convertTimeSeriesToHDF.ipynb

{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {},
   "outputs": [
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/CircuitCatcher/tifffile.py:265: UserWarning: failed to import the optional _tifffile C extension module.\n",
      "Loading of some compressed images will be very slow.\n",
      "Tifffile.c can be obtained at http://www.lfd.uci.edu/~gohlke/\n",
      "  \"failed to import the optional _tifffile C extension module.\\n\"\n"
     ]
    }
   ],
   "source": [
    "#find folders containing stack time series data and convert to HDF5\n",
    "import pandas as pd\n",
    "import pathlibDB as pldb\n",
    "from pathlib import Path\n",
    "import ccModules as cc\n",
    "import pathlib"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "Targetfolder : /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06\n"
     ]
    }
   ],
   "source": [
    "targetfolder = str(Path.cwd().parent)\n",
    "#targetfolder = pathlib.Path.cwd().parents[0]\n",
    "\n",
    "MIP_str = 'MIP.hdf5'\n",
    "Time_str = 'TimeSeries.hdf5'\n",
    "print('Targetfolder :', targetfolder)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "metadata": {},
   "outputs": [],
   "source": [
    "files = pldb.getDirContents(targetfolder)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 4,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "['flyc_20190717-B06-1_stimDur300at15_00001'\n",
      " 'flyd_20190717-B06-3_stim30s06V_00001'\n",
      " 'flyd_20190717-B06-3_stimDur300at15_00001'\n",
      " 'flyf_20190717-B06-3_stimDur300at15_00001'\n",
      " 'flyc_20190717-B06-1_stim30s06V_00001'\n",
      " 'flye_20190717-B06-3_stimDur300at15_00001'\n",
      " 'flya_20190717-B06-1_stim30s06V_00001'\n",
      " 'flye_20190717-B06-3_stim30s06V_00001'\n",
      " 'flya_20190717-B06-1_stimDur300at15_00001'\n",
      " 'flyb_20190717-B06-1_stim30s06V_00001'\n",
      " 'flyf_20190717-B06-3_stim30s06V_00001'\n",
      " 'flyb_20190717-B06-1_stimDur300at15_00001'\n",
      " 'flyh_20190713-B06-1_stimDur300at15_00001'\n",
      " 'flyg_20190713-B06-3_stimDur300at15_00001'\n",
      " 'flye_20190713-B06-1_stim30s06V_00001'\n",
      " 'flyb_20190713-B06-2_stim30s06V_00001'\n",
      " 'flyc_20190713-B06-3_stimDur300at15_00001'\n",
      " 'flye_20190713-B06-1_stimDur300at15_00001'\n",
      " 'flyd_20190713-B06-4_stim30s06V_00001'\n",
      " 'flya_20190713-B06-1_stim30s06V_00001'\n",
      " 'flyh_20190713-B06-1_stim30s06V_00001'\n",
      " 'flyf_20190713-B06-3_stimDur300at15_00001'\n",
      " 'flyb_20190713-B06-2_stimDur300at15_00001'\n",
      " 'flyg_20190713-B06-3_stim30s06V_00001'\n",
      " 'flyc_20190713-B06-3_stim30s06V_00001'\n",
      " 'flyf_20190713-B06-3_stim30s06V_00001'\n",
      " 'flya_20190713-B06-1_stimDur300at15_00001']\n"
     ]
    }
   ],
   "source": [
    "files = files[files['Directory'] == True]\n",
    "files = files[(files['File_Name'].str.contains('stim30s06V')) | (files['File_Name'].str.contains('stimDur300at15'))]\n",
    "print(files['File_Name'].values)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "metadata": {},
   "outputs": [],
   "source": [
    "#get and count the number of tif files in each folder\n",
    "tif_files = []\n",
    "tif_count = []\n",
    "Time_count =[]\n",
    "MIP_count =[]\n",
    "for row, dseries in files.iterrows():\n",
    "    tif = [str(i.parts[-1]) for i in Path(dseries['Full_Path']).glob('*.tif')]\n",
    "    tif_files.append(tif)\n",
    "    tif_count.append(len(tif))\n",
    "    Time = [str(i.parts[-1]) for i in Path(dseries['Full_Path']).glob('*'+Time_str)]\n",
    "    MIP = [str(i.parts[-1]) for i in Path(dseries['Full_Path']).glob('*'+MIP_str)]\n",
    "    Time_count.append(len(Time))\n",
    "    MIP_count.append(len(MIP))\n",
    "files['tif_count'] = tif_count\n",
    "files['tif_files'] = tif_files\n",
    "files['TimeSeries_count'] = Time_count\n",
    "files['MIP_count'] = MIP_count\n",
    "files = files[files['tif_count'] == 300]\n",
    "#remove folders that already have both MIP and Timeseries data\n",
    "files = files[(files['MIP_count'] == 0) | (files['TimeSeries_count'] == 0)]\n",
    "files= files[~files['File_Name'].str.contains('1040nm')]\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "metadata": {},
   "outputs": [
    {
     "data": {
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       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>File_Name</th>\n",
       "      <th>Parent</th>\n",
       "      <th>Full_Path</th>\n",
       "      <th>Modified</th>\n",
       "      <th>File_Size</th>\n",
       "      <th>File</th>\n",
       "      <th>Directory</th>\n",
       "      <th>tif_count</th>\n",
       "      <th>tif_files</th>\n",
       "      <th>TimeSeries_count</th>\n",
       "      <th>MIP_count</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>488</th>\n",
       "      <td>flyc_20190717-B06-1_stimDur300at15_00001</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>1.563503e+09</td>\n",
       "      <td>32768</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>300</td>\n",
       "      <td>[flyc_20190717-B06-1_stimDur300at15_00001_0013...</td>\n",
       "      <td>0</td>\n",
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       "    <tr>\n",
       "      <th>489</th>\n",
       "      <td>flyd_20190717-B06-3_stim30s06V_00001</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>1.563504e+09</td>\n",
       "      <td>32768</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>300</td>\n",
       "      <td>[flyd_20190717-B06-3_stim30s06V_00001_00032.ti...</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
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       "    <tr>\n",
       "      <th>490</th>\n",
       "      <td>flyd_20190717-B06-3_stimDur300at15_00001</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>1.563504e+09</td>\n",
       "      <td>32768</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>300</td>\n",
       "      <td>[flyd_20190717-B06-3_stimDur300at15_00001_0020...</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>491</th>\n",
       "      <td>flyf_20190717-B06-3_stimDur300at15_00001</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>1.563505e+09</td>\n",
       "      <td>36864</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>300</td>\n",
       "      <td>[flyf_20190717-B06-3_stimDur300at15_00001_0019...</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>492</th>\n",
       "      <td>flyc_20190717-B06-1_stim30s06V_00001</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>1.563503e+09</td>\n",
       "      <td>32768</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>300</td>\n",
       "      <td>[flyc_20190717-B06-1_stim30s06V_00001_00109.ti...</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>494</th>\n",
       "      <td>flye_20190717-B06-3_stimDur300at15_00001</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>1.563504e+09</td>\n",
       "      <td>32768</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>300</td>\n",
       "      <td>[flye_20190717-B06-3_stimDur300at15_00001_0002...</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>496</th>\n",
       "      <td>flya_20190717-B06-1_stim30s06V_00001</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>1.563502e+09</td>\n",
       "      <td>32768</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>300</td>\n",
       "      <td>[flya_20190717-B06-1_stim30s06V_00001_00193.ti...</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>502</th>\n",
       "      <td>flye_20190717-B06-3_stim30s06V_00001</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>1.563504e+09</td>\n",
       "      <td>28672</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>300</td>\n",
       "      <td>[flye_20190717-B06-3_stim30s06V_00001_00248.ti...</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>503</th>\n",
       "      <td>flya_20190717-B06-1_stimDur300at15_00001</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>1.563502e+09</td>\n",
       "      <td>32768</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>300</td>\n",
       "      <td>[flya_20190717-B06-1_stimDur300at15_00001_0012...</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>504</th>\n",
       "      <td>flyb_20190717-B06-1_stim30s06V_00001</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>1.563503e+09</td>\n",
       "      <td>32768</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>300</td>\n",
       "      <td>[flyb_20190717-B06-1_stim30s06V_00001_00226.ti...</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>507</th>\n",
       "      <td>flyf_20190717-B06-3_stim30s06V_00001</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>1.563504e+09</td>\n",
       "      <td>28672</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>300</td>\n",
       "      <td>[flyf_20190717-B06-3_stim30s06V_00001_00274.ti...</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>510</th>\n",
       "      <td>flyb_20190717-B06-1_stimDur300at15_00001</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...</td>\n",
       "      <td>1.563503e+09</td>\n",
       "      <td>36864</td>\n",
       "      <td>False</td>\n",
       "      <td>True</td>\n",
       "      <td>300</td>\n",
       "      <td>[flyb_20190717-B06-1_stimDur300at15_00001_0010...</td>\n",
       "      <td>0</td>\n",
       "      <td>0</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
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      ],
      "text/plain": [
       "                                    File_Name  \\\n",
       "488  flyc_20190717-B06-1_stimDur300at15_00001   \n",
       "489      flyd_20190717-B06-3_stim30s06V_00001   \n",
       "490  flyd_20190717-B06-3_stimDur300at15_00001   \n",
       "491  flyf_20190717-B06-3_stimDur300at15_00001   \n",
       "492      flyc_20190717-B06-1_stim30s06V_00001   \n",
       "494  flye_20190717-B06-3_stimDur300at15_00001   \n",
       "496      flya_20190717-B06-1_stim30s06V_00001   \n",
       "502      flye_20190717-B06-3_stim30s06V_00001   \n",
       "503  flya_20190717-B06-1_stimDur300at15_00001   \n",
       "504      flyb_20190717-B06-1_stim30s06V_00001   \n",
       "507      flyf_20190717-B06-3_stim30s06V_00001   \n",
       "510  flyb_20190717-B06-1_stimDur300at15_00001   \n",
       "\n",
       "                                                Parent  \\\n",
       "488  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...   \n",
       "489  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...   \n",
       "490  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...   \n",
       "491  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...   \n",
       "492  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...   \n",
       "494  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...   \n",
       "496  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...   \n",
       "502  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...   \n",
       "503  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...   \n",
       "504  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...   \n",
       "507  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...   \n",
       "510  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...   \n",
       "\n",
       "                                             Full_Path      Modified  \\\n",
       "488  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...  1.563503e+09   \n",
       "489  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...  1.563504e+09   \n",
       "490  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...  1.563504e+09   \n",
       "491  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...  1.563505e+09   \n",
       "492  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...  1.563503e+09   \n",
       "494  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...  1.563504e+09   \n",
       "496  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...  1.563502e+09   \n",
       "502  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...  1.563504e+09   \n",
       "503  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...  1.563502e+09   \n",
       "504  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...  1.563503e+09   \n",
       "507  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...  1.563504e+09   \n",
       "510  /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/201...  1.563503e+09   \n",
       "\n",
       "     File_Size   File  Directory  tif_count  \\\n",
       "488      32768  False       True        300   \n",
       "489      32768  False       True        300   \n",
       "490      32768  False       True        300   \n",
       "491      36864  False       True        300   \n",
       "492      32768  False       True        300   \n",
       "494      32768  False       True        300   \n",
       "496      32768  False       True        300   \n",
       "502      28672  False       True        300   \n",
       "503      32768  False       True        300   \n",
       "504      32768  False       True        300   \n",
       "507      28672  False       True        300   \n",
       "510      36864  False       True        300   \n",
       "\n",
       "                                             tif_files  TimeSeries_count  \\\n",
       "488  [flyc_20190717-B06-1_stimDur300at15_00001_0013...                 0   \n",
       "489  [flyd_20190717-B06-3_stim30s06V_00001_00032.ti...                 0   \n",
       "490  [flyd_20190717-B06-3_stimDur300at15_00001_0020...                 0   \n",
       "491  [flyf_20190717-B06-3_stimDur300at15_00001_0019...                 0   \n",
       "492  [flyc_20190717-B06-1_stim30s06V_00001_00109.ti...                 0   \n",
       "494  [flye_20190717-B06-3_stimDur300at15_00001_0002...                 0   \n",
       "496  [flya_20190717-B06-1_stim30s06V_00001_00193.ti...                 0   \n",
       "502  [flye_20190717-B06-3_stim30s06V_00001_00248.ti...                 0   \n",
       "503  [flya_20190717-B06-1_stimDur300at15_00001_0012...                 0   \n",
       "504  [flyb_20190717-B06-1_stim30s06V_00001_00226.ti...                 0   \n",
       "507  [flyf_20190717-B06-3_stim30s06V_00001_00274.ti...                 0   \n",
       "510  [flyb_20190717-B06-1_stimDur300at15_00001_0010...                 0   \n",
       "\n",
       "     MIP_count  \n",
       "488          0  \n",
       "489          0  \n",
       "490          0  \n",
       "491          0  \n",
       "492          0  \n",
       "494          0  \n",
       "496          0  \n",
       "502          0  \n",
       "503          0  \n",
       "504          0  \n",
       "507          0  \n",
       "510          0  "
      ]
     },
     "execution_count": 6,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "files"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 7,
   "metadata": {},
   "outputs": [],
   "source": [
    "time_path = []\n",
    "MIP_path = []\n",
    "for row, dseries in files.iterrows():\n",
    "    time_path.append(str(Path(dseries['Full_Path']) / str( dseries['File_Name'] + Time_str)))\n",
    "    MIP_path.append(str(Path(dseries['Full_Path']) / str( dseries['File_Name'] + MIP_str)))\n",
    "files['TimeSeries_Output_HDF5'] = time_path\n",
    "files['MIP_Output_HDF5'] = MIP_path\n",
    "files.to_excel(str(Path(targetfolder) / 'GenerateTimeSeriesImages.xlsx'))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 8,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "\"\\nrow = files[files['File_Name'].str.contains('flyc_20190617-A99-3_LED-06_Interval-31_00001')]\\ndseries = row.iloc[0]\\ntype(dseries)\\ncc.generateHDFfromStackedTimeSeries(dseries['TimeSeries_Output_HDF5'], dseries['MIP_Output_HDF5'], dseries['Full_Path'], dseries['tif_files'])\\n\""
      ]
     },
     "execution_count": 8,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "#for troubleshooting\n",
    "'''\n",
    "row = files[files['File_Name'].str.contains('flyc_20190617-A99-3_LED-06_Interval-31_00001')]\n",
    "dseries = row.iloc[0]\n",
    "type(dseries)\n",
    "cc.generateHDFfromStackedTimeSeries(dseries['TimeSeries_Output_HDF5'], dseries['MIP_Output_HDF5'], dseries['Full_Path'], dseries['tif_files'])\n",
    "'''"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 9,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "Starting to convert timeseries data.\n",
      "Starting : /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/20190717/flyc_20190717-B06-1_stimDur300at15_00001\n"
     ]
    },
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n"
     ]
    },
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "Starting : /run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/20190717/flyd_20190717-B06-3_stim30s06V_00001\n"
     ]
    },
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n",
      "/groups/projtechres/home/busheyd/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/utils.py:101: ComplexWarning: Casting complex values to real discards the imaginary part\n",
      "  nparr = numpy.array(nparr, dtype=atom.dtype, copy=copy)\n"
     ]
    },
    {
     "ename": "HDF5ExtError",
     "evalue": "Problems creating the Array.",
     "output_type": "error",
     "traceback": [
      "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
      "\u001b[0;31mHDF5ExtError\u001b[0m                              Traceback (most recent call last)",
      "\u001b[0;32m<ipython-input-9-ab8910b72f29>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[1;32m      2\u001b[0m \u001b[0;32mfor\u001b[0m \u001b[0mrow\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mdseries\u001b[0m \u001b[0;32min\u001b[0m \u001b[0mfiles\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0miterrows\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      3\u001b[0m     \u001b[0mprint\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m'Starting :'\u001b[0m \u001b[0;34m,\u001b[0m \u001b[0mdseries\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m'Full_Path'\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m----> 4\u001b[0;31m     \u001b[0mcc\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mgenerateHDFfromStackedTimeSeries\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mdseries\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m'TimeSeries_Output_HDF5'\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mdseries\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m'MIP_Output_HDF5'\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mdseries\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m'Full_Path'\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mdseries\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m'tif_files'\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m      5\u001b[0m \u001b[0mprint\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m'Finished converting Tif files to HDF5.'\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/run/media/busheyd/dr1Tba/DataJ-dr1TBa/B06/CircuitCatcher/ccModules.py\u001b[0m in \u001b[0;36mgenerateHDFfromStackedTimeSeries\u001b[0;34m(outputTime_Series, output_MIPtime, path, fastz_tif)\u001b[0m\n\u001b[1;32m   1764\u001b[0m                 \u001b[0mser1\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0mctag\u001b[0m\u001b[0;34m]\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mstr\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mstackmetadata\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0mcstack\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0mcimg\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0mctag\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m   1765\u001b[0m             \u001b[0mmetaframe\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mmetaframe\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mappend\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mser1\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mignore_index\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;32mTrue\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 1766\u001b[0;31m     \u001b[0mmetaframe\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mto_hdf\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0moutputTime_Series\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m'/metadata'\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m   1767\u001b[0m     '''\n\u001b[1;32m   1768\u001b[0m     \u001b[0;31m#how to read meta data\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/pandas/core/generic.py\u001b[0m in \u001b[0;36mto_hdf\u001b[0;34m(self, path_or_buf, key, **kwargs)\u001b[0m\n\u001b[1;32m   2375\u001b[0m         \"\"\"\n\u001b[1;32m   2376\u001b[0m         \u001b[0;32mfrom\u001b[0m \u001b[0mpandas\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mio\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mpytables\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 2377\u001b[0;31m         \u001b[0;32mreturn\u001b[0m \u001b[0mpytables\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mto_hdf\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mpath_or_buf\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mkey\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0mkwargs\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m   2378\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m   2379\u001b[0m     \u001b[0;32mdef\u001b[0m \u001b[0mto_msgpack\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mpath_or_buf\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;32mNone\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mencoding\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;34m'utf-8'\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0mkwargs\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/pandas/io/pytables.py\u001b[0m in \u001b[0;36mto_hdf\u001b[0;34m(path_or_buf, key, value, mode, complevel, complib, append, **kwargs)\u001b[0m\n\u001b[1;32m    272\u001b[0m         with HDFStore(path_or_buf, mode=mode, complevel=complevel,\n\u001b[1;32m    273\u001b[0m                       complib=complib) as store:\n\u001b[0;32m--> 274\u001b[0;31m             \u001b[0mf\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mstore\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    275\u001b[0m     \u001b[0;32melse\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    276\u001b[0m         \u001b[0mf\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mpath_or_buf\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/pandas/io/pytables.py\u001b[0m in \u001b[0;36m<lambda>\u001b[0;34m(store)\u001b[0m\n\u001b[1;32m    266\u001b[0m         \u001b[0mf\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;32mlambda\u001b[0m \u001b[0mstore\u001b[0m\u001b[0;34m:\u001b[0m \u001b[0mstore\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mappend\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mkey\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mvalue\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0mkwargs\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    267\u001b[0m     \u001b[0;32melse\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 268\u001b[0;31m         \u001b[0mf\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;32mlambda\u001b[0m \u001b[0mstore\u001b[0m\u001b[0;34m:\u001b[0m \u001b[0mstore\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mput\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mkey\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mvalue\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0mkwargs\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    269\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    270\u001b[0m     \u001b[0mpath_or_buf\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0m_stringify_path\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mpath_or_buf\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/pandas/io/pytables.py\u001b[0m in \u001b[0;36mput\u001b[0;34m(self, key, value, format, append, **kwargs)\u001b[0m\n\u001b[1;32m    887\u001b[0m             \u001b[0mformat\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mget_option\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m\"io.hdf.default_format\"\u001b[0m\u001b[0;34m)\u001b[0m \u001b[0;32mor\u001b[0m \u001b[0;34m'fixed'\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    888\u001b[0m         \u001b[0mkwargs\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_validate_format\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mformat\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mkwargs\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 889\u001b[0;31m         \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_write_to_group\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mkey\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mvalue\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mappend\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mappend\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0mkwargs\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    890\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    891\u001b[0m     \u001b[0;32mdef\u001b[0m \u001b[0mremove\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mkey\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mwhere\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;32mNone\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mstart\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;32mNone\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mstop\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;32mNone\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/pandas/io/pytables.py\u001b[0m in \u001b[0;36m_write_to_group\u001b[0;34m(self, key, value, format, index, append, complib, encoding, **kwargs)\u001b[0m\n\u001b[1;32m   1413\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m   1414\u001b[0m         \u001b[0;31m# write the object\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 1415\u001b[0;31m         \u001b[0ms\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mwrite\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mobj\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mvalue\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mappend\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mappend\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mcomplib\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mcomplib\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m**\u001b[0m\u001b[0mkwargs\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m   1416\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m   1417\u001b[0m         \u001b[0;32mif\u001b[0m \u001b[0ms\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mis_table\u001b[0m \u001b[0;32mand\u001b[0m \u001b[0mindex\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/pandas/io/pytables.py\u001b[0m in \u001b[0;36mwrite\u001b[0;34m(self, obj, **kwargs)\u001b[0m\n\u001b[1;32m   3012\u001b[0m                     raise ValueError(\n\u001b[1;32m   3013\u001b[0m                         \"Columns index has to be unique for fixed format\")\n\u001b[0;32m-> 3014\u001b[0;31m             \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mwrite_index\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m'axis{idx}'\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mformat\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0midx\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mi\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0max\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m   3015\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m   3016\u001b[0m         \u001b[0;31m# Supporting mixed-type DataFrame objects...nontrivial\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/pandas/io/pytables.py\u001b[0m in \u001b[0;36mwrite_index\u001b[0;34m(self, key, index)\u001b[0m\n\u001b[1;32m   2595\u001b[0m                                        self.format_type).set_name('index')\n\u001b[1;32m   2596\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 2597\u001b[0;31m             \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mwrite_array\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mkey\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mconverted\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mvalues\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m   2598\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m   2599\u001b[0m             \u001b[0mnode\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mgetattr\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mgroup\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mkey\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/pandas/io/pytables.py\u001b[0m in \u001b[0;36mwrite_array\u001b[0;34m(self, key, value, items)\u001b[0m\n\u001b[1;32m   2810\u001b[0m                         self.group, key)._v_attrs.value_type = 'timedelta64'\n\u001b[1;32m   2811\u001b[0m                 \u001b[0;32melse\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 2812\u001b[0;31m                     \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_handle\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mcreate_array\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mgroup\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mkey\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mvalue\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m   2813\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m   2814\u001b[0m         \u001b[0mgetattr\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mgroup\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mkey\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_v_attrs\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mtransposed\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mtransposed\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/file.py\u001b[0m in \u001b[0;36mcreate_array\u001b[0;34m(self, where, name, obj, title, byteorder, createparents, atom, shape, track_times)\u001b[0m\n\u001b[1;32m   1166\u001b[0m         return Array(parentnode, name,\n\u001b[1;32m   1167\u001b[0m                      \u001b[0mobj\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mobj\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mtitle\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mtitle\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mbyteorder\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mbyteorder\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 1168\u001b[0;31m                      track_times=track_times)\n\u001b[0m\u001b[1;32m   1169\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m   1170\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/array.py\u001b[0m in \u001b[0;36m__init__\u001b[0;34m(self, parentnode, name, obj, title, byteorder, _log, _atom, track_times)\u001b[0m\n\u001b[1;32m    195\u001b[0m         \u001b[0;31m# Ordinary arrays have no filters: leaf is created with default ones.\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    196\u001b[0m         super(Array, self).__init__(parentnode, name, new, Filters(),\n\u001b[0;32m--> 197\u001b[0;31m                                     byteorder, _log, track_times)\n\u001b[0m\u001b[1;32m    198\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    199\u001b[0m     \u001b[0;32mdef\u001b[0m \u001b[0m_g_create\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/leaf.py\u001b[0m in \u001b[0;36m__init__\u001b[0;34m(self, parentnode, name, new, filters, byteorder, _log, track_times)\u001b[0m\n\u001b[1;32m    288\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    289\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 290\u001b[0;31m         \u001b[0msuper\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mLeaf\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m__init__\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mparentnode\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mname\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0m_log\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    291\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    292\u001b[0m     \u001b[0;32mdef\u001b[0m \u001b[0m__len__\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/node.py\u001b[0m in \u001b[0;36m__init__\u001b[0;34m(self, parentnode, name, _log)\u001b[0m\n\u001b[1;32m    264\u001b[0m             \u001b[0;31m#   Create or open the node and get its object ID.\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    265\u001b[0m             \u001b[0;32mif\u001b[0m \u001b[0mnew\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 266\u001b[0;31m                 \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_v_objectid\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_g_create\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m    267\u001b[0m             \u001b[0;32melse\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    268\u001b[0m                 \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_v_objectid\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_g_open\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/.local/share/virtualenvs/CircuitCatcher2-WgyRvAAM/lib/python3.7/site-packages/tables/array.py\u001b[0m in \u001b[0;36m_g_create\u001b[0;34m(self)\u001b[0m\n\u001b[1;32m    227\u001b[0m             \u001b[0;31m# on\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    228\u001b[0m             (self._v_objectid, self.shape, self.atom) = self._create_array(\n\u001b[0;32m--> 229\u001b[0;31m                 nparr, self._v_new_title, self.atom)\n\u001b[0m\u001b[1;32m    230\u001b[0m         \u001b[0;32mexcept\u001b[0m\u001b[0;34m:\u001b[0m  \u001b[0;31m# XXX\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m    231\u001b[0m             \u001b[0;31m# Problems creating the Array on disk. Close node and re-raise.\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32mtables/hdf5extension.pyx\u001b[0m in \u001b[0;36mtables.hdf5extension.Array._create_array\u001b[0;34m()\u001b[0m\n",
      "\u001b[0;31mHDF5ExtError\u001b[0m: Problems creating the Array."
     ]
    }
   ],
   "source": [
    "print('Starting to convert timeseries data.')\n",
    "for row, dseries in files.iterrows():\n",
    "    print('Starting :' , dseries['Full_Path'])\n",
    "    cc.generateHDFfromStackedTimeSeries(dseries['TimeSeries_Output_HDF5'], dseries['MIP_Output_HDF5'], dseries['Full_Path'], dseries['tif_files'])\n",
    "print('Finished converting Tif files to HDF5.')"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": []
  }
 ],
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