diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index a6f73e321..17555c58d 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -9,7 +9,7 @@ ci: repos: - repo: https://github.com/pre-commit/pre-commit-hooks - rev: v4.6.0 + rev: v5.0.0 hooks: - id: end-of-file-fixer - id: trailing-whitespace @@ -23,7 +23,7 @@ repos: - id: detect-private-key - repo: https://github.com/psf/black - rev: "24.4.2" + rev: "24.10.0" hooks: - id: black - id: black-jupyter diff --git a/generation/README.md b/generation/README.md index df50ed899..6c4fe96aa 100644 --- a/generation/README.md +++ b/generation/README.md @@ -43,7 +43,7 @@ Example shows the use cases of using MONAI to evaluate the performance of a gene ## [Training a 2D VQ-VAE + Autoregressive Transformers](./2d_vqvae_transformer/2d_vqvae_transformer_tutorial.ipynb): Example shows how to train a Vector-Quantized Variation Autoencoder + Transformers on the MedNIST dataset. -## Training VQ-VAEs and VQ-GANs: [2D VAE](./2d_vqvae/2d_vqvae_tutorial.ipynb), [3D VAE](./3d_vqvae/3d_vqvae_tutorial.ipynb) and [2D GAN](./3d_autoencoderkl/2d_vqgan_tutorial.ipynb) +## Training VQ-VAEs and VQ-GANs: [2D VAE](./2d_vqvae/2d_vqvae_tutorial.ipynb), [3D VAE](./3d_vqvae/3d_vqvae_tutorial.ipynb) and [2D GAN](./2d_vqgan/2d_vqgan_tutorial.ipynb) Examples show how to train Vector Quantized Variation Autoencoder on [2D](./2d_vqvae/2d_vqvae_tutorial.ipynb) and [3D](./3d_vqvae/3d_vqvae_tutorial.ipynb), and how to use the PatchDiscriminator class to train a [VQ-GAN](./2d_vqgan/2d_vqgan_tutorial.ipynb) and improve the quality of the generated images. ## [Training a 2D Denoising Diffusion Probabilistic Model](./2d_ddpm/2d_ddpm_tutorial.ipynb): diff --git a/pathology/tumor_detection/ignite/profiling_camelyon_pipeline.ipynb b/pathology/tumor_detection/ignite/profiling_camelyon_pipeline.ipynb index 33b826838..25ec13eb8 100644 --- a/pathology/tumor_detection/ignite/profiling_camelyon_pipeline.ipynb +++ b/pathology/tumor_detection/ignite/profiling_camelyon_pipeline.ipynb @@ -159,7 +159,7 @@ "!nsys profile \\\n", " --trace nvtx,osrt,cudnn,cuda, \\\n", " --delay 5 \\\n", - " --duration 10 \\\n", + " --duration 20 \\\n", " --show-output true \\\n", " --force-overwrite true \\\n", " --output profile_report.nsys-rep \\\n",