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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(AdvancedFitter)
export(AdvancedPvalcomb)
export(AllelicMeta_est)
export(AllelicMeta_est_par)
export(BetaBinomGenotyping)
export(BetaBinomMix_LLDeriv)
export(BetaBinomMix_LLDeriv_transfo)
export(BetaBinom_test_pvalTS)
export(BrolDB)
export(CppCnT_Optim)
export(CppHetH0_Optim)
export(CppHet_Optim)
export(CppHom_Optim)
export(EMfit_betabinom)
export(EMfit_betabinom_popcomb)
export(EMfit_betabinom_robust)
export(EMfit_binom)
export(GOF_uniform)
export(GradPiPi_cppi)
export(GradPiPi_cppi_MP)
export(GradPiTheta_cppi)
export(GradPiTheta_cppi_MP)
export(GradPi_cppi)
export(GradPi_cppi_MP)
export(GradThetaTheta_cppi)
export(GradThetaTheta_cppi_MP)
export(GradTheta_cppi)
export(GradTheta_cppi_MP)
export(HWE_chisquared)
export(LOItest_logreg)
export(LikelyDistsHet)
export(LogGaussianQuad_CPP)
export(LogNewtonCotes_CPP)
export(LogTanhSinhQuad_CPP)
export(LogTrapezoidalInt_CPP)
export(MPhelper_GradThetaTheta)
export(MomentEst_MixedBetaBinom)
export(MyOptTest)
export(TumPurHelpFun_CPP)
export(TumPurHelpFun_CPP_R)
export(TumPur_LogLik_CPP)
export(TumPur_LogLik_CPP2)
export(TumPur_LogLik_CPP2X)
export(TumPur_LogLik_CPP2Y)
export(TumPur_LogLik_CPP2_10)
export(TumPur_LogLik_CPP2_100)
export(TumPur_LogLik_CPP2_1000)
export(TumPur_LogLik_CPP3)
export(TumPur_LogLik_CPP3X)
export(TumPur_LogLik_CPP4)
export(TumPur_LogLik_CPP_DB1)
export(TumPur_LogLik_CPP_DB2)
export(TumPur_LogLik_CPP_DB3)
export(combine_p_gene)
export(dAD_analysis)
export(dBetaBin_cppi)
export(dBetaBin_cppi_MP)
export(dBetaBinom)
export(dBetaBinom_MP)
export(dBetaBinom_cpp_old)
export(final_filter)
export(grad_pi)
export(grad_pi_MP)
export(grad_pi_old)
export(grad_pi_pi)
export(grad_pi_theta)
export(grad_theta)
export(grad_theta_MP)
export(grad_theta_old)
export(grad_theta_theta)
export(impr_LOI_analysis)
export(imprinting_est)
export(logSums_MaxMethod)
export(logSums_MaxMethodSigned_CPP)
export(logSums_MaxMethod_CPP)
export(logSums_MaxMethod_CPP_R)
export(maelstRom_ADChromplot)
export(maelstRom_EMfitplot)
export(maelstRom_imprintplot)
export(median_AB)
export(median_imprinting)
export(multinomial_coeff)
export(pBetaBinom)
export(pmf_betabinomMix)
export(pmf_binomMix)
export(pmf_impr)
export(prior_filter)
export(qBetaBinom)
export(qbeta_C)
export(qbeta_C3)
export(rBetaBinom)
export(standard_alleles)
export(symmetry_gof)
import(data.table, except = copy)
import(ggnewscale)
import(ggplot2)
import(hash)
import(jsonlite)
import(matlib)
import(parallel)
import(patchwork)
import(scales)
import(stats)
import(stringr)
import(zoo)
importFrom(MASS,rlm)
importFrom(Rcpp,evalCpp)
importFrom(Rdpack,reprompt)
importFrom(alabama,auglag)
importFrom(gmp,factorialZ)
importFrom(gtools,inv.logit)
importFrom(gtools,logit)
importFrom(utils,write.table)
useDynLib(maelstRom, .registration=TRUE)