diff --git a/topics/rnaseq/lab_rnaseq.qmd b/topics/rnaseq/lab_rnaseq.qmd index 41795d2f7..6b4ad8372 100644 --- a/topics/rnaseq/lab_rnaseq.qmd +++ b/topics/rnaseq/lab_rnaseq.qmd @@ -973,7 +973,20 @@ The results are saved as tables in the directory **funannot_results**. There are {{< fa clipboard-list >}} Take a quick look at some of these files. ```{sh,eval=FALSE,chunk.title=TRUE} -head go_down.txt +head go_up.txt +``` + +``` +category over_represented_pvalue under_represented_pvalue numDEInCat numInCat term ontology +GO:0030016 2.23312435908185e-45 1 78 176 myofibril CC +GO:0061061 5.40265910772947e-45 1 135 543 muscle structure development BP +GO:0043292 1.59611882901076e-44 1 80 189 contractile fiber CC +GO:0030017 3.08095203872545e-43 1 72 157 sarcomere CC +GO:0044449 2.27198318958789e-41 1 73 170 contractile fiber part CC +GO:0031674 3.81511780088805e-32 1 53 117 I band CC +GO:0003012 7.14173605862631e-32 1 84 301 muscle system process BP +GO:0007517 9.77789997472468e-32 1 88 329 muscle organ development BP +GO:0014706 1.99267634186987e-31 1 90 349 striated muscle tissue development BP ``` The columns of the results tables are: