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v1.2.0: Reworked user IO for more user-control and to be OS independent
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@NickJD NickJD released this 19 Dec 07:08
· 10 commits to master since this release
v1.2.0
3459390
  • Finalised overhaul of user IO to accommodate user requests and become OS independent for StORF-Reporter.
    • Fixed some issues with StORF-Reporter running on a directory of matched Prokka/Bakta gff/fna files.
    • Added option "-af" to allow Prokka/Bakta directory names to differ from internal filename prefixes.
    • Minor changes to parameter handling to ensure "-sout" is called when "-aa" is selected.
    • Feature_Types parameter "-gene_ident Prokka" will select features present in Prokka annotations.

Thanks to @Dx-wmc (#2 (comment)) for suggesting some changes to how StORF-Reporter handles IO.

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