Could an overall term expressing that a participant has provided informed consent be added?

[Public-Health-Bioinformatics]

This is just one step away from the details of the form itself. I'm trying to encode a generic "Was consent obtained by patients" for sharing of their data in a particular aspect. ICO provides a lot of detail regarding who signed what (e.g. "informed consent form signed by human subject" ) but doesn't it make sense to have a summary phrase to represent the outcome of the whole process, e.g. "subject provided informed consent" and "subject refused informed consent"? Thx...

[fjmanion]

We are having a call of members of the ICO team today where I hope to discuss this item. Sorry for the delay. I have thought about the need to have a concept/class such as "legally effective informed consent obtained". Do you think this would address your issue?

[Public-Health-Bioinformatics]

something like that would be great - but it will need to have at least two states. One in which consent is obtained on a given matter, another where it was "refused" or "declined". A person can participate in an overall study but decline to share certain results to 3rd parties (or publicly) for example.

[Public-Health-Bioinformatics]

Any outcome yet on this? I have a few terms in GenEpiO ontology covering this that I'd rather use your ID's for. Thx.

[fjmanion]

Hi Damion, Sorry for the long delay over the holidays. We have put a proposal together and will be discussing it today with members of the OBO Foundry and OBI. I've attached a slide that shows our proposal. See if this works for you. We would also be interested in other thoughts and use cases that ICO is not addressing at the moment or needs to include. We are currently working through a list of about 30 or so missing classes/terms that will be added. However, Oliver He and I feel we can address yours very quickly if the team approves this afternoon. I'll try to do a better job keeping you appraised of our progress. Regards, -- Frank *Frank J. Manion* Chief Informatics Officer Univ. of Michigan Comprehensive Cancer Center 1600 Huron Parkway, Bldg 100, Room 131 Ann Arbor, MI 48109-2800 Email: [email protected] | Web: http://cci.med.umich.edu/ Office: (734) 764-2473 | Cell: (734) 276-0111 | Fax: (734) 615-0507 Assistant: Lisa Papp ([email protected]) (734) 764-8848

…

On Wed, Feb 8, 2017 at 2:29 PM, Damion Dooley ***@***.***> wrote: Any outcome yet on this? I have a few terms in GenEpiO ontology covering this that I'd rather use your ID's for. Thx. — You are receiving this because you were assigned. Reply to this email directly, view it on GitHub <#3 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ABGiGnxN0xgn_GH5hoH4k5JFs2qcKcnUks5raheZgaJpZM4LCQfW> .

[Public-Health-Bioinformatics]

Sounds good! I think maybe the diagram attachment got dropped though?

[fjmanion]

GIT probably wiped it out since I sent it from an email client - I was unsure if GIT would accept the attachment or not. Here, in text, is the essence of our proposal. -- Frank •[BPV 770] Status of consenting (realizable entity) –Legally effective consenting (planned process) •Legally effective informed consent given •Legally effective informed consent refused (disjoint with ‘given’) •[BPV 761] Candidate meets eligibility criteria indicator –Eligibility of candidate participation (realizable entity) –Candidate eligible for study –Candidate ineligible for study (disjoint with ‘eligible’)

…

On 2/9/2017 12:49 PM, Damion Dooley wrote: Sounds good! I think maybe the diagram attachment got dropped though? — You are receiving this because you were assigned. Reply to this email directly, view it on GitHub <#3 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ABGiGqVJxlDTkK32aFYUMBBs4HtIPCDyks5ra1G1gaJpZM4LCQfW>.

-- *Frank J. Manion* Chief Informatics Officer Univ. of Michigan Comprehensive Cancer Center 1600 Huron Parkway, Bldg 100, Room 131 Ann Arbor, MI 48109-2800 Email: [email protected] | Web: http://cci.med.umich.edu/ Office: (734) 764-2473 | Cell: (734) 276-0111 | Fax: (734) 615-0507 Assistant: Lisa Papp ([email protected]) (734) 764-8848

[Public-Health-Bioinformatics]

Ok. It looks like the above is not quite in Ontobee version of ICO yet?