.gitignore

*.hpo
.DS_Store
CODI_metadata/3Jan2019_UDN_Variants_all.csv
CODI_metadata/all.txt
CODI_metadata/auth.json
CODI_metadata/missing.txt
CODI_metadata/sample_info_dump_v3.csv
CLI_primary_V6*
data
exomiser_results/
exomiser_results_v2/
paper/*.sty
paper/*.png
paper/*rendered*.tex
paper/bioinfo.cls
paper/crop.cfg
paper/main.aux
paper/main.bbl
paper/main.log
paper/main.synctex.gz
paper/natbib.bst
paper/OUP_First_SBk_Bot_8401-eps-converted-to.pdf
paper/OUP_First_SBk_Bot_8401.eps
paper/plain.bst
paper/supplements/*rendered*.tex
paper/supplements/filter_supplement_layer?.dot
paper/supplements/filter_supplement_layer?.png
paper/supplements/filter_supplement_overall.dot
paper/supplements/filter_supplement_overall.png
paper/supplements/supplement.aux
paper/supplements/supplement.log
paper/supplements/supplement.synctex.gz
paper/supplements/supplement.toc
phengen_results/
pvp_results/
pyxis_ranks_*
scripts/__pycache__
scripts/DownloadCodiResults.py
scripts/FindCompletedSamples.py
scripts/PrepSampleData.sh
scripts/ConvertCodiToVCF.py
vcf_conversion/