diff --git a/Demo-notebooks/Evaluation.ipynb b/Demo-notebooks/Evaluation.ipynb index f755b8a..0ccfc44 100644 --- a/Demo-notebooks/Evaluation.ipynb +++ b/Demo-notebooks/Evaluation.ipynb @@ -33,7 +33,6 @@ "source": [ "# Import libraries\n", "import sys\n", - "import random\n", "import numpy as np\n", "import torch\n", "import torchio as tio\n", @@ -43,33 +42,21 @@ "from src.preprocessing import get_transforms, get_datasets, get_dataloaders, add_vessel_contrast\n", "# from src.config import config\n", "from src.drr import create_drr\n", - "from src.vizualization import plot_results, plot_drr_enhancement\n", "import src.training\n", "\n", "import torch\n", "import matplotlib.pyplot as plt\n", - "from diffdrr.visualization import plot_drr, plot_mask\n", "\n", "import torch\n", "import matplotlib.pyplot as plt\n", "\n", "import matplotlib.pyplot as plt\n", "\n", - "from diffdrr.drr import DRR\n", "from diffdrr.data import read, transform_hu_to_density\n", - "\n", - "from diffdrr.pose import convert\n", - "from diffdrr.visualization import drr_to_mesh, img_to_mesh\n", - "import pyvista\n", - "\n", - "from tqdm import tqdm\n", - "\n", "from src.model import TACEnet\n", - "from monai.losses import DiceCELoss\n", "from timeit import default_timer as timer\n", "import numpy as np\n", "import torchvision.transforms as tf\n", - "from torchvision import transforms\n", "\n", "# Set the device\n", "device = torch.device(\"cuda:0\" if torch.cuda.is_available() else \"cpu\")\n", diff --git a/Demo-notebooks/Training.ipynb b/Demo-notebooks/Training.ipynb index f7c300e..cbcd47f 100644 --- a/Demo-notebooks/Training.ipynb +++ b/Demo-notebooks/Training.ipynb @@ -33,8 +33,6 @@ "source": [ "# Import libraries\n", "import sys\n", - "import random\n", - "import numpy as np\n", "import torch\n", "import torchio as tio\n", "\n", @@ -43,31 +41,10 @@ "from src.preprocessing import get_transforms, get_datasets, get_dataloaders, add_vessel_contrast\n", "# from src.config import config\n", "from src.drr import create_drr\n", - "from src.vizualization import plot_results, plot_drr_enhancement\n", + "from src.vizualization import plot_results\n", "import src.training\n", - "\n", - "import torch\n", - "import matplotlib.pyplot as plt\n", - "from diffdrr.visualization import plot_drr, plot_mask\n", - "\n", - "import torch\n", - "import matplotlib.pyplot as plt\n", - "\n", - "import matplotlib.pyplot as plt\n", - "\n", - "from diffdrr.drr import DRR\n", "from diffdrr.data import read, transform_hu_to_density\n", - "\n", - "from diffdrr.pose import convert\n", - "from diffdrr.visualization import drr_to_mesh, img_to_mesh\n", - "import pyvista\n", - "\n", - "from tqdm import tqdm\n", - "\n", "from src.model import TACEnet\n", - "from monai.losses import DiceCELoss\n", - "\n", - "from torchvision import transforms\n", "\n", "# Set the device\n", "device = torch.device(\"cuda:0\" if torch.cuda.is_available() else \"cpu\")\n", diff --git a/Demo-notebooks/demo.ipynb b/Demo-notebooks/demo.ipynb index 6979b20..6e8a9c8 100644 --- a/Demo-notebooks/demo.ipynb +++ b/Demo-notebooks/demo.ipynb @@ -32,7 +32,7 @@ } ], "source": [ - "demo.demonstration(rotation = 35, ef = 0.6, deformation=False)" + "demo.demonstration(rotation = 35, ef = 0.6, deformation=False, initial_contrast=4000, device=device)" ] } ],