Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Missing dependency 'survminer' on ShinyDeploy server #122

Closed
keesvanbochove opened this issue Jul 20, 2021 · 3 comments
Closed

Missing dependency 'survminer' on ShinyDeploy server #122

keesvanbochove opened this issue Jul 20, 2021 · 3 comments

Comments

@keesvanbochove
Copy link
Contributor

@schuemie @leeevans this Shiny App has a dependency on package 'survminer', which currently isn't installed on the OhdsiShiny server (see https://data.ohdsi.org/PioneerWatchfulWaiting/ > Time to Event tab). What would be the right way to declare this?

Originally posted by @keesvanbochove in #121 (comment)

@keesvanbochove keesvanbochove changed the title Missing dependency 'survminer' on OhdsiDeploy server Missing dependency 'survminer' on ShinyDeploy server Jul 20, 2021
@leeevans
Copy link
Contributor

@keesvanbochove I will install the latest version of the 'survminer' R package on the OHdsiShiny server.

@keesvanbochove
Copy link
Contributor Author

Thanks @leeevans! We are one step closer now, but there also seems to be a dependency on a newer version of Rcpp. When opening the 'Time to Event' tab on https://data.ohdsi.org/PioneerWatchfulWaiting, it shows an error message to that effect (I can't copy it because the website doesn't seem to load right now).

@leeevans
Copy link
Contributor

@keesvanbochove - the shiny server has now been upgraded to use rocker/shiny:4.1.0 and the Time to Event tab is working so I am closing this issue.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants