mkdocs.yml

site_name: LORIS
repo_url: https://github.com/aces/Loris
nav:
    - Home: 'index.md'
    - Wiki: 'wiki/index.md'
    - Server Install and Configuration: 
        - 'Prerequisities and Assumptions': 'wiki/00 - SERVER INSTALL AND CONFIGURATION/00 - Prerequisites And Assumptions/README.md'
        - 'Database Configuration': 'wiki/00 - SERVER INSTALL AND CONFIGURATION/00 - Prerequisites And Assumptions/Database Configuration.md'
        - Installation:
            - 'Ubuntu Install': 'wiki/00 - SERVER INSTALL AND CONFIGURATION/01 - LORIS Install/Ubuntu/README.md'
            - 'CentOS Install': 'wiki/00 - SERVER INSTALL AND CONFIGURATION/01 - LORIS Install/CentOS/README.md'
        - Website Configuration: 
            - 'Website Configuration': 'wiki/00 - SERVER INSTALL AND CONFIGURATION/02 - Website Configuration/README.md'
            - 'Handling Large File Uploads': 'wiki/00 - SERVER INSTALL AND CONFIGURATION/02 - Website Configuration/Handling Large File Uploads.md'
            - 'Enabling reCAPTCHA': 'wiki/99\ -\ Developers/reCAPTCHA.md docs/wiki/00\ -\ SERVER\ INSTALL\ AND\ CONFIGURATION/02\ -\ Website\ Configuration/reCAPTCHA.md'
    - Study Parameters Setup:
        - Study Variables: 
            - 'Introduction': 'wiki/01 - STUDY PARAMETERS SETUP/01 - Study Variables/00 - Introduction to Study Variables.md'
            - 'Projects': 'wiki/01 - STUDY PARAMETERS SETUP/01 - Study Variables/02 - Projects.md'
            - 'Sites': 'wiki/01 - STUDY PARAMETERS SETUP/01 - Study Variables/03 - Sites.md'
            - 'Subprojects': 'wiki/01 - STUDY PARAMETERS SETUP/01 - Study Variables/04 - Subprojects.md'
            - 'Timepoints': 'wiki/01 - STUDY PARAMETERS SETUP/01 - Study Variables/05 - Timepoints.md'
        - Clinical Instruments: 'wiki/01 - STUDY PARAMETERS SETUP/02 - Clinical Instruments/README.md'
        - Modules: 'wiki/01 - STUDY PARAMETERS SETUP/03 - Loris Modules/README.md'

            
    - Getting Started: 'wiki/02 - GETTING STARTED/README.md'
    - Help and Troubleshooting: 'wiki/03 - HELP AND TROUBLESHOOTING/README.md'
    - API: 'API/LorisRESTAPI.md'
    - Developers: 
        - 'Overview': 'wiki/99 - Developers/README.md'
        - 'Coding Standards': 'CodingStandards.md'
        - 'SQL Dictionary': 'wiki/99 - Developers/SQL Dictionary.md'
        - 'Automated Testing': 'wiki/99 - Developers/Automated Testing.md'
        - 'Style Guide (for help text)': 'HelpStyleGuide.md'
theme: readthedocs