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OMERO_EXPORT_README.md

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OMERO User Scripts

Installation

  1. Change into the scripts location of your OMERO installation

     cd OMERO_DIST/lib/scripts

  2. Create a new directory and download the script file

     mkdir omero_export && cd omero_export
 wget https://github.com/SynthSys/omero-toolkit/blob/master/pyOmeroUpload/src/omero_data_transfer/Export_to_other_omero.py

  3. Update your list of installed scripts by examining the list of scripts in OMERO.insight or OMERO.web, or by running the following command

     path/to/bin/omero script list

Upgrading

  1. Change into the repository location created during installation

     cd OMERO_DIST/lib/scripts/omero_export

  2. Update the repository to the latest version

     wget https://github.com/SynthSys/omero-toolkit/blob/master/pyOmeroUpload/src/omero_data_transfer/Export_to_other_omero.py

  3. Update your list of installed scripts by examining the list of scripts in OMERO.insight or OMERO.web, or by running the following command

     path/to/bin/omero script list

Testing your script

  1. List the current scripts in the system

     path/to/bin/omero script list

  2. List the parameters

     path/to/bin/omero script params SCRIPT_ID

  3. Launch the script

     path/to/bin/omero script launch SCRIPT_ID

  4. See the developer documentation for more information on testing and modifying your scripts.

Legal

See LICENSE

About

This section provides machine-readable information about your scripts. It will be used to help generate a landing page and links for your work. Please modify all values on each branch to describe your scripts.

Repository name

Base OMERO User Scripts repository

Minimum version

4.4

Maximum version

5.0

Owner(s)

The OME Team

Institution

Open Microscopy Environment

URL

http://openmicroscopy.org/info/scripts

Email

[email protected]

Description

Example script repository to be cloned, modified, and extended. This text may be used on OME resources to explain your scripts.