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Cannot open Neuralynx data with Pegasus #2411

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Antho2422 opened this issue Jan 17, 2024 · 4 comments
Closed

Cannot open Neuralynx data with Pegasus #2411

Antho2422 opened this issue Jan 17, 2024 · 4 comments
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NEO Problem related to NEO IO

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@Antho2422
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Hi all,

I had the issue for a quite long time ago now but I get no answers from Neo side so I was wondering if I can maybe get some help from here maybe :)

I think in the newest versions of Pegasus the import of Neuralynx data is impossible due to a wrong datetimeformat. Here is the link to my issue I posted on Neo's github : NeuralEnsemble/python-neo#1352 (comment)

Any help would be appreciated !

Cheers,
Anthony

@zm711 zm711 added the NEO Problem related to NEO IO label Jan 17, 2024
@zm711
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zm711 commented Jan 17, 2024

I responded on the Neo side. I could maybe play around with it over there, but I don't have any data so I would definitely need to be provided some test files if I were going to work on it. And I'm not sure when I would have time to do it for sure.

@Antho2422
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Thanks a lot I would be happy to help if needed on this part, I could give a try

@zm711
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zm711 commented Mar 8, 2024

With Sam's recent patches is this working now @Antho2422? I assume you'll be at his workshop coming up so if you have more questions you can discuss there, but is this issue fixed now?

@samuelgarcia
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This is closed by this #2550
In spiekinterface.read_neuralynx() we set the strict_gap_mode=False so normaly this is OK.
I close then

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