From 0fbb8d6c1f1ebdc76ff0d59c23f32c092696f94e Mon Sep 17 00:00:00 2001 From: Rasmus Oersoe Date: Sat, 20 Jul 2024 11:07:22 +0200 Subject: [PATCH 01/12] numpy >= 1.23 --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index 0f7480956..13479645c 100644 --- a/setup.py +++ b/setup.py @@ -15,7 +15,7 @@ "configupdater", "dill>=0.3", "matplotlib>=3.5", - "numpy>=1.21", + "numpy>=1.23", "pandas>=1.3", "pyarrow", "pydantic", From a70bfa2f560ae9e7d82319fa1e021d7371f2ecbd Mon Sep 17 00:00:00 2001 From: Rasmus Oersoe Date: Sat, 20 Jul 2024 11:23:48 +0200 Subject: [PATCH 02/12] numpy >= 1.24 --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index 13479645c..7b7bef41f 100644 --- a/setup.py +++ b/setup.py @@ -15,7 +15,7 @@ "configupdater", "dill>=0.3", "matplotlib>=3.5", - "numpy>=1.23", + "numpy>=1.24", "pandas>=1.3", "pyarrow", "pydantic", From 3f408b0ac20787d7dbc5aeacd891f5fc2d2b546d Mon Sep 17 00:00:00 2001 From: Rasmus Oersoe Date: Sat, 20 Jul 2024 11:34:19 +0200 Subject: [PATCH 03/12] numpy>= 1.22, torch_geometric<2.5 --- setup.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/setup.py b/setup.py index 7b7bef41f..325aa7aac 100644 --- a/setup.py +++ b/setup.py @@ -15,7 +15,7 @@ "configupdater", "dill>=0.3", "matplotlib>=3.5", - "numpy>=1.24", + "numpy>=1.22", "pandas>=1.3", "pyarrow", "pydantic", @@ -54,7 +54,7 @@ "torch-cluster>=1.6", "torch-scatter>=2.0", "torch-sparse>=0.6", - "torch-geometric>=2.3", + "torch-geometric>=2.3,<2.5", "pytorch-lightning>=2.0", ], } From 7746db129c204ac4db4e1a1bbb8597b22650a168 Mon Sep 17 00:00:00 2001 From: Rasmus Oersoe Date: Sat, 20 Jul 2024 11:40:45 +0200 Subject: [PATCH 04/12] torch_geometric <2.4 --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index 325aa7aac..129f115fb 100644 --- a/setup.py +++ b/setup.py @@ -54,7 +54,7 @@ "torch-cluster>=1.6", "torch-scatter>=2.0", "torch-sparse>=0.6", - "torch-geometric>=2.3,<2.5", + "torch-geometric>=2.3,<2.4", "pytorch-lightning>=2.0", ], } From 6ace7980ee3fcac077903239cec23f74c6c89315 Mon Sep 17 00:00:00 2001 From: Rasmus Oersoe Date: Sat, 20 Jul 2024 11:51:31 +0200 Subject: [PATCH 05/12] numpy >= 1.24 --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index 129f115fb..90a649f50 100644 --- a/setup.py +++ b/setup.py @@ -15,7 +15,7 @@ "configupdater", "dill>=0.3", "matplotlib>=3.5", - "numpy>=1.22", + "numpy>=1.24", "pandas>=1.3", "pyarrow", "pydantic", From 06d3d5dc9126530c129797306d45bfcd861379b9 Mon Sep 17 00:00:00 2001 From: Rasmus Oersoe Date: Sat, 20 Jul 2024 11:52:18 +0200 Subject: [PATCH 06/12] pip show numpy --- .github/workflows/build.yml | 1 + 1 file changed, 1 insertion(+) diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml index 8f2762e77..50cf3c879 100644 --- a/.github/workflows/build.yml +++ b/.github/workflows/build.yml @@ -109,6 +109,7 @@ jobs: pip show torch-cluster pip show torch-sparse pip show torch-scatter + pip show numpy - name: Run unit tests and generate coverage report run: | set -o pipefail # To propagate exit code from pytest From 6d78c097a931c2a5ce9cf445d3a5f689cf8dc5a2 Mon Sep 17 00:00:00 2001 From: Rasmus Oersoe Date: Sat, 20 Jul 2024 12:31:12 +0200 Subject: [PATCH 07/12] ubuntu-latest -> ubuntu-20.04 --- .github/workflows/build.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml index 50cf3c879..4d8dcee4f 100644 --- a/.github/workflows/build.yml +++ b/.github/workflows/build.yml @@ -84,7 +84,7 @@ jobs: build-matrix: name: Unit tests - Python versions - runs-on: ubuntu-latest + runs-on: ubuntu-20.04 strategy: matrix: python-version: [3.8, 3.9, '3.10', '3.11'] From bbe27944b236c002d94ebecb0a781d48f9999c44 Mon Sep 17 00:00:00 2001 From: Rasmus Oersoe Date: Sat, 20 Jul 2024 12:51:55 +0200 Subject: [PATCH 08/12] numpy=1.24 --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index 90a649f50..d7afec36e 100644 --- a/setup.py +++ b/setup.py @@ -15,7 +15,7 @@ "configupdater", "dill>=0.3", "matplotlib>=3.5", - "numpy>=1.24", + "numpy=1.24", "pandas>=1.3", "pyarrow", "pydantic", From 7ecade3e59458af7739ffa693b1643465ebef25c Mon Sep 17 00:00:00 2001 From: Rasmus Oersoe Date: Sat, 20 Jul 2024 12:55:15 +0200 Subject: [PATCH 09/12] numpy==1.24 --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index d7afec36e..d8ea454d7 100644 --- a/setup.py +++ b/setup.py @@ -15,7 +15,7 @@ "configupdater", "dill>=0.3", "matplotlib>=3.5", - "numpy=1.24", + "numpy==1.24", "pandas>=1.3", "pyarrow", "pydantic", From 505b4e0ef98bbe1c020afdbee8393c7151887179 Mon Sep 17 00:00:00 2001 From: Rasmus Oersoe Date: Sat, 20 Jul 2024 13:02:51 +0200 Subject: [PATCH 10/12] ubuntu-20.04 -> latest --- .github/workflows/build.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml index 4d8dcee4f..50cf3c879 100644 --- a/.github/workflows/build.yml +++ b/.github/workflows/build.yml @@ -84,7 +84,7 @@ jobs: build-matrix: name: Unit tests - Python versions - runs-on: ubuntu-20.04 + runs-on: ubuntu-latest strategy: matrix: python-version: [3.8, 3.9, '3.10', '3.11'] From 1d2cb6b106de31e89cfeb2c6d665431eb010cee7 Mon Sep 17 00:00:00 2001 From: Rasmus Oersoe Date: Sat, 20 Jul 2024 13:18:49 +0200 Subject: [PATCH 11/12] torch-geometric>=2.3,<2.4 -> torch-geometric>=2.3 --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index d8ea454d7..e10ffd0ba 100644 --- a/setup.py +++ b/setup.py @@ -54,7 +54,7 @@ "torch-cluster>=1.6", "torch-scatter>=2.0", "torch-sparse>=0.6", - "torch-geometric>=2.3,<2.4", + "torch-geometric>=2.3", "pytorch-lightning>=2.0", ], } From b0d24b855ab0624446693c3b520aac3042684672 Mon Sep 17 00:00:00 2001 From: Rasmus Oersoe Date: Sat, 20 Jul 2024 13:36:14 +0200 Subject: [PATCH 12/12] numpy==1.24 -> numpy>=1.22,<2.0 --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index e10ffd0ba..fa2b71ad2 100644 --- a/setup.py +++ b/setup.py @@ -15,7 +15,7 @@ "configupdater", "dill>=0.3", "matplotlib>=3.5", - "numpy==1.24", + "numpy>=1.22,<2.0", "pandas>=1.3", "pyarrow", "pydantic",