From 7577661aa52233b9c4b8626552d249730d765324 Mon Sep 17 00:00:00 2001 From: Peer Herholz Date: Wed, 21 Feb 2024 11:11:30 +0100 Subject: [PATCH] Add specific pybids version to container --- generate_images.sh | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/generate_images.sh b/generate_images.sh index b83a928..ac35de4 100644 --- a/generate_images.sh +++ b/generate_images.sh @@ -14,7 +14,7 @@ generate_docker() { --fsl version=6.0.1 method=binaries \ --miniconda \ conda_install="python=3.10 numpy nipype nibabel pandas datalad" \ - pip_install='tensorflow scikit-image pydeface==2.0.2 nobrainer==0.4.0 quickshear==1.2.0 datalad-osf' \ + pip_install='tensorflow scikit-image pydeface==2.0.2 nobrainer==0.4.0 quickshear==1.2.0 datalad-osf pybids==0.16.4' \ create_env='bidsonym' \ activate=true \ --run-bash "git config --global user.email "bidsonym@example.com" && git config --global user.name "BIDSonym"" \