From 0e295ae4411c41522ae460462e78dc32116668dc Mon Sep 17 00:00:00 2001
From: Rida Abou-Haidar <rida.abou-haidar@mcin.ca>
Date: Mon, 2 Dec 2024 07:12:29 -0500
Subject: [PATCH] fixing lint

---
 modules/biobank/jsx/header.js           |  3 +++
 modules/biobank/jsx/poolSpecimenForm.js | 33 ++++++++++++++-----------
 modules/biobank/jsx/specimenForm.js     |  8 +++---
 3 files changed, 25 insertions(+), 19 deletions(-)

diff --git a/modules/biobank/jsx/header.js b/modules/biobank/jsx/header.js
index 168ecb18f84..bda295a5679 100644
--- a/modules/biobank/jsx/header.js
+++ b/modules/biobank/jsx/header.js
@@ -220,6 +220,9 @@ Header.propTypes = {
     coordinate: PropTypes.string,
   }).isRequired,
   specimen: PropTypes.shape({
+    barcode: PropTypes.string,
+    candidatePSCID: PropTypes.string,
+    sampleNumber: PropTypes.string,
     quantity: PropTypes.number,
     poolId: PropTypes.number,
     typeId: PropTypes.number.isRequired,
diff --git a/modules/biobank/jsx/poolSpecimenForm.js b/modules/biobank/jsx/poolSpecimenForm.js
index abc9d26e2f8..fc8e3abbc6a 100644
--- a/modules/biobank/jsx/poolSpecimenForm.js
+++ b/modules/biobank/jsx/poolSpecimenForm.js
@@ -21,7 +21,7 @@ const initialState = {
     candidateId: null,
     sessionid: null,
     typeId: null,
-    centerId: null
+    centerId: null,
   },
   poolId: null,
   count: 0,
@@ -40,7 +40,7 @@ class PoolSpecimenForm extends React.Component {
     super();
     this.state = initialState;
     this.setPool = this.setPool.bind(this);
-    this.setFilter = this.setFilter.bind(this);    
+    this.setFilter = this.setFilter.bind(this);
     this.validateListItem = this.validateListItem.bind(this);
     this.setPoolList = this.setPoolList.bind(this);
   }
@@ -64,7 +64,6 @@ class PoolSpecimenForm extends React.Component {
    * @param {string} value - the filter values
    */
   setFilter(name, value) {
-    console.log(name+': '+value);
     const {filter} = clone(this.state);
 
     if (name == 'candidateId') {
@@ -73,7 +72,7 @@ class PoolSpecimenForm extends React.Component {
 
     filter[name] = value;
     this.setState({filter});
-  }  
+  }
 
   /**
    * Sets the current pool list
@@ -81,7 +80,7 @@ class PoolSpecimenForm extends React.Component {
    * @param {number} containerId - specimen to be added to pool via containerId
    */
   setPoolList(containerId) {
-    let {current, list, pool, count} = clone(this.state);
+    let {filter, list, pool, count} = clone(this.state);
 
     // Increase count
     count++;
@@ -95,7 +94,7 @@ class PoolSpecimenForm extends React.Component {
       filter.candidateId = specimen.candidateId;
       filter.sessionId = specimen.sessionId;
       filter.typeId = specimen.typeId;
-      filter.centerId = container.centerId;      
+      filter.centerId = container.centerId;
     }
 
     // Set list values
@@ -147,7 +146,7 @@ class PoolSpecimenForm extends React.Component {
     const specimen = this.props.data.specimens[container.specimenId];
 
     // Throw error if new list item does not meet requirements.
-    if (!isEmpty(list) 
+    if (!isEmpty(list)
       && (specimen.candidateId != filter.candidateId
       || specimen.sessionId != filter.sessionId
       || specimen.typeId != filter.typeId
@@ -236,7 +235,10 @@ class PoolSpecimenForm extends React.Component {
               onUserInput={this.setFilter}
               disabled={!isEmpty(list) || !filter.candidateId}
               value={filter.sessionId}
-              options={mapFormOptions((options?.candidateSessions?.[filter.candidateId] || {}), 'label')}
+              options={mapFormOptions(
+                (options?.candidateSessions?.[filter.candidateId] || {}),
+                'label'
+              )}
             />
             <div className='row'>
               <div className='col-xs-6'>
@@ -348,12 +350,8 @@ PoolSpecimenForm.propTypes = {
       })
     ).isRequired,
   }).isRequired,
-  filter: PropTypes.shape({
-    candidateId: PropTypes.string,
-    sessionId: PropTypes.string,
-    typeId: PropTypes.string,
-  }).isRequired,
   options: PropTypes.shape({
+    candidateSessions: PropTypes.obj,
     specimen: PropTypes.shape({
       units: PropTypes.string,
       types: PropTypes.arrayOf(PropTypes.string),
@@ -395,7 +393,7 @@ class BarcodeInput extends PureComponent {
             const sessionMatch = !filter.sessionId
               || specimen.sessionId == filter.sessionId;
             const typeMatch = !filter.typeId
-              || specimen.typeId == filter.typeId;            
+              || specimen.typeId == filter.typeId;
 
             if (specimen.quantity > 0
                 && container.statusId == availableId
@@ -404,7 +402,7 @@ class BarcodeInput extends PureComponent {
                 && candidateMatch
                 && sessionMatch
                 && typeMatch
-            ) {              
+            ) {
               result[container.id] = container.barcode;
             }
           }
@@ -444,6 +442,11 @@ BarcodeInput.propTypes = {
       })
     ).isRequired,
   }).isRequired,
+  filter: PropTypes.shape({
+    candidateId: PropTypes.string,
+    sessionId: PropTypes.string,
+    typeId: PropTypes.string,
+  }).isRequired,
   options: PropTypes.shape({
     container: PropTypes.shape({
       types: PropTypes.arrayOf(
diff --git a/modules/biobank/jsx/specimenForm.js b/modules/biobank/jsx/specimenForm.js
index 489f0d3dca2..1a4cb9b2f8b 100644
--- a/modules/biobank/jsx/specimenForm.js
+++ b/modules/biobank/jsx/specimenForm.js
@@ -164,7 +164,9 @@ class SpecimenForm extends React.Component {
    */
   async fetchBarcodes(limit) {
     try {
-      const response = await fetch(`${loris.BaseURL}/biobank/barcodes?limit=${limit}`);
+      const response = await fetch(
+        `${loris.BaseURL}/biobank/barcodes?limit=${limit}`
+      );
       const data = await response.json();
       return data.barcodes;
     } catch (error) {
@@ -177,12 +179,10 @@ class SpecimenForm extends React.Component {
    * Generate barcodes and store in the component state.
    */
   async generateBarcodes() {
-    const {options} = this.props;
-    let {list, current} = this.state;
+    let {list} = this.state;
     const limit = Object.keys(list).length;
 
     const barcodes = await this.fetchBarcodes(limit);
-    console.log(barcodes);
 
     list = Object.keys(list).reduce((result, key, index) => {
       const specimen = list[key];