Problem using readAnnotatedTree function

[BioinfoNovice]

Hi,

First of all, thank you very much for the package.
I'm trying to use it with my data. I was able to generate the results table. However, when I executed the 'readAnnotatedTree' function, I had an error message:

Error in FUN(X[[i]], ...) : attempt to set index -57/52 in SET_STRING_ELT

What does this mean? What could be the cause of this error?

[JosephCrispell]

Hi!

Sorry for my extremely slow reply and thanks for using HomoplasyFinder! Would you be able to share the annotated tree and results files with me and I'll see if I can replicate?

Also can you share the exact R code running when you get the error?

Thanks!

Joe