From e6ab27da0486fa55157e13c21ebd75d94a125937 Mon Sep 17 00:00:00 2001
From: Christopher Lorton <clorton@gatesfoundation.org>
Date: Mon, 3 Feb 2025 15:51:19 -0800
Subject: [PATCH] =?UTF-8?q?=F0=9F=9A=A7=20WIP=20infrastructure=20and=20?=
 =?UTF-8?q?=F0=9F=93=9D=20docs?=
MIME-Version: 1.0
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---
 .github/workflows/github-actions.yml | 11 ++++++-----
 MANIFEST.in                          |  2 ++
 docs/reference/laser_generic.rst     |  8 ++++++++
 pyproject.toml                       |  5 +++++
 4 files changed, 21 insertions(+), 5 deletions(-)

diff --git a/.github/workflows/github-actions.yml b/.github/workflows/github-actions.yml
index 4475fab..f82bacc 100644
--- a/.github/workflows/github-actions.yml
+++ b/.github/workflows/github-actions.yml
@@ -89,7 +89,7 @@ jobs:
             python_arch: 'x64'
             tox_env: 'py311'
             cibw_arch: 'x86_64'
-            cibw_build: false
+            cibw_build: 'cp39-manylinux_x86_64'
             os: 'ubuntu-latest'
           - name: 'py311 (windows/AMD64)'
             python: '3.11'
@@ -97,7 +97,7 @@ jobs:
             python_arch: 'x64'
             tox_env: 'py311'
             cibw_arch: 'AMD64'
-            cibw_build: false
+            cibw_build: 'cp39-win_amd64'
             os: 'windows-latest'
           - name: 'py311 (macos/x86_64)'
             python: '3.11'
@@ -105,7 +105,7 @@ jobs:
             python_arch: 'x64'
             tox_env: 'py311'
             cibw_arch: 'x86_64'
-            cibw_build: false
+            cibw_build: 'cp39-macosx_x86_64'
             os: 'macos-13'
           - name: 'py311 (macos/arm64)'
             python: '3.11'
@@ -113,7 +113,7 @@ jobs:
             python_arch: 'arm64'
             tox_env: 'py311'
             cibw_arch: 'arm64'
-            cibw_build: false
+            cibw_build: 'cp39-macosx_arm64'
             os: 'macos-latest'
           - name: 'py312 (ubuntu/x86_64)'
             python: '3.12'
@@ -199,9 +199,10 @@ jobs:
       if: matrix.cibw_build
       run: twine check wheelhouse/*.whl
     - name: upload wheel
-      uses: actions/upload-artifact@v3
+      uses: actions/upload-artifact@v4
       if: matrix.cibw_build
       with:
+        name: ${{ matrix.cibw_build }}
         path: wheelhouse/*.whl
   finish:
     needs: test
diff --git a/MANIFEST.in b/MANIFEST.in
index 35a58fe..3e1543b 100644
--- a/MANIFEST.in
+++ b/MANIFEST.in
@@ -20,4 +20,6 @@ include LICENSE
 include README.rst
 
 recursive-exclude notebooks *.ipynb
+recursive-exclude notebooks *.png
+
 global-exclude *.py[cod] __pycache__/* *.so *.dylib
diff --git a/docs/reference/laser_generic.rst b/docs/reference/laser_generic.rst
index b5ba6b8..ddd5523 100644
--- a/docs/reference/laser_generic.rst
+++ b/docs/reference/laser_generic.rst
@@ -33,6 +33,14 @@ laser\_generic.core module
    :undoc-members:
    :show-inheritance:
 
+laser\_generic.importation module
+---------------------------------
+
+.. automodule:: laser_generic.importation
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
 laser\_generic.infection module
 -------------------------------
 
diff --git a/pyproject.toml b/pyproject.toml
index 51e16d2..3f1f758 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -64,6 +64,11 @@ Changelog = "https://github.com/InstituteforDiseaseModeling/laser-generic/blob/m
 [project.scripts]
 generic = "laser_generic.cli:run"
 
+[tool.setuptools]
+ext-modules = [
+  {name = "_core", sources = ["src/laser_generic/_core.c"]}
+]
+
 [tool.ruff]
 extend-exclude = ["static", "ci/templates"]
 line-length = 140