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Kele Kent edited this page Feb 23, 2024 · 25 revisions

Raw file uploader

Raw file uploader is an upload tool to be used with Proteomics Data Manager for uploading raw files to the database with metadata about the analysis. The program is built on C# with .net 4.5.1 (same framework as Thermo Orbitrap Tribride) for the Windows platform. page_1_filled

Download

You can download the .zip file containing the Raw File Uploader from GitHub or click Download for it to download directly from your browser. With the .zip folder, follow these steps

  • open the .zip
  • click and run the setup application
  • if you are restricted by security, click more info then "Run Anyways"
  • Once complete the Raw File Uploader is installed

If you are stuck or struggling the steps are laid out with pictures Here

How to use

Before you can upload files to MS Connect you need to set up a pathway for the Raw file uploader to reach MS Connect. For this, you'll need the server IP address for MS Connect and your Username and Password. image

If MS Connect is running on your current device then you can use one of these Addresses

http://127.0.0.1/files/api/ or http://localhoast/files/api/

If MS Connect is running on a different device replace "IP_Address_Here" with the MS Connect IP Address

http://IP_Address_Here/files/api/

Next, insert your Username and Password and click "Verify Account". Now you should be able to upload files to MS Connect.

Configure Settings

Before you upload it is good practice to record important information for your colleagues and your future self. These settings also tell the Uploader and MS Connect how to process this information.

image

Single file/folder

First, browse or type a filename (or files separated by '.'), then click 'manual upload files/folder' image

Multiple files

First, browse or type a folder location (or add folders separated by '.'), then click 'manual upload files/folder' image

Whole folder (or subfolders if MS data is stored in folders)

First, browse or type a folder location (or files separated by '.'), then click 'manual upload files/folder'. image

Other Help