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VcfFields.md

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VcfFields

Properties

Name Type Description Notes
chrom String The RefSeq/Genbank Accession.Version for the reference sequence. Despite the name (taken from the VCF standard) this does not need to be a chromosome.
pos Integer The 1-based position of the first nucleotide in the reference allele string on its sequence
ref String The reference allele, with padding nucleotide when required
alt String Alternate allele, with padding nucleotide when required
warnings Warnings [optional]