self.assertEqual(expected_scaled_read_blocks_str, read_blocks_repr_str)
-
- def test_scale_read_blocks(self):
- """Tests _scale_read_blocks method"""
- read_blocks = self.basic_job._get_read_blocks()
- scaled_read_blocks = self.basic_job._scale_read_blocks(
- read_blocks=read_blocks,
- random_seed=0,
- num_chunks_per_segment=10,
- chunk_size=50,
- )
- # Instead of constructing ScaledRecording classes to
- # compare against, we can just compare the repr of the classes
- scaled_read_blocks_repr = []
- for read_block in scaled_read_blocks:
- copied_read_block = read_block
- copied_read_block["scaled_recording"] = repr(
- read_block["scaled_recording"]
- )
- scaled_read_blocks_repr.append(copied_read_block)
-
- extractor_str_1 = (
- "OpenEphysBinaryRecordingExtractor: 8 channels - 30.0kHz "
- "- 1 segments - 100 samples \n"
- " 0.00s (3.33 ms) - int16 dtype "
- "- 1.56 KiB"
- )
- extractor_str_2 = (
- "ScaleRecording: 384 channels - 30.0kHz - 1 segments "
- "- 100 samples - 0.00s (3.33 ms) - int16 dtype \n"
- " 75.00 KiB"
- )
-
- expected_scaled_read_blocks = [
- {
- "scaled_recording": extractor_str_1,
- "experiment_name": "experiment1",
- "stream_name": "Record Node 101#NI-DAQmx-103.PXIe-6341",
- },
- {
- "scaled_recording": extractor_str_2,
- "experiment_name": "experiment1",
- "stream_name": "Record Node 101#Neuropix-PXI-100.ProbeB",
- },
- {
- "scaled_recording": extractor_str_2,
- "experiment_name": "experiment1",
- "stream_name": "Record Node 101#Neuropix-PXI-100.ProbeC",
- },
- {
- "scaled_recording": extractor_str_1,
- "experiment_name": "experiment3",
- "stream_name": "Record Node 101#NI-DAQmx-103.PXIe-6341",
- },
- {
- "scaled_recording": extractor_str_2,
- "experiment_name": "experiment3",
- "stream_name": "Record Node 101#Neuropix-PXI-100.ProbeB",
- },
- {
- "scaled_recording": extractor_str_2,
- "experiment_name": "experiment3",
- "stream_name": "Record Node 101#Neuropix-PXI-100.ProbeC",
- },
- {
- "scaled_recording": extractor_str_1,
- "experiment_name": "experiment6",
- "stream_name": "Record Node 101#NI-DAQmx-103.PXIe-6341",
- },
- {
- "scaled_recording": extractor_str_2,
- "experiment_name": "experiment6",
- "stream_name": "Record Node 101#Neuropix-PXI-100.ProbeB",
- },
- {
- "scaled_recording": extractor_str_2,
- "experiment_name": "experiment6",
- "stream_name": "Record Node 101#Neuropix-PXI-100.ProbeC",
- },
- ]
- expected_scaled_read_blocks_str = set(
- [json.dumps(o) for o in expected_scaled_read_blocks]
- )
- scaled_read_blocks_repr_str = set(
- [json.dumps(o) for o in scaled_read_blocks_repr]
- )
- self.assertEqual(
- expected_scaled_read_blocks_str, scaled_read_blocks_repr_str
- )
-
- def test_get_streams_to_clip(self):
- """Tests _get_streams_to_clip method"""
- streams_to_clip = self.basic_job._get_streams_to_clip()
- # TODO: If we want finer granularity, we can compare the numpy.memmap
- # directly instead of just checking their shape
- streams_to_clip_just_shape = []
- for stream_to_clip in streams_to_clip:
- stream_to_clip_copy = {
- "relative_path_name": stream_to_clip["relative_path_name"],
- "n_chan": stream_to_clip["n_chan"],
- "data": stream_to_clip["data"].shape,
- }
- streams_to_clip_just_shape.append(stream_to_clip_copy)
-
- def base_path(num: int) -> Path:
- """Utility method to construct expected output base paths"""
- return (
- Path("Record Node 101")
- / f"experiment{num}"
- / "recording1"
- / "continuous"
- )
-
- expected_output = [
- {
- "relative_path_name": str(
- base_path(1) / "Neuropix-PXI-100.ProbeB" / "continuous.dat"
- ),
- "n_chan": 384,
- "data": (100, 384),
- },
- {
- "relative_path_name": str(
- base_path(1) / "Neuropix-PXI-100.ProbeC" / "continuous.dat"
- ),
- "n_chan": 384,
- "data": (100, 384),
- },
- {
- "relative_path_name": str(
- base_path(1) / "NI-DAQmx-103.PXIe-6341" / "continuous.dat"
- ),
- "n_chan": 8,
- "data": (100, 8),
- },
- {
- "relative_path_name": str(
- base_path(6) / "Neuropix-PXI-100.ProbeB" / "continuous.dat"
- ),
- "n_chan": 384,
- "data": (100, 384),
- },
- {
- "relative_path_name": str(
- base_path(6) / "Neuropix-PXI-100.ProbeC" / "continuous.dat"
- ),
- "n_chan": 384,
- "data": (100, 384),
- },
- {
- "relative_path_name": str(
- base_path(6) / "NI-DAQmx-103.PXIe-6341" / "continuous.dat"
- ),
- "n_chan": 8,
- "data": (100, 8),
- },
- {
- "relative_path_name": str(
- base_path(3) / "NI-DAQmx-103.PXIe-6341" / "continuous.dat"
- ),
- "n_chan": 8,
- "data": (100, 8),
- },
- {
- "relative_path_name": str(
- base_path(3) / "Neuropix-PXI-100.ProbeB" / "continuous.dat"
- ),
- "n_chan": 384,
- "data": (100, 384),
- },
- {
- "relative_path_name": str(
- base_path(3) / "Neuropix-PXI-100.ProbeC" / "continuous.dat"
- ),
- "n_chan": 384,
- "data": (100, 384),
- },
- ]
- expected_output_str = set([json.dumps(o) for o in expected_output])
- streams_to_clip_just_shape_str = set(
- [json.dumps(o) for o in streams_to_clip_just_shape]
- )
- self.assertEqual(expected_output_str, streams_to_clip_just_shape_str)
-
- @patch("shutil.copytree")
- @patch("shutil.ignore_patterns")
- @patch("numpy.memmap")
- def test_copy_and_clip_data(
- self,
- mock_memmap: MagicMock,
- mock_ignore_patterns: MagicMock,
- mock_copy_tree: MagicMock,
- ):
- """Tests _copy_and_clip_data method"""
- mock_ignore_patterns.return_value = ["*.dat"]
-
- def base_path(num: int) -> Path:
- """Utility method to construct expected output base paths"""
- return (
- Path("Record Node 101")
- / f"experiment{num}"
- / "recording1"
- / "continuous"
- )
-
- expected_output = [
- {
- "relative_path_name": str(
- base_path(1) / "Neuropix-PXI-100.ProbeB" / "continuous.dat"
- ),
- "n_chan": 384,
- "data": (100, 384),
- },
- {
- "relative_path_name": str(
- base_path(1) / "Neuropix-PXI-100.ProbeC" / "continuous.dat"
- ),
- "n_chan": 384,
- "data": (100, 384),
- },
- {
- "relative_path_name": str(
- base_path(1) / "NI-DAQmx-103.PXIe-6341" / "continuous.dat"
- ),
- "n_chan": 8,
- "data": (100, 8),
- },
- {
- "relative_path_name": str(
- base_path(6) / "Neuropix-PXI-100.ProbeB" / "continuous.dat"
- ),
- "n_chan": 384,
- "data": (100, 384),
- },
- {
- "relative_path_name": str(
- base_path(6) / "Neuropix-PXI-100.ProbeC" / "continuous.dat"
- ),
- "n_chan": 384,
- "data": (100, 384),
- },
- {
- "relative_path_name": str(
- base_path(6) / "NI-DAQmx-103.PXIe-6341" / "continuous.dat"
- ),
- "n_chan": 8,
- "data": (100, 8),
- },
- {
- "relative_path_name": str(
- base_path(3) / "NI-DAQmx-103.PXIe-6341" / "continuous.dat"
- ),
- "n_chan": 8,
- "data": (100, 8),
- },
- {
- "relative_path_name": str(
- base_path(3) / "Neuropix-PXI-100.ProbeB" / "continuous.dat"
- ),
- "n_chan": 384,
- "data": (100, 384),
- },
- {
- "relative_path_name": str(
- base_path(3) / "Neuropix-PXI-100.ProbeC" / "continuous.dat"
- ),
- "n_chan": 384,
- "data": (100, 384),
- },
- ]
- expected_memmap_calls = []
- for foobar in expected_output:
- expected_memmap_calls.append(
- call(
- filename=Path(foobar["relative_path_name"]),
- dtype="int16",
- shape=foobar["data"],
- order="C",
- mode="w+",
- )
- )
- expected_memmap_calls.append(
- call().__setitem__(slice(None, None, None), foobar["data"])
- )
- self.basic_job._copy_and_clip_data(
- dst_dir=Path("."), stream_gen=expected_output
- )
- mock_ignore_patterns.assert_called_once_with("*.dat")
- mock_copy_tree.assert_called_once_with(
- DATA_DIR, Path("."), ignore=["*.dat"]
- )
- mock_memmap.assert_has_calls(expected_memmap_calls)
-
- @patch("warnings.warn")
- @patch(
- "spikeinterface.extractors.neoextractors.openephys"
- ".OpenEphysBinaryRecordingExtractor.save"
- )
- @patch("spikeinterface.preprocessing.normalize_scale.ScaleRecording.save")
- def test_compress_and_write_scaled_blocks(
- self,
- mock_scale_save: MagicMock,
- mock_bin_save: MagicMock,
- _: MagicMock,
- ):
- """Tests _compress_and_write_block method with scaled rec"""
- read_blocks = self.basic_job._get_read_blocks()
- scaled_read_blocks = self.basic_job._scale_read_blocks(
- read_blocks=read_blocks,
- random_seed=0,
- num_chunks_per_segment=10,
- chunk_size=50,
- )
- compressor = self.basic_job._get_compressor()
- max_windows_filename_len = (
- self.basic_job.job_settings.compress_max_windows_filename_len
- )
- output_dir = (
- self.basic_job.job_settings.output_directory / "compressed"
- )
- output_format = (
- self.basic_job.job_settings.compress_write_output_format
- )
- job_kwargs = self.basic_job.job_settings.compress_job_save_kwargs
- self.basic_job._compress_and_write_block(
- read_blocks=scaled_read_blocks,
- compressor=compressor,
- max_windows_filename_len=max_windows_filename_len,
- output_dir=output_dir,
- output_format=output_format,
- job_kwargs=job_kwargs,
- )
- mock_bin_save.assert_has_calls(
- [
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment1_Record Node 101#NI-DAQmx-103"
- ".PXIe-6341.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment3_Record Node 101#NI-DAQmx-103"
- ".PXIe-6341.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment6_Record Node 101#NI-DAQmx-103"
- ".PXIe-6341.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- ]
- )
- mock_scale_save.assert_has_calls(
- [
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment1_Record Node 101#Neuropix-PXI-100"
- ".ProbeB.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment1_Record Node 101#Neuropix-PXI-100"
- ".ProbeC.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment3_Record Node 101#Neuropix-PXI-100"
- ".ProbeB.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment3_Record Node 101#Neuropix-PXI-100"
- ".ProbeC.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment6_Record Node 101#Neuropix-PXI-100"
- ".ProbeB.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment6_Record Node 101#Neuropix-PXI-100"
- ".ProbeC.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- ]
- )
-
- @patch("warnings.warn")
- @patch(
- "spikeinterface.extractors.neoextractors.openephys"
- ".OpenEphysBinaryRecordingExtractor.save"
- )
- def test_compress_and_write_read_blocks(
- self,
- mock_bin_save: MagicMock,
- _: MagicMock,
- ):
- """Tests _compress_and_write_block method with raw rec"""
- read_blocks = self.basic_job._get_read_blocks()
- compressor = self.basic_job._get_compressor()
- max_windows_filename_len = (
- self.basic_job.job_settings.compress_max_windows_filename_len
- )
- output_dir = (
- self.basic_job.job_settings.output_directory / "compressed"
- )
- output_format = (
- self.basic_job.job_settings.compress_write_output_format
- )
- job_kwargs = self.basic_job.job_settings.compress_job_save_kwargs
- self.basic_job._compress_and_write_block(
- read_blocks=read_blocks,
- compressor=compressor,
- max_windows_filename_len=max_windows_filename_len,
- output_dir=output_dir,
- output_format=output_format,
- job_kwargs=job_kwargs,
- )
- mock_bin_save.assert_has_calls(
- [
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment1_Record Node 101#NI-DAQmx-103"
- ".PXIe-6341.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment1_Record Node 101#Neuropix-PXI-100"
- ".ProbeB.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment1_Record Node 101#Neuropix-PXI-100"
- ".ProbeC.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment3_Record Node 101#NI-DAQmx-103"
- ".PXIe-6341.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment3_Record Node 101#Neuropix-PXI-100"
- ".ProbeB.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment3_Record Node 101#Neuropix-PXI-100"
- ".ProbeC.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment6_Record Node 101#NI-DAQmx-103"
- ".PXIe-6341.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment6_Record Node 101#Neuropix-PXI-100"
- ".ProbeB.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- call(
- format="zarr",
- folder=(
- Path("output_dir")
- / "compressed"
- / (
- "experiment6_Record Node 101#Neuropix-PXI-100"
- ".ProbeC.zarr"
- )
- ),
- compressor=WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- compressor_by_dataset={"times": None},
- n_jobs=1,
- ),
- ],
- any_order=True,
- )
-
- @patch("os.cpu_count")
- @patch("warnings.warn")
- @patch(
- "spikeinterface.extractors.neoextractors.openephys"
- ".OpenEphysBinaryRecordingExtractor.save"
- )
- def test_compress_and_write_read_blocks_cpu_count(
- self,
- mock_bin_save: MagicMock,
- _: MagicMock,
- mock_os_cpu_count: MagicMock,
- ):
- """Tests _compress_and_write_block method with n_jobs set to -1"""
- mock_os_cpu_count.return_value = 1
- read_blocks = self.basic_job._get_read_blocks()
- compressor = self.basic_job._get_compressor()
- max_windows_filename_len = (
- self.basic_job.job_settings.compress_max_windows_filename_len
- )
- output_dir = (
- self.basic_job.job_settings.output_directory / "compressed"
- )
- output_format = (
- self.basic_job.job_settings.compress_write_output_format
- )
- self.basic_job._compress_and_write_block(
- read_blocks=read_blocks,
- compressor=compressor,
- max_windows_filename_len=max_windows_filename_len,
- output_dir=output_dir,
- output_format=output_format,
- job_kwargs={"n_jobs": -1},
- )
- self.assertEqual(9, len(mock_bin_save.mock_calls))
-
- @patch("warnings.warn")
- @patch(
- "spikeinterface.extractors.neoextractors.openephys"
- ".OpenEphysBinaryRecordingExtractor.save"
- )
- @patch("platform.system")
- def test_compress_and_write_windows_filename_error(
- self,
- mock_platform: MagicMock,
- mock_bin_save: MagicMock,
- _: MagicMock,
- ):
- """Tests _compress_and_write_block method when filename is too long
- for Windows OS"""
- mock_platform.return_value = "Windows"
- read_blocks = self.basic_job._get_read_blocks()
- compressor = self.basic_job._get_compressor()
- max_windows_filename_len = 100
- output_dir = Path("x" * 100)
- output_format = (
- self.basic_job.job_settings.compress_write_output_format
- )
- job_kwargs = self.basic_job.job_settings.compress_job_save_kwargs
- with self.assertRaises(Exception) as e:
- self.basic_job._compress_and_write_block(
- read_blocks=read_blocks,
- compressor=compressor,
- max_windows_filename_len=max_windows_filename_len,
- output_dir=output_dir,
- output_format=output_format,
- job_kwargs=job_kwargs,
- )
- self.assertEqual(
- (
- "File name for zarr path is too long (156) and might lead "
- "to errors. Use a shorter destination path.",
- ),
- e.exception.args,
- )
- mock_bin_save.assert_not_called()
-
- @patch("warnings.warn")
- @patch(
- "aind_data_transformation.ephys.ephys_job.EphysCompressionJob"
- "._compress_and_write_block"
- )
- @patch(
- "aind_data_transformation.ephys.ephys_job.EphysCompressionJob"
- "._copy_and_clip_data"
- )
- @patch("logging.info")
- def test_compress_raw_data(
- self,
- mock_log_info: MagicMock,
- mock_copy_and_clip_data: MagicMock,
- mock_compress_and_write_block: MagicMock,
- _: MagicMock,
- ):
- """Tests _compress_raw_data method with basic job"""
- self.basic_job._compress_raw_data()
- settings1_path = DATA_DIR / "Record Node 101" / "settings.xml"
- settings3_path = DATA_DIR / "Record Node 101" / "settings_3.xml"
- settings6_path = DATA_DIR / "Record Node 101" / "settings_6.xml"
- mock_log_info.assert_has_calls(
- [
- call(f"No NP-OPTO probes found in {settings1_path}"),
- call(f"No NP-OPTO probes found in {settings3_path}"),
- call(f"No NP-OPTO probes found in {settings6_path}"),
- call("Clipping source data. This may take a minute."),
- call("Finished clipping source data."),
- call("Compressing source data."),
- call("Finished compressing source data."),
- ],
- any_order=True,
- )
- self.assertEqual(1, len(mock_copy_and_clip_data.mock_calls))
- # More granularity can be added in the future. For now, we just compare
- # the length of the stream_gen list
- actual_clip_args_derived = mock_copy_and_clip_data.mock_calls[0].kwargs
- actual_clip_args_derived["stream_gen"] = len(
- list(actual_clip_args_derived["stream_gen"])
- )
- expected_clip_args_derived = {
- "stream_gen": 9,
- "dst_dir": Path("output_dir") / "ecephys_clipped",
- }
- self.assertEqual(expected_clip_args_derived, actual_clip_args_derived)
-
- self.assertEqual(1, len(mock_compress_and_write_block.mock_calls))
- # More granularity can be added in the future. For now, we just compare
- # the length of the read_blocks list
- actual_comp_args_derived = mock_compress_and_write_block.mock_calls[
- 0
- ].kwargs
- actual_comp_args_derived["read_blocks"] = len(
- list(actual_comp_args_derived["read_blocks"])
- )
- expected_comp_args_derived = {
- "read_blocks": 9,
- "compressor": WavPack(
- bps=0,
- dynamic_noise_shaping=True,
- level=3,
- num_decoding_threads=8,
- num_encoding_threads=1,
- shaping_weight=0.0,
- ),
- "max_windows_filename_len": 150,
- "output_dir": Path("output_dir") / "ecephys_compressed",
- "output_format": "zarr",
- "job_kwargs": {"n_jobs": 1},
- }
- self.assertEqual(expected_comp_args_derived, actual_comp_args_derived)
-
- @patch("aind_data_transformation.ephys.ephys_job.datetime")
- @patch(
- "aind_data_transformation.ephys.ephys_job.EphysCompressionJob"
- "._compress_raw_data"
- )
- def test_run_job(
- self, mock_compress_raw_data: MagicMock, mock_datetime: MagicMock
- ):
- """Tests run_job method"""
- mock_start_time = datetime(2020, 10, 10, 1, 30, 0)
- mock_end_time = datetime(2020, 10, 10, 5, 25, 17)
- mock_time_delta = mock_end_time - mock_start_time
- mock_datetime.now.side_effect = [
- datetime(2020, 10, 10, 1, 30, 0),
- datetime(2020, 10, 10, 5, 25, 17),
- ]
- job_response = self.basic_job.run_job()
- expected_job_response = JobResponse(
- status_code=200,
- message=f"Job finished in: {mock_time_delta}",
- data=None,
- )
- self.assertEqual(expected_job_response, job_response)
- mock_compress_raw_data.assert_called_once()
-
-
-class TestNpOptoCorrection(unittest.TestCase):
- """Tests npopto_corrections module"""
-
- @classmethod
- def setUpClass(cls):
- """Read in the standard positions."""
- with open(NP_OPTO_CORRECT_DIR / "standard_positions.json", "r") as f:
- standard_positions = json.load(f)
- cls.standard_positions = standard_positions
-
- def test_get_standard_np_opto_electrode_positions(self):
- """Tests get_standard_np_opto_electrode_positions class"""
- output = get_standard_np_opto_electrode_positions()
- self.assertEqual(self.standard_positions, list(output))
-
- @patch("xml.etree.ElementTree.ElementTree.write")
- @patch("pathlib.Path.rename")
- @patch("logging.info")
- def test_no_pxi_in_xml_file(
- self,
- mock_log_info: MagicMock,
- mock_rename: MagicMock,
- mock_write: MagicMock,
- ):
- """Tests correct_np_opto_electrode_locations method when no
- Neuropix-PXI is found in xml file"""
- correct_np_opto_electrode_locations(
- input_dir=NP_OPTO_CORRECT_DIR / "settings_altered_no_pxi"
- )
- mock_log_info.assert_not_called()
- mock_rename.assert_not_called()
- mock_write.assert_not_called()
-
- @patch("xml.etree.ElementTree.ElementTree.write")
- @patch("pathlib.Path.rename")
- @patch("logging.info")
- def test_corrections_no_np_opto_probes_found(
- self,
- mock_log_info: MagicMock,
- mock_rename: MagicMock,
- mock_write: MagicMock,
- ):
- """Tests correct_np_opto_electrode_locations method when no np_opto
- probes are found"""
- settings_dir = NP_OPTO_CORRECT_DIR / "settings_2023_04"
- correct_np_opto_electrode_locations(input_dir=settings_dir)
- mock_log_info.assert_called_once_with(
- f"No NP-OPTO probes found in {settings_dir / 'settings.xml'}"
- )
- mock_rename.assert_not_called()
- mock_write.assert_not_called()
-
- @patch("xml.etree.ElementTree.ElementTree.write")
- @patch("pathlib.Path.rename")
- @patch("logging.info")
- def test_corrections_v_0_4_1(
- self,
- mock_log_info: MagicMock,
- mock_rename: MagicMock,
- mock_write: MagicMock,
- ):
- """Tests correct_np_opto_electrode_locations method when the
- neuropixel version is 0.4.1"""
- correct_np_opto_electrode_locations(
- input_dir=NP_OPTO_CORRECT_DIR / "settings_2024_01"
- )
- mock_log_info.assert_not_called()
- mock_rename.assert_not_called()
- mock_write.assert_not_called()
-
- @patch("xml.etree.ElementTree.ElementTree.write")
- @patch("pathlib.Path.rename")
- @patch("logging.info")
- def test_needs_corrections(
- self,
- mock_log_info: MagicMock,
- mock_rename: MagicMock,
- mock_write: MagicMock,
- ):
- """Tests correct_np_opto_electrode_locations method when the
- neuropixel version is 0.4.0"""
- settings_dir = NP_OPTO_CORRECT_DIR / "settings_2022_07"
- correct_np_opto_electrode_locations(
- input_dir=NP_OPTO_CORRECT_DIR / "settings_2022_07"
- )
- mock_log_info.assert_has_calls(
- [
- call("Found NP-OPTO!"),
- call(
- f"Renaming wrong NP-OPTO settings file as "
- f'{settings_dir / "settings.xml.wrong"}'
- ),
- call(
- f"Saving correct NP-OPTO settings file as "
- f'{settings_dir / "settings.xml"}'
- ),
- ]
- )
- mock_rename.assert_called_once_with(
- settings_dir / "settings.xml.wrong"
- )
- mock_write.assert_called_once_with(str(settings_dir / "settings.xml"))
-
-
-if __name__ == "__main__":
- unittest.main()