- Removed support for Python 3.9
- Removed support for Python 3.8
- Added support for Python 3.12 and 3.13
- Fix DICOM-WSI conversion issue where not all levels were converted correctly
- Update variable name
file_errors
(waserrors
) in README.md
- Fix timepoints determination
- Increased maximum number of segments to 64
- Required segmentations to be of type Int8 or UInt8
- Reduced memory usage
- Add support for conversion of DICOM-WSI files to TIFF
- Add support for setting segments for some TIFF files
- Removes
PanImgFolder
and outputs ofnew_folders
, insteaddirectory
is added toPanImgFile
- Removed support for Python 3.7
- Added support for Python 3.11
- Return a
frozenset
for segments
- Add
segments
property to thePanImg
model containing the unique values in the image as a tuple ofint
s. These are only calculated forint
oruint
typeSimpleITKImage
s, for any other output typesegments
are set toNone
.
- Fix installation on Windows
- Fix DICOM imports with missing instance number
post_process
is now a public method
- Added support for Python 3.10
- Group DICOM studies by series instance UID or stack ID
- Exclude SimpleITK 2.1.1.1
- Refactored DICOM loading handling some extra corner cases
- Fix loading of 2D DICOM
- Added support for enhanced DICOM files
- Added header validation for nrrd and nifti files
- Fix determination of slice spacing with oblique volumes
- Fix duplicate except clause
- Fix default values for extra metadata fields
- Added extra metadata fields to PanImg object
- Allow array-like window level values in MHA files
- Simplified 4D ITK loading
- Added support for nrrd files
- Added support for vips 8.10
- Removed dependency on
gdcm
panimg
now requirespydicom>=2.2
- Added
recurse_subdirectories
option toconvert
- Added support for e2e files
- Added support for fds and fda images
- Added a CLI
- Fix imports in subdirectories
- Allows importing without pyvips and openslide
- Checks for these libraries are now only done where needed at runtime
- Builders now return generators
- Added post processors
- Initial version