Skip to content

Latest commit

 

History

History
86 lines (66 loc) · 2.95 KB

CHANGELOG.md

File metadata and controls

86 lines (66 loc) · 2.95 KB

Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

[0.1.5] - 2024-10-18

Added

  • PoolTools output now includes formatted ICC columns
    • ICC columns reported as value between 0 and 1 (i.e., are not multiplied by N)
  • Updated prevalence columns names to explicitly state prevalence per units by appending "%" (N=100) or "per N units" (N != 100) in output data frame
  • Updating default parameters for Analysis tab
    • Set parameter for PoolPrev calls to use all.negative.pools = 'zero'
    • Set parameter for HierPoolPrev calls (i.e., any PoolTools analyses using hierarchical/clustered sampling) to use all.negative.pools = 'zero'
    • Set parameter for PoolPrev calls to use robust = TRUE
    • Set parameter for HierPoolPrev calls to use robust = TRUE

Changed

  • PoolTestR version updated to include improvements from ICC and betterpointestimate branches
  • Refactored run_pooltestr() to use output of which_pooltestr()
  • Added Caitlin Cherryh to citations file

[0.1.4] - 2024-07-19

Added

  • Separate reactiveValues() objects to store UI values to prevent values resetting when UI does.
  • dev branch to store all WIP i.e. PoolPoweR power and sample_size functions.

Changed

  • Design inputs do not reset when upstream settings are changed for:
  • Fixed sample size
  • Fixed sampling period
  • Design back-end overhaul; UI and values are decoupled.
  • Renaming cluster/hierarchical sampling in UI.

[0.1.3] - 2024-05-10

Important UI changes to "Analyse" mode and cleaning up back-end reactivity.

Changed

  • Dropdown arrow for html details appears on browser.
  • Download button no longer disappears when hierarchy_valid() changes.
  • "Real-time" formatting of analyse datatable output i.e. does not require re-analysis with button click. Options include rounding and displaying prevalence per value.
  • Moved datatable formatting options from Advanced settings to Display options.
  • Datatable output remains stable when settings change.
  • Remove 'max pools per cluster' option when not used.
  • Rename files to be sort-of-compliant with golem standards.

[0.1.2] - 2024-04-22

Added

  • Populated Help tabs with links to wiki docs.

Changed

  • Upload data label and tooltip.

[0.1.1] - 2024-04-16

Added

  • Roxygen comments to R util files.
  • utils_dt_display.R to handle post-pooltestr processing.
  • Prevalence multiply option (default 1*2000).
  • CITATION file.

Changed

  • Refactored pooltestr-related code.
  • Analyse prevalence rounding now part of utils_dt_display.R.
  • About page loads from a .md.

Removed

  • Redundant analyse datatable UI.

[0.1.0] - 2024-04-08

Added

  • Changelog and versioning.
  • Version is displayed in app title.
  • Dev files.