From 49eec439855f17de9b2f4c9d110df101441f1c2f Mon Sep 17 00:00:00 2001 From: Jadon Clugston <34165782+jClugstor@users.noreply.github.com> Date: Thu, 18 Jan 2024 11:17:12 -0500 Subject: [PATCH] Updatest to 1.10, fixes precompilation (#159) --- Manifest.toml | 403 +++++++++++++++++++++++++--------------------- Project.toml | 2 +- src/precompile.jl | 6 +- 3 files changed, 222 insertions(+), 189 deletions(-) diff --git a/Manifest.toml b/Manifest.toml index 27592b6..f8f4d9e 100644 --- a/Manifest.toml +++ b/Manifest.toml @@ -1,13 +1,13 @@ # This file is machine-generated - editing it directly is not advised -julia_version = "1.9.2" +julia_version = "1.10.0" manifest_format = "2.0" -project_hash = "73a2ff9166312c2cb5b6e56ff3165744350fb323" +project_hash = "ba8bd3ece02af4549e81ad232f9af9c85603b32f" [[deps.ADTypes]] -git-tree-sha1 = "332e5d7baeff8497b923b730b994fa480601efc7" +git-tree-sha1 = "41c37aa88889c171f1300ceac1313c06e891d245" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "0.2.5" +version = "0.2.6" [[deps.AMQPClient]] deps = ["Logging", "MbedTLS", "Sockets"] @@ -23,9 +23,9 @@ version = "0.1.3+0" [[deps.AbstractAlgebra]] deps = ["GroupsCore", "InteractiveUtils", "LinearAlgebra", "MacroTools", "Preferences", "Random", "RandomExtensions", "SparseArrays", "Test"] -git-tree-sha1 = "ce0cb2804273e9147a765501c719038247d7ccd9" +git-tree-sha1 = "d7832de8cf7af26abac741f10372080ac6cb73df" uuid = "c3fe647b-3220-5bb0-a1ea-a7954cac585d" -version = "0.33.0" +version = "0.34.7" [[deps.AbstractFFTs]] deps = ["LinearAlgebra"] @@ -56,29 +56,35 @@ uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" version = "0.4.4" [[deps.Accessors]] -deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Test"] -git-tree-sha1 = "a7055b939deae2455aa8a67491e034f735dd08d3" +deps = ["CompositionsBase", "ConstructionBase", "InverseFunctions", "MacroTools"] +git-tree-sha1 = "01a3b46e47004b18e54b9a37d1b333ba70859068" uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" -version = "0.1.33" +version = "0.1.34" [deps.Accessors.extensions] AccessorsAxisKeysExt = "AxisKeys" + AccessorsDatesExt = "Dates" AccessorsIntervalSetsExt = "IntervalSets" + AccessorsLinearAlgebraExt = "LinearAlgebra" AccessorsStaticArraysExt = "StaticArrays" AccessorsStructArraysExt = "StructArrays" + AccessorsTestExt = "Test" [deps.Accessors.weakdeps] AxisKeys = "94b1ba4f-4ee9-5380-92f1-94cde586c3c5" + Dates = "ade2ca70-3891-5945-98fb-dc099432e06a" IntervalSets = "8197267c-284f-5f27-9208-e0e47529a953" + LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" Requires = "ae029012-a4dd-5104-9daa-d747884805df" StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" StructArrays = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" + Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[deps.Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "02f731463748db57cc2ebfbd9fbc9ce8280d3433" +git-tree-sha1 = "cde29ddf7e5726c9fb511f340244ea3481267608" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.7.1" +version = "3.7.2" weakdeps = ["StaticArrays"] [deps.Adapt.extensions] @@ -141,9 +147,9 @@ version = "0.2.0" [[deps.ArrayInterface]] deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "247efbccf92448be332d154d6ca56b9fcdd93c31" +git-tree-sha1 = "bbec08a37f8722786d87bedf84eae19c020c4efa" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.6.1" +version = "7.7.0" [deps.ArrayInterface.extensions] ArrayInterfaceBandedMatricesExt = "BandedMatrices" @@ -163,9 +169,9 @@ version = "7.6.1" [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "af43df5704827c8618afd36eb56fcab20d3041ee" +git-tree-sha1 = "6364e1f449627f9ca6ba9dd2e48527dd4a682a5e" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.4.3" +version = "1.5.1" weakdeps = ["SparseArrays"] [deps.ArrayLayouts.extensions] @@ -182,9 +188,9 @@ version = "0.1.0" [[deps.AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] -git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" +git-tree-sha1 = "01b8ccb13d68535d73d2b0c23e39bd23155fb712" uuid = "13072b0f-2c55-5437-9ae7-d433b7a33950" -version = "1.0.1" +version = "1.1.0" [[deps.AxisArrays]] deps = ["Dates", "IntervalSets", "IterTools", "RangeArrays"] @@ -259,10 +265,14 @@ uuid = "62783981-4cbd-42fc-bca8-16325de8dc4b" version = "0.1.5" [[deps.BlackBoxOptim]] -deps = ["CPUTime", "Compat", "Distributed", "Distributions", "HTTP", "JSON", "LinearAlgebra", "Printf", "Random", "SpatialIndexing", "StatsBase"] -git-tree-sha1 = "136079f37e3514ec691926093924b591a8842f5d" +deps = ["CPUTime", "Compat", "Distributed", "Distributions", "JSON", "LinearAlgebra", "Printf", "Random", "Requires", "SpatialIndexing", "StatsBase"] +git-tree-sha1 = "9c203a2515b5eeab8f2987614d2b1db83ef03542" uuid = "a134a8b2-14d6-55f6-9291-3336d3ab0209" -version = "0.6.2" +version = "0.6.3" +weakdeps = ["HTTP", "Sockets"] + + [deps.BlackBoxOptim.extensions] + BlackBoxOptimRealtimePlotServerExt = ["HTTP", "Sockets"] [[deps.BoundaryValueDiffEq]] deps = ["ArrayInterface", "BandedMatrices", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "NonlinearSolve", "Reexport", "SciMLBase", "Setfield", "SparseArrays", "TruncatedStacktraces", "UnPack"] @@ -294,15 +304,15 @@ version = "1.0.0" [[deps.CSTParser]] deps = ["Tokenize"] -git-tree-sha1 = "3ddd48d200eb8ddf9cb3e0189fc059fd49b97c1f" +git-tree-sha1 = "1dd0361befc505b9c6db4b5ab7eb874837de0569" uuid = "00ebfdb7-1f24-5e51-bd34-a7502290713f" -version = "3.3.6" +version = "3.4.0" [[deps.CSV]] deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "PrecompileTools", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"] -git-tree-sha1 = "44dbf560808d49041989b8a96cae4cffbeb7966a" +git-tree-sha1 = "679e69c611fff422038e9e21e270c4197d49d918" uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -version = "0.10.11" +version = "0.10.12" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -318,15 +328,15 @@ version = "0.5.1" [[deps.ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "SparseInverseSubset", "Statistics", "StructArrays", "SuiteSparse"] -git-tree-sha1 = "006cc7170be3e0fa02ccac6d4164a1eee1fc8c27" +git-tree-sha1 = "0aa0a3dd7b9bacbbadf1932ccbdfa938985c5561" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.58.0" +version = "1.58.1" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra"] -git-tree-sha1 = "e0af648f0692ec1691b5d094b8724ba1346281cf" +git-tree-sha1 = "2118cb2765f8197b08e5958cdd17c165427425ee" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.18.0" +version = "1.19.0" weakdeps = ["SparseArrays"] [deps.ChainRulesCore.extensions] @@ -343,10 +353,10 @@ weakdeps = ["InverseFunctions"] ChangesOfVariablesInverseFunctionsExt = "InverseFunctions" [[deps.Clang_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "TOML", "Zlib_jll", "libLLVM_jll"] -git-tree-sha1 = "124bb00d4ceace456054f17c7cb01e5c8195c609" +deps = ["Artifacts", "JLLWrappers", "Libdl", "TOML", "Zlib_jll", "libLLVM_jll"] +git-tree-sha1 = "de2204d98741f57e7ddb9a6a738db74ba8a608cb" uuid = "0ee61d77-7f21-5576-8119-9fcc46b10100" -version = "14.0.6+4" +version = "15.0.7+10" [[deps.CloseOpenIntervals]] deps = ["Static", "StaticArrayInterface"] @@ -435,7 +445,7 @@ weakdeps = ["Dates", "LinearAlgebra"] [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" -version = "1.0.5+0" +version = "1.0.5+1" [[deps.CompositeTypes]] git-tree-sha1 = "02d2316b7ffceff992f3096ae48c7829a8aa0638" @@ -526,9 +536,9 @@ version = "1.6.1" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "3dbd312d370723b6bb43ba9d02fc36abade4518d" +git-tree-sha1 = "ac67408d9ddf207de5cfa9a97e114352430f01ed" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.18.15" +version = "0.18.16" [[deps.DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" @@ -546,9 +556,9 @@ version = "0.1.2" [[deps.DelayDiffEq]] deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "LinearAlgebra", "Logging", "OrdinaryDiffEq", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SimpleUnPack"] -git-tree-sha1 = "df712c77bb43b37ea966feb72cb2e92d51a3face" +git-tree-sha1 = "e40378efd2af7658d0a0579aa9e15b17137368f4" uuid = "bcd4f6db-9728-5f36-b5f7-82caef46ccdb" -version = "5.43.1" +version = "5.44.0" [[deps.DelimitedFiles]] deps = ["Mmap"] @@ -599,9 +609,9 @@ weakdeps = ["OrdinaryDiffEq", "Sundials"] [[deps.DiffEqNoiseProcess]] deps = ["DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "Requires", "ResettableStacks", "SciMLBase", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "57ed4597a309c5b2a10cab5f9813adcb78f92117" +git-tree-sha1 = "319377c927a4aa1f491228b2ac23f3554a3497c6" uuid = "77a26b50-5914-5dd7-bc55-306e6241c503" -version = "5.19.0" +version = "5.20.0" [deps.DiffEqNoiseProcess.extensions] DiffEqNoiseProcessReverseDiffExt = "ReverseDiff" @@ -644,9 +654,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"] -git-tree-sha1 = "a6c00f894f24460379cb7136633cef54ac9f6f4a" +git-tree-sha1 = "a4532d110ce91bd744b99280193a317310960c46" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.103" +version = "0.25.106" weakdeps = ["ChainRulesCore", "DensityInterface", "Test"] [deps.Distributions.extensions] @@ -725,10 +735,13 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" [[deps.EnzymeCore]] -deps = ["Adapt"] -git-tree-sha1 = "2efe862de93cd87f620ad6ac9c9e3f83f1b2841b" +git-tree-sha1 = "59c44d8fbc651c0395d8a6eda64b05ce316f58b4" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.6.4" +version = "0.6.5" +weakdeps = ["Adapt"] + + [deps.EnzymeCore.extensions] + AdaptExt = "Adapt" [[deps.EpollShim_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -738,9 +751,9 @@ version = "0.0.20230411+0" [[deps.ExceptionUnwrapping]] deps = ["Test"] -git-tree-sha1 = "e90caa41f5a86296e014e148ee061bd6c3edec96" +git-tree-sha1 = "dcb08a0d93ec0b1cdc4af184b26b591e9695423a" uuid = "460bff9d-24e4-43bc-9d9f-a8973cb893f4" -version = "0.1.9" +version = "0.1.10" [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -779,9 +792,9 @@ version = "4.4.4+1" [[deps.FFTW]] deps = ["AbstractFFTs", "FFTW_jll", "LinearAlgebra", "MKL_jll", "Preferences", "Reexport"] -git-tree-sha1 = "b4fbdd20c889804969571cc589900803edda16b7" +git-tree-sha1 = "ec22cbbcd01cba8f41eecd7d44aac1f23ee985e3" uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341" -version = "1.7.1" +version = "1.7.2" [[deps.FFTW_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -808,9 +821,9 @@ version = "2.0.0" [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "299dc33549f68299137e51e6d49a13b5b1da9673" +git-tree-sha1 = "c5c28c245101bd59154f649e19b038d15901b5dc" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.16.1" +version = "1.16.2" [[deps.FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] @@ -823,9 +836,9 @@ uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] deps = ["LinearAlgebra", "Random"] -git-tree-sha1 = "01dba5dbad6b2766e2ddd7b9d64af0e6d68d95cd" +git-tree-sha1 = "5b93957f6dcd33fc343044af3d48c215be2562f1" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.9.1" +version = "1.9.3" weakdeps = ["PDMats", "SparseArrays", "Statistics"] [deps.FillArrays.extensions] @@ -835,9 +848,9 @@ weakdeps = ["PDMats", "SparseArrays", "Statistics"] [[deps.FiniteDiff]] deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays"] -git-tree-sha1 = "c6e4a1fbe73b31a3dea94b1da449503b8830c306" +git-tree-sha1 = "73d1214fec245096717847c62d389a5d2ac86504" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.21.1" +version = "2.22.0" [deps.FiniteDiff.extensions] FiniteDiffBandedMatricesExt = "BandedMatrices" @@ -917,10 +930,10 @@ uuid = "7627cfbf-f290-59f7-b5e8-595c7b62b918" version = "9.4.0+0" [[deps.GLFW_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Pkg", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll"] -git-tree-sha1 = "d972031d28c8c8d9d7b41a536ad7bb0c2579caca" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll"] +git-tree-sha1 = "ff38ba61beff76b8f4acad8ab0c97ef73bb670cb" uuid = "0656b61e-2033-5cc2-a64a-77c0f6c09b89" -version = "3.3.8+0" +version = "3.3.9+0" [[deps.GPUArrays]] deps = ["Adapt", "GPUArraysCore", "LLVM", "LinearAlgebra", "Printf", "Random", "Reexport", "Serialization", "Statistics"] @@ -1005,16 +1018,16 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[deps.Groebner]] -deps = ["AbstractAlgebra", "Combinatorics", "ExprTools", "Logging", "MultivariatePolynomials", "PrecompileTools", "Primes", "Printf", "Random", "SIMD", "TimerOutputs"] -git-tree-sha1 = "909ce267252dde0d10cccad539021c245fcfa20f" +deps = ["AbstractAlgebra", "Combinatorics", "ExprTools", "Logging", "MultivariatePolynomials", "PrecompileTools", "PrettyTables", "Primes", "Printf", "Random", "SIMD", "TimerOutputs"] +git-tree-sha1 = "6b505ef15e55bdc5bb3ddbcfebdff1c9e67081e8" uuid = "0b43b601-686d-58a3-8a1c-6623616c7cd4" -version = "0.5.0" +version = "0.5.1" [[deps.GroupsCore]] deps = ["Markdown", "Random"] -git-tree-sha1 = "e8465a7f17467c0fa123e0782c4e9aba746250bc" +git-tree-sha1 = "6df9cd6ee79fc59feab33f63a1b3c9e95e2461d5" uuid = "d5909c97-4eac-4ecc-a3dc-fdd0858a4120" -version = "0.4.1" +version = "0.4.2" [[deps.HCubature]] deps = ["Combinatorics", "DataStructures", "LinearAlgebra", "QuadGK", "StaticArrays"] @@ -1109,9 +1122,9 @@ version = "3.9.0" [[deps.IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "31d6adb719886d4e32e38197aae466e98881320b" +git-tree-sha1 = "5fdf2fe6724d8caabf43b557b84ce53f3b7e2f6b" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2024.0.0+0" +version = "2024.0.2+0" [[deps.InteractiveUtils]] deps = ["Markdown"] @@ -1119,9 +1132,13 @@ uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240" [[deps.Interpolations]] deps = ["Adapt", "AxisAlgorithms", "ChainRulesCore", "LinearAlgebra", "OffsetArrays", "Random", "Ratios", "Requires", "SharedArrays", "SparseArrays", "StaticArrays", "WoodburyMatrices"] -git-tree-sha1 = "721ec2cf720536ad005cb38f50dbba7b02419a15" +git-tree-sha1 = "88a101217d7cb38a7b481ccd50d21876e1d1b0e0" uuid = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59" -version = "0.14.7" +version = "0.15.1" +weakdeps = ["Unitful"] + + [deps.Interpolations.extensions] + InterpolationsUnitfulExt = "Unitful" [[deps.IntervalSets]] deps = ["Dates", "Random"] @@ -1156,9 +1173,9 @@ uuid = "92d709cd-6900-40b7-9082-c6be49f344b6" version = "0.2.2" [[deps.IterTools]] -git-tree-sha1 = "4ced6667f9974fc5c5943fa5e2ef1ca43ea9e450" +git-tree-sha1 = "42d5f897009e7ff2cf88db414a389e5ed1bdd023" uuid = "c8e1da08-722c-5040-9ed9-7db0dc04731e" -version = "1.8.0" +version = "1.10.0" [[deps.IteratorInterfaceExtensions]] git-tree-sha1 = "a3f24677c21f5bbe9d2a714f95dcd58337fb2856" @@ -1167,9 +1184,9 @@ version = "1.0.0" [[deps.JLD2]] deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "Pkg", "PrecompileTools", "Printf", "Reexport", "Requires", "TranscodingStreams", "UUIDs"] -git-tree-sha1 = "9bbb5130d3b4fa52846546bca4791ecbdfb52730" +git-tree-sha1 = "e65d2bd5754885e97407ff686da66a58b1e20df8" uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819" -version = "0.4.38" +version = "0.4.41" [[deps.JLFzf]] deps = ["Pipe", "REPL", "Random", "fzf_jll"] @@ -1191,9 +1208,15 @@ version = "0.21.4" [[deps.JSON3]] deps = ["Dates", "Mmap", "Parsers", "PrecompileTools", "StructTypes", "UUIDs"] -git-tree-sha1 = "95220473901735a0f4df9d1ca5b171b568b2daa3" +git-tree-sha1 = "eb3edce0ed4fa32f75a0a11217433c31d56bd48b" uuid = "0f8b85d8-7281-11e9-16c2-39a750bddbf1" -version = "1.13.2" +version = "1.14.0" + + [deps.JSON3.extensions] + JSON3ArrowExt = ["ArrowTypes"] + + [deps.JSON3.weakdeps] + ArrowTypes = "31f734f8-188a-4ce0-8406-c8a06bd891cd" [[deps.JSONSchema]] deps = ["Downloads", "JSON", "JSON3", "URIs"] @@ -1202,28 +1225,28 @@ uuid = "7d188eb4-7ad8-530c-ae41-71a32a6d4692" version = "1.3.0" [[deps.JobSchedulers]] -deps = ["Dates", "JLD2", "JSON", "Logging", "OrderedCollections", "Pipelines", "PrettyTables", "Printf", "Reexport", "Term", "Terming", "Test"] -git-tree-sha1 = "050b2902ab10db782e34b46aa925307935f62860" +deps = ["Dates", "JLD2", "JSON", "Logging", "OrderedCollections", "Pipelines", "PrecompileTools", "PrettyTables", "Printf", "Reexport", "Term", "Terming", "Test"] +git-tree-sha1 = "bff0c8071addffb3ce49c6a40d7b011532c0e5e0" uuid = "eeff360b-c02d-44d3-ab26-4013c616a17e" -version = "0.8.2" +version = "0.8.3" [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" +git-tree-sha1 = "60b1194df0a3298f460063de985eae7b01bc011a" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" -version = "2.1.91+0" +version = "3.0.1+0" [[deps.JuliaFormatter]] deps = ["CSTParser", "CommonMark", "DataStructures", "Glob", "Pkg", "PrecompileTools", "Tokenize"] -git-tree-sha1 = "2d2f630931dcf9cc4f753777a9c9ffb48d504116" +git-tree-sha1 = "8f5295e46f594ad2d8652f1098488a77460080cd" uuid = "98e50ef6-434e-11e9-1051-2b60c6c9e899" -version = "1.0.43" +version = "1.0.45" [[deps.JumpProcesses]] deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "UnPack"] -git-tree-sha1 = "e047c47fca2ac1ac687e006a257f96632fb95a7b" +git-tree-sha1 = "c451feb97251965a9fe40bacd62551a72cc5902c" uuid = "ccbc3e58-028d-4f4c-8cd5-9ae44345cda5" -version = "9.9.0" +version = "9.10.1" weakdeps = ["FastBroadcast"] [deps.JumpProcesses.extensions] @@ -1237,9 +1260,9 @@ version = "0.4.1" [[deps.KernelAbstractions]] deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "81de11f7b02465435aab0ed7e935965bfcb3072b" +git-tree-sha1 = "653e0824fc9ab55b3beec67a6dbbe514a65fb954" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.14" +version = "0.9.15" weakdeps = ["EnzymeCore"] [deps.KernelAbstractions.extensions] @@ -1247,15 +1270,15 @@ weakdeps = ["EnzymeCore"] [[deps.KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" +git-tree-sha1 = "fee018a29b60733876eb557804b5b109dd3dd8a7" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.7" +version = "0.6.8" [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "17e462054b42dcdda73e9a9ba0c67754170c88ae" +git-tree-sha1 = "8a6837ec02fe5fb3def1abc907bb802ef11a0729" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.9.4" +version = "0.9.5" [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1271,9 +1294,9 @@ version = "3.0.0+1" [[deps.LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Preferences", "Printf", "Requires", "Unicode"] -git-tree-sha1 = "0678579657515e88b6632a3a482d39adcbb80445" +git-tree-sha1 = "cb4619f7353fc62a1a22ffa3d7ed9791cfb47ad8" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "6.4.1" +version = "6.4.2" [deps.LLVM.extensions] BFloat16sExt = "BFloat16s" @@ -1288,15 +1311,15 @@ uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" version = "0.0.27+1" [[deps.LLVMOpenMP_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "f689897ccbe049adb19a065c495e75f372ecd42b" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "d986ce2d884d49126836ea94ed5bfb0f12679713" uuid = "1d63c593-3942-5779-bab2-d838dc0a180e" -version = "15.0.4+0" +version = "15.0.7+0" [[deps.LRUCache]] -git-tree-sha1 = "d36130483e3b6e4cd88d81633b596563264f15db" +git-tree-sha1 = "5930ef949f30a9a947c69ef6b069c0b1aa27619d" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.5.0" +version = "1.6.0" [[deps.LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1311,9 +1334,9 @@ version = "1.3.1" [[deps.LabelledArrays]] deps = ["ArrayInterface", "ChainRulesCore", "ForwardDiff", "LinearAlgebra", "MacroTools", "PreallocationTools", "RecursiveArrayTools", "StaticArrays"] -git-tree-sha1 = "cd04158424635efd05ff38d5f55843397b7416a9" +git-tree-sha1 = "f12f2225c999886b69273f84713d1b9cb66faace" uuid = "2ee39098-c373-598a-b85f-a56591580800" -version = "1.14.0" +version = "1.15.0" [[deps.LambertW]] git-tree-sha1 = "c5ffc834de5d61d00d2b0e18c96267cffc21f648" @@ -1371,21 +1394,26 @@ version = "1.0.0" [[deps.LibCURL]] deps = ["LibCURL_jll", "MozillaCACerts_jll"] uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21" -version = "0.6.3" +version = "0.6.4" [[deps.LibCURL_jll]] deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"] uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0" -version = "7.84.0+0" +version = "8.4.0+0" [[deps.LibGit2]] -deps = ["Base64", "NetworkOptions", "Printf", "SHA"] +deps = ["Base64", "LibGit2_jll", "NetworkOptions", "Printf", "SHA"] uuid = "76f85450-5226-5b5a-8eaa-529ad045b433" +[[deps.LibGit2_jll]] +deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll"] +uuid = "e37daf67-58a4-590a-8e99-b0245dd2ffc5" +version = "1.6.4+0" + [[deps.LibSSH2_jll]] deps = ["Artifacts", "Libdl", "MbedTLS_jll"] uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8" -version = "1.10.2+0" +version = "1.11.0+1" [[deps.Libdl]] uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb" @@ -1570,16 +1598,16 @@ uuid = "6c6e2e6c-3030-632d-7369-2d6c69616d65" version = "0.1.4" [[deps.MKL_jll]] -deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] -git-tree-sha1 = "eb006abbd7041c28e0d16260e50a24f8f9104913" +deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl"] +git-tree-sha1 = "72dc3cf284559eb8f53aa593fe62cb33f83ed0c0" uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7" -version = "2023.2.0+0" +version = "2024.0.0+0" [[deps.MLJModelInterface]] deps = ["Random", "ScientificTypesBase", "StatisticalTraits"] -git-tree-sha1 = "381d99f0af76d98f50bd5512dcf96a99c13f8223" +git-tree-sha1 = "0cd3514d865b928e6a36f03497f65b5b1dee38c1" uuid = "e80e1ace-859a-464e-9ed9-23947d8ae3ea" -version = "1.9.3" +version = "1.9.4" [[deps.MLStyle]] git-tree-sha1 = "bc38dff0548128765760c79eb7388a4b37fae2c8" @@ -1594,9 +1622,9 @@ version = "5.4.1+0" [[deps.MacroTools]] deps = ["Markdown", "Random"] -git-tree-sha1 = "9ee1618cbf5240e6d4e0371d6f24065083f60c48" +git-tree-sha1 = "b211c553c199c111d998ecdaf7623d1b89b69f93" uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" -version = "0.5.11" +version = "0.5.12" [[deps.ManualMemory]] git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd" @@ -1620,9 +1648,9 @@ version = "0.1.15" [[deps.MathOptInterface]] deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"] -git-tree-sha1 = "362ae34a5291a79e16b8eb87b5738532c5e799ff" +git-tree-sha1 = "372dfbc815ddd820ae9a83990e4f625d95c9bca9" uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" -version = "1.23.0" +version = "1.25.0" [[deps.MathProgBase]] deps = ["LinearAlgebra", "SparseArrays"] @@ -1639,7 +1667,7 @@ version = "1.1.9" [[deps.MbedTLS_jll]] deps = ["Artifacts", "Libdl"] uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1" -version = "2.28.2+0" +version = "2.28.2+1" [[deps.Measures]] git-tree-sha1 = "c13304c81eec1ed3af7fc20e75fb6b26092a1102" @@ -1687,7 +1715,7 @@ version = "0.0.3" [[deps.MozillaCACerts_jll]] uuid = "14a3606d-f60d-562e-9121-12d972cd8159" -version = "2022.10.11" +version = "2023.1.10" [[deps.MuladdMacro]] git-tree-sha1 = "cac9cc5499c25554cba55cd3c30543cff5ca4fab" @@ -1696,9 +1724,9 @@ version = "0.2.4" [[deps.MultivariatePolynomials]] deps = ["ChainRulesCore", "DataStructures", "LinearAlgebra", "MutableArithmetics"] -git-tree-sha1 = "6ffb234d6d7c866a75c1879d2099049d3a35a83a" +git-tree-sha1 = "769c9175942d91ed9b83fa929eee4fe6a1d128ad" uuid = "102ac46a-7ee4-5c85-9060-abc95bfdeaa3" -version = "0.5.3" +version = "0.5.4" [[deps.MutableArithmetics]] deps = ["LinearAlgebra", "SparseArrays", "Test"] @@ -1743,9 +1771,9 @@ version = "4.5.1" [[deps.NNlib]] deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "ac86d2944bf7a670ac8bf0f7ec099b5898abcc09" +git-tree-sha1 = "900a11b3a2b02e36b25cb55a80777d4a4670f0f6" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.9.8" +version = "0.9.10" [deps.NNlib.extensions] NNlibAMDGPUExt = "AMDGPU" @@ -1787,10 +1815,13 @@ uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" version = "1.10.1" [[deps.OffsetArrays]] -deps = ["Adapt"] -git-tree-sha1 = "2ac17d29c523ce1cd38e27785a7d23024853a4bb" +git-tree-sha1 = "6a731f2b5c03157418a20c12195eb4b74c8f8621" uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" -version = "1.12.10" +version = "1.13.0" +weakdeps = ["Adapt"] + + [deps.OffsetArrays.extensions] + OffsetArraysAdaptExt = "Adapt" [[deps.Ogg_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1800,25 +1831,25 @@ version = "1.3.5+1" [[deps.OpenAPI]] deps = ["Base64", "Dates", "Downloads", "HTTP", "JSON", "LibCURL", "MIMEs", "MbedTLS", "TimeZones", "URIs"] -git-tree-sha1 = "aba683de81e96beedc1804a03c531d0a00e03d79" +git-tree-sha1 = "5e48ceeca7de91dc5ae0d3fe2c5d1c6defca474b" uuid = "d5e62ea6-ddf3-4d43-8e4c-ad5e6c8bfd7d" -version = "0.1.20" +version = "0.1.21" [[deps.OpenBLAS32_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "2fb9ee2dc14d555a6df2a714b86b7125178344c2" +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl"] +git-tree-sha1 = "6065c4cff8fee6c6770b277af45d5082baacdba1" uuid = "656ef2d0-ae68-5445-9ca0-591084a874a2" -version = "0.3.21+0" +version = "0.3.24+0" [[deps.OpenBLAS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" -version = "0.3.21+4" +version = "0.3.23+2" [[deps.OpenLibm_jll]] deps = ["Artifacts", "Libdl"] uuid = "05823500-19ac-5b8b-9628-191a04bc5112" -version = "0.8.1+0" +version = "0.8.1+2" [[deps.OpenSSL]] deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] @@ -1913,27 +1944,27 @@ uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" version = "6.58.2" [[deps.Oxygen]] -deps = ["Dates", "HTTP", "JSON3", "MIMEs", "RelocatableFolders", "Sockets"] -git-tree-sha1 = "a0a3c8f10a4f54e3c6ccdb41f30e9a7787c18f4e" +deps = ["Dates", "HTTP", "JSON3", "MIMEs", "RelocatableFolders", "Requires", "Sockets"] +git-tree-sha1 = "5102ac01a7ec8645feba0ba6e7afd187fb2580a6" uuid = "df9a0d86-3283-4920-82dc-4555fc0d1d8b" -version = "1.2.0" +version = "1.3.0" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] uuid = "efcefdf7-47ab-520b-bdef-62a2eaa19f15" -version = "10.42.0+0" +version = "10.42.0+1" [[deps.PDMats]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "4e5be6bb265d33669f98eb55d2a57addd1eeb72c" +git-tree-sha1 = "949347156c25054de2db3b166c52ac4728cbad65" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" -version = "0.11.30" +version = "0.11.31" [[deps.PackageCompiler]] deps = ["Artifacts", "Glob", "LazyArtifacts", "Libdl", "Pkg", "Printf", "RelocatableFolders", "TOML", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "f9392ab72832f4315220a853747ff3dba758c9d1" +git-tree-sha1 = "8b880733c61c4a99a069302390de2d057ee166ce" uuid = "9b87118b-4619-50d2-8e1e-99f35a4d4d9d" -version = "2.1.15" +version = "2.1.16" [[deps.PackageExtensionCompat]] git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518" @@ -1949,9 +1980,9 @@ version = "0.12.3" [[deps.Parsers]] deps = ["Dates", "PrecompileTools", "UUIDs"] -git-tree-sha1 = "a935806434c9d4c506ba941871b327b96d41f2bf" +git-tree-sha1 = "8489905bcdbcfac64d1daa51ca07c0d8f0283821" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.8.0" +version = "2.8.1" [[deps.Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -1960,9 +1991,9 @@ version = "1.3.0" [[deps.Pipelines]] deps = ["Dates", "FilePathsBase", "Logging", "OrderedCollections", "Printf", "Reexport", "Test", "UUIDs"] -git-tree-sha1 = "b870d8e0354361e38b0d9fc1997e96c299e948ae" +git-tree-sha1 = "45e0a70f4974fb1b7f1d2714bc68bffb8fdfe598" uuid = "ef544631-5c6f-4e9b-994c-12e7a4cd724c" -version = "0.10.4" +version = "0.10.5" [[deps.Pixman_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "Libdl"] @@ -1973,7 +2004,7 @@ version = "0.42.2+0" [[deps.Pkg]] deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"] uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" -version = "1.9.2" +version = "1.10.0" [[deps.PlotThemes]] deps = ["PlotUtils", "Statistics"] @@ -1983,9 +2014,9 @@ version = "3.1.0" [[deps.PlotUtils]] deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] -git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" +git-tree-sha1 = "862942baf5663da528f66d24996eb6da85218e76" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.5" +version = "1.4.0" [[deps.Plots]] deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] @@ -2038,10 +2069,10 @@ uuid = "85a6dd25-e78a-55b7-8502-1745935b8125" version = "0.2.4" [[deps.PreallocationTools]] -deps = ["Adapt", "ArrayInterface", "ForwardDiff", "Requires"] -git-tree-sha1 = "f739b1b3cc7b9949af3b35089931f2b58c289163" +deps = ["Adapt", "ArrayInterface", "ForwardDiff"] +git-tree-sha1 = "64bb68f76f789f5fe5930a80af310f19cdafeaed" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.4.12" +version = "0.4.17" [deps.PreallocationTools.extensions] PreallocationToolsReverseDiffExt = "ReverseDiff" @@ -2120,14 +2151,14 @@ deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"] uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb" [[deps.Random]] -deps = ["SHA", "Serialization"] +deps = ["SHA"] uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" [[deps.Random123]] deps = ["Random", "RandomNumbers"] -git-tree-sha1 = "552f30e847641591ba3f39fd1bed559b9deb0ef3" +git-tree-sha1 = "c860e84651f58ce240dd79e5d9e055d55234c35a" uuid = "74087812-796a-5b5d-8853-05524746bad3" -version = "1.6.1" +version = "1.6.2" [[deps.RandomExtensions]] deps = ["Random", "SparseArrays"] @@ -2240,10 +2271,10 @@ uuid = "f50d1b31-88e8-58de-be2c-1cc44531875f" version = "0.4.0+0" [[deps.Roots]] -deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "0f1d92463a020321983d04c110f476c274bafe2e" +deps = ["Accessors", "ChainRulesCore", "CommonSolve", "Printf"] +git-tree-sha1 = "af540898b1e6ca7aa6ba7213c05052809c6c522a" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.22" +version = "2.1.0" [deps.Roots.extensions] RootsForwardDiffExt = "ForwardDiff" @@ -2385,19 +2416,20 @@ uuid = "6462fe0b-24de-5631-8697-dd941f90decc" [[deps.SortingAlgorithms]] deps = ["DataStructures"] -git-tree-sha1 = "5165dfb9fd131cf0c6957a3a7605dede376e7b63" +git-tree-sha1 = "66e0a8e672a0bdfca2c3f5937efb8538b9ddc085" uuid = "a2af1166-a08f-5f64-846c-94a0d3cef48c" -version = "1.2.0" +version = "1.2.1" [[deps.SparseArrays]] deps = ["Libdl", "LinearAlgebra", "Random", "Serialization", "SuiteSparse_jll"] uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" +version = "1.10.0" [[deps.SparseDiffTools]] deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "PackageExtensionCompat", "Random", "Reexport", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "Tricks", "UnPack", "VertexSafeGraphs"] -git-tree-sha1 = "07272c80c278947baca092df0a01da4a10622ad5" +git-tree-sha1 = "c281e11db4eacb36a292a054bac83c5a0aca2a26" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "2.13.0" +version = "2.15.0" [deps.SparseDiffTools.extensions] SparseDiffToolsEnzymeExt = "Enzyme" @@ -2411,9 +2443,9 @@ version = "2.13.0" [[deps.SparseInverseSubset]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "91402087fd5d13b2d97e3ef29bbdf9d7859e678a" +git-tree-sha1 = "52962839426b75b3021296f7df242e40ecfc0852" uuid = "dc90abb0-5640-4711-901d-7e5b23a2fada" -version = "0.1.1" +version = "0.1.2" [[deps.Sparspak]] deps = ["Libdl", "LinearAlgebra", "Logging", "OffsetArrays", "Printf", "SparseArrays", "Test"] @@ -2450,9 +2482,9 @@ version = "0.8.8" [[deps.StaticArrayInterface]] deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "PrecompileTools", "Requires", "SparseArrays", "Static", "SuiteSparse"] -git-tree-sha1 = "03fec6800a986d191f64f5c0996b59ed526eda25" +git-tree-sha1 = "5d66818a39bb04bf328e92bc933ec5b4ee88e436" uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" -version = "1.4.1" +version = "1.5.0" weakdeps = ["OffsetArrays", "StaticArrays"] [deps.StaticArrayInterface.extensions] @@ -2461,12 +2493,13 @@ weakdeps = ["OffsetArrays", "StaticArrays"] [[deps.StaticArrays]] deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] -git-tree-sha1 = "5ef59aea6f18c25168842bded46b16662141ab87" +git-tree-sha1 = "4e17a790909b17f7bf1496e3aec138cf01b60b3b" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.7.0" -weakdeps = ["Statistics"] +version = "1.9.0" +weakdeps = ["ChainRulesCore", "Statistics"] [deps.StaticArrays.extensions] + StaticArraysChainRulesCoreExt = "ChainRulesCore" StaticArraysStatisticsExt = "Statistics" [[deps.StaticArraysCore]] @@ -2483,7 +2516,7 @@ version = "3.2.0" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" -version = "1.9.0" +version = "1.10.0" [[deps.StatsAPI]] deps = ["LinearAlgebra"] @@ -2555,9 +2588,9 @@ deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" [[deps.SuiteSparse_jll]] -deps = ["Artifacts", "Libdl", "Pkg", "libblastrampoline_jll"] +deps = ["Artifacts", "Libdl", "libblastrampoline_jll"] uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" -version = "5.10.1+6" +version = "7.2.1+1" [[deps.Sundials]] deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "PrecompileTools", "Reexport", "SciMLBase", "SparseArrays", "Sundials_jll"] @@ -2566,10 +2599,10 @@ uuid = "c3572dad-4567-51f8-b174-8c6c989267f4" version = "4.20.1" [[deps.Sundials_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "OpenBLAS_jll", "Pkg", "SuiteSparse_jll"] -git-tree-sha1 = "04777432d74ec5bc91ca047c9e0e0fd7f81acdb6" +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "SuiteSparse_jll", "libblastrampoline_jll"] +git-tree-sha1 = "ba4d38faeb62de7ef47155ed321dce40a549c305" uuid = "fb77eaff-e24c-56d4-86b1-d163f2edb164" -version = "5.2.1+0" +version = "5.2.2+0" [[deps.SwaggerMarkdown]] deps = ["JSON", "JSONSchema", "Test", "UUIDs", "YAML"] @@ -2698,9 +2731,9 @@ uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" version = "0.5.23" [[deps.Tokenize]] -git-tree-sha1 = "0454d9a9bad2400c7ccad19ca832a2ef5a8bc3a1" +git-tree-sha1 = "5b5a892ba7704c0977013bd0f9c30f5d962181e0" uuid = "0796e94c-ce3b-5d07-9a54-7f471281c624" -version = "0.5.26" +version = "0.5.28" [[deps.Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] @@ -2811,9 +2844,9 @@ version = "1.6.3" [[deps.Unityper]] deps = ["ConstructionBase"] -git-tree-sha1 = "21c8fc7cd598ef49f11bc9e94871f5d7740e34b9" +git-tree-sha1 = "25008b734a03736c41e2a7dc314ecb95bd6bbdb0" uuid = "a7c27f48-0311-42f6-a7f8-2c11e75eb415" -version = "0.1.5" +version = "0.1.6" [[deps.UnsafeAtomics]] git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" @@ -2857,9 +2890,9 @@ version = "1.21.0+1" [[deps.Wayland_protocols_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "4528479aa01ee1b3b4cd0e6faef0e04cf16466da" +git-tree-sha1 = "93f43ab61b16ddfb2fd3bb13b3ce241cafb0e6c9" uuid = "2381bf8a-dfd0-557d-9999-79630e7b1b91" -version = "1.25.0+0" +version = "1.31.0+0" [[deps.WeakRefStrings]] deps = ["DataAPI", "InlineStrings", "Parsers"] @@ -2869,9 +2902,9 @@ version = "1.4.2" [[deps.WoodburyMatrices]] deps = ["LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "5f24e158cf4cee437052371455fe361f526da062" +git-tree-sha1 = "c1a7aa6219628fcd757dede0ca95e245c5cd9511" uuid = "efce3f68-66dc-5838-9240-27a6d6f5f9b6" -version = "0.5.6" +version = "1.0.0" [[deps.WorkerUtilities]] git-tree-sha1 = "cd1659ba0d57b71a464a29e64dbc67cfe83d54e7" @@ -2880,9 +2913,9 @@ version = "1.6.1" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "da69178aacc095066bad1f69d2f59a60a1dd8ad1" +git-tree-sha1 = "801cbe47eae69adc50f36c3caec4758d2650741b" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.12.0+0" +version = "2.12.2+0" [[deps.XSLT_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"] @@ -3049,7 +3082,7 @@ version = "0.4.9" [[deps.Zlib_jll]] deps = ["Libdl"] uuid = "83775a58-1f1d-513f-b197-d71354ab007a" -version = "1.2.13+0" +version = "1.2.13+1" [[deps.Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -3059,9 +3092,9 @@ version = "1.5.5+0" [[deps.Zygote]] deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "PrecompileTools", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] -git-tree-sha1 = "5ded212acd815612df112bb895ef3910c5a03f57" +git-tree-sha1 = "30c1b8bfc2b3c7c5d8bba7cd32e8b6d5f968e7c3" uuid = "e88e6eb3-aa80-5325-afca-941959d7151f" -version = "0.6.67" +version = "0.6.68" weakdeps = ["Colors", "Distances", "Tracker"] [deps.Zygote.extensions] @@ -3096,7 +3129,7 @@ version = "3.1.1+0" [[deps.libLLVM_jll]] deps = ["Artifacts", "Libdl"] uuid = "8f36deef-c2a5-5394-99ed-8e07531fb29a" -version = "14.0.6+3" +version = "15.0.7+10" [[deps.libaom_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -3113,7 +3146,7 @@ version = "0.15.1+0" [[deps.libblastrampoline_jll]] deps = ["Artifacts", "Libdl"] uuid = "8e850b90-86db-534c-a0d3-1478176c7d93" -version = "5.8.0+0" +version = "5.8.0+1" [[deps.libevdev_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -3134,10 +3167,10 @@ uuid = "36db933b-70db-51c0-b978-0f229ee0e533" version = "1.18.0+0" [[deps.libpng_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] -git-tree-sha1 = "94d180a6d2b5e55e447e2d27a29ed04fe79eb30c" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"] +git-tree-sha1 = "93284c28274d9e75218a416c65ec49d0e0fcdf3d" uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" -version = "1.6.38+0" +version = "1.6.40+0" [[deps.libvorbis_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"] @@ -3154,12 +3187,12 @@ version = "1.1.6+0" [[deps.nghttp2_jll]] deps = ["Artifacts", "Libdl"] uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d" -version = "1.48.0+0" +version = "1.52.0+1" [[deps.p7zip_jll]] deps = ["Artifacts", "Libdl"] uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0" -version = "17.4.0+0" +version = "17.4.0+2" [[deps.x264_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] diff --git a/Project.toml b/Project.toml index b17612b..12d4eae 100644 --- a/Project.toml +++ b/Project.toml @@ -42,7 +42,7 @@ DataFrames = "1.6" DifferentialEquations = "7.8" HTTP = "1.9" JSON3 = "1.13" -JobSchedulers = "0.8" +JobSchedulers = "0.8.3" MathML = "0.1" ModelingToolkit = "8.62" OpenAPI = "0.1" diff --git a/src/precompile.jl b/src/precompile.jl index 6d75f22..75bd73b 100644 --- a/src/precompile.jl +++ b/src/precompile.jl @@ -1,3 +1,3 @@ -@compile_workload begin - SimulationService.amr_get(JSON3.read(HTTP.get("https://raw.githubusercontent.com/DARPA-ASKEM/simulation-integration/main/data/models/sidarthe.json").body).configuration, ODESystem) -end +#@compile_workload begin +# SimulationService.amr_get(JSON3.read(HTTP.get("https://raw.githubusercontent.com/DARPA-ASKEM/simulation-integration/main/data/models/sidarthe.json").body).configuration, ODESystem) +#end