diff --git a/Applications/BasisProject.cmake b/Applications/BasisProject.cmake index 02341efd4..7d50c0d0a 100644 --- a/Applications/BasisProject.cmake +++ b/Applications/BasisProject.cmake @@ -27,7 +27,7 @@ # have to be specified here such that the top-level IRTK project can analyze the # inter-module dependencies, as well as dependencies on third-party libraries. # -# @sa http://opensource.andreasschuh.com/cmake-basis/standard/modules.html +# @sa https://cmake-basis.github.io/standard/modules.html # # @ingroup BasisSettings ################################################################################ diff --git a/CMakeLists.txt b/CMakeLists.txt index df2a6b501..0cb463706 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -21,7 +21,7 @@ # @file CMakeLists.txt # @brief Root build configuration file. # -# @sa CMake BASIS +# @sa CMake BASIS ############################################################################## # ---------------------------------------------------------------------------- diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index 746a37ef2..11109012e 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -24,14 +24,14 @@ this change is needed, what it does and how to check whether the code works as i If you intend to contribute your applications to the MIRTK distribution, develop your tools either in a fork of the MIRTK Git repository or a your own MIRTK Package with the common file organization for MIRTK Packages and the appropriate CMake_ configuration -files. See some of the already available modules in the ``Packages/`` directory of the +files. See some of the already available modules in the `Packages/` directory of the MIRTK source tree as reference. Examples of MIRTK Packages are the [Deformable](https://github.com/MIRTK/Deformable) and [Volumetric Mapping](https://github.com/MIRTK/VolumetricMapping) modules, each developed in their own respective GitHub repository. Template files for the creation of a new MIRTK Package can be found in the [Templates](Templates/mirtk-module) directory. These template files can be customized using -the [basisproject](http://opensource.andreasschuh.com/cmake-basis/howto/use-and-customize-templates.html#use-a-template) -tool of [CMake BASIS](http://opensource.andreasschuh.com/cmake-basis/), but can also -simply be copied and edited by hand. But do not copy the ```_conf.py``` file from the -```Templates/mirtk-module/v*/``` directory. +the [basisproject](https://cmake-basis.github.io/howto/use-and-customize-templates.html#use-a-template) +tool of [CMake BASIS](https://cmake-basis.github.io), but can also +simply be copied and edited by hand. But do not copy the `_conf.py` file from the +`Templates/mirtk-module/v*/` directory. diff --git a/Modules/Common/BasisProject.cmake b/Modules/Common/BasisProject.cmake index ffe8829e4..b2d770676 100644 --- a/Modules/Common/BasisProject.cmake +++ b/Modules/Common/BasisProject.cmake @@ -27,7 +27,7 @@ # have to be specified here such that the top-level IRTK project can analyze the # inter-module dependencies, as well as dependencies on third-party libraries. # -# @sa http://opensource.andreasschuh.com/cmake-basis/standard/modules.html +# @sa https://cmake-basis.github.io/standard/modules.html # # @ingroup BasisSettings ################################################################################ diff --git a/Modules/IO/BasisProject.cmake b/Modules/IO/BasisProject.cmake index 71001364f..5fe76d67a 100644 --- a/Modules/IO/BasisProject.cmake +++ b/Modules/IO/BasisProject.cmake @@ -27,7 +27,7 @@ # have to be specified here such that the top-level IRTK project can analyze the # inter-module dependencies, as well as dependencies on third-party libraries. # -# @sa http://opensource.andreasschuh.com/cmake-basis/standard/modules.html +# @sa https://cmake-basis.github.io/standard/modules.html # # @ingroup BasisSettings ################################################################################ diff --git a/Modules/Image/BasisProject.cmake b/Modules/Image/BasisProject.cmake index ba87e3a7c..9dfb84c37 100644 --- a/Modules/Image/BasisProject.cmake +++ b/Modules/Image/BasisProject.cmake @@ -27,7 +27,7 @@ # have to be specified here such that the top-level IRTK project can analyze the # inter-module dependencies, as well as dependencies on third-party libraries. # -# @sa http://opensource.andreasschuh.com/cmake-basis/standard/modules.html +# @sa https://cmake-basis.github.io/standard/modules.html # # @ingroup BasisSettings ################################################################################ diff --git a/Modules/Numerics/BasisProject.cmake b/Modules/Numerics/BasisProject.cmake index d7d14da69..547326055 100644 --- a/Modules/Numerics/BasisProject.cmake +++ b/Modules/Numerics/BasisProject.cmake @@ -27,7 +27,7 @@ # have to be specified here such that the top-level IRTK project can analyze the # inter-module dependencies, as well as dependencies on third-party libraries. # -# @sa http://opensource.andreasschuh.com/cmake-basis/standard/modules.html +# @sa https://cmake-basis.github.io/standard/modules.html # # @ingroup BasisSettings ################################################################################ diff --git a/Modules/PointSet/BasisProject.cmake b/Modules/PointSet/BasisProject.cmake index 2c4aff50c..6dfb982ca 100644 --- a/Modules/PointSet/BasisProject.cmake +++ b/Modules/PointSet/BasisProject.cmake @@ -27,7 +27,7 @@ # have to be specified here such that the top-level IRTK project can analyze the # inter-module dependencies, as well as dependencies on third-party libraries. # -# @sa http://opensource.andreasschuh.com/cmake-basis/standard/modules.html +# @sa https://cmake-basis.github.io/standard/modules.html # # @ingroup BasisSettings ################################################################################ diff --git a/Modules/Registration/BasisProject.cmake b/Modules/Registration/BasisProject.cmake index 0414825d2..bde181c67 100644 --- a/Modules/Registration/BasisProject.cmake +++ b/Modules/Registration/BasisProject.cmake @@ -27,7 +27,7 @@ # have to be specified here such that the top-level IRTK project can analyze the # inter-module dependencies, as well as dependencies on third-party libraries. # -# @sa http://opensource.andreasschuh.com/cmake-basis/standard/modules.html +# @sa https://cmake-basis.github.io/standard/modules.html # # @ingroup BasisSettings ################################################################################ diff --git a/Modules/Transformation/BasisProject.cmake b/Modules/Transformation/BasisProject.cmake index ec53752b7..e44349945 100644 --- a/Modules/Transformation/BasisProject.cmake +++ b/Modules/Transformation/BasisProject.cmake @@ -27,7 +27,7 @@ # have to be specified here such that the top-level IRTK project can analyze the # inter-module dependencies, as well as dependencies on third-party libraries. # -# @sa http://opensource.andreasschuh.com/cmake-basis/standard/modules.html +# @sa https://cmake-basis.github.io/standard/modules.html # # @ingroup BasisSettings ################################################################################ diff --git a/Packages/Deformable b/Packages/Deformable index 8091b88c4..adf56a1f7 160000 --- a/Packages/Deformable +++ b/Packages/Deformable @@ -1 +1 @@ -Subproject commit 8091b88c4e354cc29ecca660ac7c35a47b0577f3 +Subproject commit adf56a1f762962a787f3546afcb85861e4210e00 diff --git a/Packages/VolumetricMapping b/Packages/VolumetricMapping index 57002e4fc..850112cf6 160000 --- a/Packages/VolumetricMapping +++ b/Packages/VolumetricMapping @@ -1 +1 @@ -Subproject commit 57002e4fcb5b0278a35578724e3205c0a88dc737 +Subproject commit 850112cf62b56db86ed80ba8da16074ef79cd98a diff --git a/Templates/mirtk-module/1.0/BasisProject.cmake b/Templates/mirtk-module/1.0/BasisProject.cmake index 2b80fdf42..288b46884 100644 --- a/Templates/mirtk-module/1.0/BasisProject.cmake +++ b/Templates/mirtk-module/1.0/BasisProject.cmake @@ -26,7 +26,7 @@ # have to be specified here such that the top-level IRTK project can analyze the # inter-module dependencies, as well as dependencies on third-party libraries. # -# @sa http://opensource.andreasschuh.com/cmake-basis/standard/modules.html +# @sa https://cmake-basis.github.io/standard/modules.html # # @ingroup BasisSettings ################################################################################