diff --git a/m3/README.md b/m3/README.md index 5da048d..bd509b6 100644 --- a/m3/README.md +++ b/m3/README.md @@ -12,7 +12,7 @@ Reload your Studel Web page, you should see a new RStudio in the sidebar as an o eg, run: ```bash mkdir -p ~/.strudel2/apps.d -curl https://raw.githubusercontent.com/MonashBioinformaticsPlatform/rocker-ultra/main/m3/apps.rstudio.yaml >~/.strudel2/apps.d/apps.rstudio.yaml +curl https://raw.githubusercontent.com/MonashBioinformaticsPlatform/rocker-ultra/main/m3/rocker-seurat_4.4.0-5.0.3.strudel.yaml >~/.strudel2/apps.d/rocker-seurat_4.4.0-5.0.3.strudel.yaml ``` _The example apps.rstudio.yaml uses the `IMAGE` environment variable to pull the container image from an https:// URL - this is because I was finding the regular `singularity exec` / `pull` method unreliable on the cluster. This might have been a temporary issue._ @@ -56,4 +56,4 @@ Host m3a* m3b* m3c* m3d* m3e* m3f* m3g* m3h* m3i* m3j* LocalForward 8787 127.0.0.1:8787 ``` -Then just `ssh -i ~/.ssh/m3 username@m3a002` to the compute node from your laptop, and open https://localhost:8787 in your browser. \ No newline at end of file +Then just `ssh -i ~/.ssh/m3 username@m3a002` to the compute node from your laptop, and open https://localhost:8787 in your browser.