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bwtsw missed param in Step 9 #9

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ulises1229 opened this issue Sep 23, 2018 · 1 comment
Open

bwtsw missed param in Step 9 #9

ulises1229 opened this issue Sep 23, 2018 · 1 comment

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@ulises1229
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Hi there,

I realized that there is a bwtsw param missed during Step 9 in command bwa index -a microbial_all_cds.fasta

I got the following error [bwa_index] unknown algorithm: 'microbial_all_cds.fasta'.

I tried bwa index -a bwtsw microbial_all_cds.fasta and it worked

Best,

@ulises1229 ulises1229 changed the title bwtsw param missed in Step 9 bwtsw missed param in Step 9 Sep 26, 2018
@Felix-Matheri
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@ulises1229 perhaps you could share how you resolved this. Thanks

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