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issue running obsmon 4.2.0 with R 4.1.0 in mode batch #18

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hdidoufatima opened this issue Nov 29, 2021 · 2 comments
Open

issue running obsmon 4.2.0 with R 4.1.0 in mode batch #18

hdidoufatima opened this issue Nov 29, 2021 · 2 comments

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@hdidoufatima
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I have installed obsmon 4.2.0 with R 4.1.0. While running obsmon in mode batch with the line command ./obsmon --batch, I'm getting the following warning
" WARN [2021-11-25 11:21:04] makeBatchPlots: Could not detect any batch-enabled multiPlot", and no plot is produced.
The config.toml file used is as follows:

[general]
logLevel = "INFO"
cacheDir="/home/hdiddou/.obsmon/experiments_cache/"
[[experiments]]
displayName = "First Experiment"
path = "/home/hdiddou/Desktop/newspace/OBSMON_ROGER/SQLITE/expdata_carra_amv_tovs"
[[multiPlots]]
displayName = "A minimal multiPlot config entry"
experiment = "First Experiment"
plotType = "Observations Map"
database = "ecma"
startDate = "2016-07-02"
endDate = "2016-07-02"
cycles = ["03","06","09"]
[multiPlots.obs]
synop=["t2m","rh2m"]
[multiplots.batchMode]
parentDir= "/home/hdiddou/"
dirName= "obsmon_batch_mode_plots"

I tried the option "batchMode = true" instead of "[multiplots.batchMode]", the issue remains.

@paulovcmedeiros
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Hi @hdidoufatima ,

Does the multiPlot itself work? I mean, if you go to the GUI and look under the "User-configured multiPlots" tab, is this multiPlot shown there?

Also, to help troubleshooting, could you also attach your ful log?

@hdidoufatima
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Hi @paulovcmedeiros

Yes, the multiplot works very well. Under "User-configured multiPlots" tab, when I click on "Make multiplot", I get a multiplot Figure.

Here is the log of the batch mode running:

hdiddou@hdiddou-HP-ProDesk-600-G1-SFF:~/obsmon$ ./obsmon --batch


/ __ | |
| | | | |__ ___ _ __ ___ ___ _ __
| | | | '_ / | ' ` _ \ / _ | ' \
| || | |) _ \ | | | | | () | | | |
_
/|./|/| || ||___/|| |_|

              v4.2.0

Branch: master
Tag: obsmon-4.2.0-dirty
Commit: 4e88a26
Commit date: 2021-10-04 12:22:09 +0200

Initializing Obsmon...
For a list of available options, please use the "-h" argument.

Looking for R-libs in the following directories (listed in order of priority):
> /home/hdiddou/obsmon/.installer_local_R-libs/R-libs
> /home/hdiddou/R/x86_64-pc-linux-gnu-library/4.1
> /usr/local/lib/R/library

INFO [2021-12-03 15:25:32] Main process PID: 21915
INFO [2021-12-03 15:25:32] Running as user "hdiddou"
INFO [2021-12-03 15:25:32] Config file found: /home/hdiddou/obsmon/config.toml

WARN [2021-12-03 15:25:33] makeBatchPlots: Could not detect any batch-enabled multiPlot.

===============
Exiting Obsmon.

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