Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add documentation and/or functions to export data from R for reading by Cytoscape #34

Open
dataMaster-Kris opened this issue Nov 17, 2020 · 0 comments

Comments

@dataMaster-Kris
Copy link

Hi,

scNetViz allows folks to load their own normalized data and categories for analysis.

  1. It will be nice to add documentation (here?) on how to export R objects in the format required by Cytoscape. I'll provide few lines of R code to add to the documentation.

To be added

  1. Some folks might like it if there were options to import standard R and Python objects commonly used in single-cell community, e.g., SeuratObject, SingleCellExperiment, SummarizedExperiment, and AnnData.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant