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environment.yaml
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name: cell_classification
channels:
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- ca-certificates=2022.9.24=ha878542_0
- cairo=1.16.0=h6cf1ce9_1008
- expat=2.5.0=h27087fc_0
- fontconfig=2.14.1=hc2a2eb6_0
- freetype=2.12.1=hca18f0e_0
- gdk-pixbuf=2.42.6=h04a7f16_0
- gettext=0.21.1=h27087fc_0
- glib=2.68.4=h9c3ff4c_0
- glib-tools=2.68.4=h9c3ff4c_0
- icu=68.2=h9c3ff4c_0
- jpeg=9e=h166bdaf_2
- ld_impl_linux-64=2.39=hc81fddc_0
- lerc=4.0.0=h27087fc_0
- libdeflate=1.14=h166bdaf_0
- libffi=3.3=h58526e2_2
- libgcc-ng=12.2.0=h65d4601_19
- libglib=2.68.4=h3e27bee_0
- libgomp=12.2.0=h65d4601_19
- libiconv=1.17=h166bdaf_0
- libpng=1.6.38=h753d276_0
- libsqlite=3.39.4=h753d276_0
- libstdcxx-ng=12.2.0=h46fd767_19
- libtiff=4.4.0=h55922b4_4
- libuuid=2.32.1=h7f98852_1000
- libwebp-base=1.2.4=h166bdaf_0
- libxcb=1.13=h7f98852_1004
- libxml2=2.9.12=h72842e0_0
- libzlib=1.2.13=h166bdaf_4
- ncurses=6.3=h27087fc_1
- openjpeg=2.5.0=h7d73246_1
- openslide=3.4.1=h978ee9a_4
- openssl=1.1.1s=h166bdaf_0
- pcre=8.45=h9c3ff4c_0
- pip=20.3.1=pyhd8ed1ab_0
- pixman=0.40.0=h36c2ea0_0
- pthread-stubs=0.4=h36c2ea0_1001
- python=3.6.12=hffdb5ce_0_cpython
- python_abi=3.6=2_cp36m
- readline=8.1.2=h0f457ee_0
- setuptools=58.0.4=py36h5fab9bb_2
- sqlite=3.39.4=h4ff8645_0
- tk=8.6.12=h27826a3_0
- wheel=0.37.1=pyhd8ed1ab_0
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.7.2=h7f98852_0
- xorg-libxau=1.0.9=h7f98852_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h7f98852_1
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h7f98852_1002
- xorg-xproto=7.0.31=h7f98852_1007
- xz=5.2.6=h166bdaf_0
- zlib=1.2.13=h166bdaf_4
- zstd=1.5.2=h6239696_4
- pip:
- absl-py==1.3.0
- cachetools==4.2.4
- certifi==2022.9.24
- charset-normalizer==2.0.12
- cycler==0.11.0
- dataclasses==0.8
- decorator==4.4.2
- docopt==0.6.2
- future==0.18.2
- google-auth==1.35.0
- google-auth-oauthlib==0.4.6
- grpcio==1.48.2
- idna==3.4
- imageio==2.9.0
- imgaug==0.4.0
- importlib-metadata==4.8.3
- joblib==1.1.1
- kiwisolver==1.3.1
- markdown==3.3.7
- matplotlib==3.3.0
- networkx==2.5.1
- numpy==1.19.1
- oauthlib==3.2.2
- opencv-python==4.3.0.36
- openslide-python==1.1.2
- pandas==1.1.0
- pillow==7.2.0
- protobuf==3.19.6
- psutil==5.7.3
- pyasn1==0.4.8
- pyasn1-modules==0.2.8
- pyparsing==3.0.9
- python-dateutil==2.8.2
- pytz==2022.6
- pywavelets==1.1.1
- pyyaml==6.0
- requests==2.27.1
- requests-oauthlib==1.3.1
- rsa==4.9
- ruamel-yaml==0.17.21
- ruamel-yaml-clib==0.2.7
- scikit-image==0.17.2
- scikit-learn==0.23.1
- scipy==1.5.2
- shapely==1.8.5.post1
- tensorboard==2.3.0
- tensorboard-plugin-wit==1.8.1
- tensorboardx==2.1
- termcolor==1.1.0
- threadpoolctl==3.1.0
- tifffile==2020.9.3
- torch==1.10.1+cu102
- torchaudio==0.10.1+cu102
- torchvision==0.11.2+cu102
- tqdm==4.48.0
- typing-extensions==4.1.1
- urllib3==1.26.12
- werkzeug==2.0.3