Skip to content

Latest commit

 

History

History
13 lines (10 loc) · 419 Bytes

README.md

File metadata and controls

13 lines (10 loc) · 419 Bytes

SlideRunner dataAccess

This is the dataaccess auxilliary package for SlideRunner, an open source microscopy (and, actually, many other image formats) annotation tool.

Since the SlideRunner database format and the slide wrapper are used in other packages as well, we split it up.

Requirements:

  • openslide-python>=1.1.1
  • opencv-python>=3.1.0
  • nibabel>=3.1.1
  • matplotlib>=2.0.0
  • numpy>=1.13
  • pydicom>=2.1.2