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vtu_clip.sh
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#!/bin/bash
# python prelim_analysis.py --suff p1 --vtk --vtu --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_p1.vtp --results Artificial/RCA/ASI2/p1/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
# python prelim_analysis.py --suff p2 --vtk --vtu --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_p2.vtp --results Artificial/RCA/ASI2/p2/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
# python prelim_analysis.py --suff p3 --vtk --vtu --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_p3.vtp --results Artificial/RCA/ASI2/p3/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
# python prelim_analysis.py --suff p4 --vtk --vtu --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_p4.vtp --results Artificial/RCA/ASI2/p4/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
# python prelim_analysis.py --suff p5 --vtk --vtu --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_p5.vtp --results Artificial/RCA/ASI2/p5/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
# python prelim_analysis.py --suff p1 --vtk --vtu --source AneurysmGeneration/models/SKD0050/SKD0050_baseline_model_modified_p1.vtp --results Artificial/RCA/ASI4/p1/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI4/ --suff p1 --shape ASI4
# python prelim_analysis.py --suff p2 --vtk --vtu --source AneurysmGeneration/models/SKD0050/SKD0050_baseline_model_modified_p2.vtp --results Artificial/RCA/ASI4/p2/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI4/ --suff p2 --shape ASI4
# python prelim_analysis.py --suff p3 --vtk --vtu --source AneurysmGeneration/models/SKD0050/SKD0050_baseline_model_modified_p3.vtp --results Artificial/RCA/ASI4/p3/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI4/ --suff p3 --shape ASI4
# python prelim_analysis.py --suff p4 --vtk --vtu --source AneurysmGeneration/models/SKD0050/SKD0050_baseline_model_modified_p4.vtp --results Artificial/RCA/ASI4/p4/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI4/ --suff p4 --shape ASI4
# python prelim_analysis.py --suff p5 --vtk --vtu --source AneurysmGeneration/models/SKD0050/SKD0050_baseline_model_modified_p5.vtp --results Artificial/RCA/ASI4/p5/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI4/ --suff p5 --shape ASI4
# python prelim_analysis.py --suff p1 --vtk --vtu --source AneurysmGeneration/models/SKD0050/right_asi_6/SKD0050_baseline_model_modified_p1.vtp --results Artificial/RCA/ASI6/p1/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI6/ --suff p1 --shape ASI6
# python prelim_analysis.py --suff p2 --vtk --vtu --source AneurysmGeneration/models/SKD0050/right_asi_6/SKD0050_baseline_model_modified_p2.vtp --results Artificial/RCA/ASI6/p2/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI6/ --suff p2 --shape ASI6
# python prelim_analysis.py --suff p3 --vtk --vtu --source AneurysmGeneration/models/SKD0050/right_asi_6/SKD0050_baseline_model_modified_p3.vtp --results Artificial/RCA/ASI6/p3/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI6/ --suff p3 --shape ASI6
# python prelim_analysis.py --suff p4 --vtk --vtu --source AneurysmGeneration/models/SKD0050/right_asi_6/SKD0050_baseline_model_modified_p4.vtp --results Artificial/RCA/ASI6/p4/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI6/ --suff p4 --shape ASI6
# python prelim_analysis.py --suff p5 --vtk --vtu --source AneurysmGeneration/models/SKD0050/right_asi_6/SKD0050_baseline_model_modified_p5.vtp --results Artificial/RCA/ASI6/p5/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI6/ --suff p5 --shape ASI6
python prelim_analysis.py --suff m1 --vtk --vtu --dry --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_m1.vtp --results Artificial/RCA/ASI2/m1/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
python prelim_analysis.py --suff m2 --vtk --vtu --dry --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_m2.vtp --results Artificial/RCA/ASI2/m2/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
python prelim_analysis.py --suff m3 --vtk --vtu --dry --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_m3.vtp --results Artificial/RCA/ASI2/m3/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
python prelim_analysis.py --suff m4 --vtk --vtu --dry --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_m4.vtp --results Artificial/RCA/ASI2/m4/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
python prelim_analysis.py --suff m5 --vtk --vtu --dry --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_m5.vtp --results Artificial/RCA/ASI2/m5/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
# python prelim_analysis.py --suff d1 --vtk --vtu --dry --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_d1.vtp --results Artificial/RCA/ASI2/d1/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
# # python prelim_analysis.py --suff d2 --vtk --vtu --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_d2.vtp --results Artificial/RCA/ASI2/d2/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
# python prelim_analysis.py --suff d3 --vtk --vtu --dry --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_d3.vtp --results Artificial/RCA/ASI2/d3/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
# python prelim_analysis.py --suff d4 --vtk --vtu --dry --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_d4.vtp --results Artificial/RCA/ASI2/d4/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
# # python prelim_analysis.py --suff d5 --vtk --vtu --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_d5.vtp --results Artificial/RCA/ASI2/d5/all_results.vtp --mapping --post --clip --outdir clipped_results_short/RCA/ASI2/ --shape ASI2
# extract baseline regions
# python prelim_analysis.py --suff p3 --vtk --baseline --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_p3.vtp --results Artificial/RCA/ASI2/p3/all_results.vtp --mapping --post --clip --outdir clipped_results_short/baseline/ --suff p3 --shape ASI2
# python prelim_analysis.py --suff p3 --vtk --baseline --source AneurysmGeneration/models/SKD0050/SKD0050_baseline_model_modified_p3.vtp --results Artificial/RCA/ASI4/p3/all_results.vtp --mapping --post --clip --outdir clipped_results_short/baseline/ --suff p3 --shape ASI4
# python prelim_analysis.py --suff p3 --vtk --baseline --source AneurysmGeneration/models/SKD0050/right_asi_6/SKD0050_baseline_model_modified_p3.vtp --results Artificial/RCA/ASI6/p3/all_results.vtp --mapping --post --clip --outdir clipped_results_short/baseline/ --suff p3 --shape ASI6
# debugging the labeling routines
# python prelim_analysis.py --suff m1 --vtk --vtu --dry --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_m1.vtp --results Artificial/RCA/ASI2/m1/all_results.vtp --mapping --post --clip --suff m1 --shape ASI2
# debugging the vtu clipping for distal aneurysms?
# python prelim_analysis.py --suff d5 --vtk --vtu --source AneurysmGeneration/models/SKD0050/right_asi_2/SKD0050_baseline_model_modified_d5.vtp --results Artificial/RCA/ASI2/d5/all_results.vtp --mapping --post --clip --outdir test/ --suff d5 --shape ASI2