diff --git a/code/masterScriptWormGEM.m b/code/masterScriptWormGEM.m index 131a0ad..25ede62 100644 --- a/code/masterScriptWormGEM.m +++ b/code/masterScriptWormGEM.m @@ -27,7 +27,7 @@ %% Generate Worm-GEM [wormGEM, speciesSpecNetwork, gapfillNetwork]=updateAnimalGEM(... - wormOrthologPairs,rxnsToAdd,metsToAdd,'Worm-GEM'); + wormOrthologPairs,rxnsToAdd,metsToAdd,'Worm-GEM','true'); %% Update annotation files diff --git a/model/Worm-GEM.mat b/model/Worm-GEM.mat index 4f27223..bd234ca 100644 Binary files a/model/Worm-GEM.mat and b/model/Worm-GEM.mat differ diff --git a/model/Worm-GEM.xml b/model/Worm-GEM.xml index f91dee0..0d35a2a 100644 --- a/model/Worm-GEM.xml +++ b/model/Worm-GEM.xml @@ -13,10 +13,10 @@ - 2023-08-09T09:42:32Z + 2023-10-01T21:27:08Z - 2023-08-09T09:42:32Z + 2023-10-01T21:27:08Z @@ -1294,23 +1294,6 @@ - - - - - - - - - - - - - - - - - @@ -1467,24 +1450,6 @@ - - - - - - - - - - - - - - - - - - @@ -2005,7 +1970,7 @@ - + @@ -2025,7 +1990,7 @@ - + @@ -2045,7 +2010,7 @@ - + @@ -2415,7 +2380,7 @@ - + @@ -4697,6 +4662,7 @@ + @@ -4704,7 +4670,9 @@ + + @@ -4739,6 +4707,7 @@ + @@ -4746,7 +4715,9 @@ + + @@ -6149,7 +6120,7 @@ - + @@ -8244,6 +8215,7 @@ + @@ -13595,7 +13567,7 @@ - + @@ -13612,7 +13584,7 @@ - + @@ -15037,36 +15009,6 @@ - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -15717,27 +15659,6 @@ - - - - - - - - - - - - - - - - - - - - - @@ -15795,26 +15716,6 @@ - - - - - - - - - - - - - - - - - - - - @@ -18941,27 +18842,6 @@ - - - - - - - - - - - - - - - - - - - - - @@ -18983,27 +18863,6 @@ - - - - - - - - - - - - - - - - - - - - - @@ -19366,22 +19225,6 @@ - - - - - - - - - - - - - - - - @@ -19904,6 +19747,7 @@ + @@ -22110,7 +21954,7 @@ - + @@ -22128,7 +21972,7 @@ - + @@ -22207,7 +22051,7 @@ - + @@ -22226,7 +22070,7 @@ - + @@ -22321,20 +22165,6 @@ - - - - - - - - - - - - - - @@ -22946,6 +22776,8 @@ + + @@ -26603,7 +26435,7 @@ - + @@ -26623,7 +26455,7 @@ - + @@ -29854,7 +29686,7 @@ - + @@ -31150,90 +30982,6 @@ - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -32815,7 +32563,7 @@ - + @@ -36245,6 +35993,21 @@ + + + + + + + + + + + + + + + @@ -36841,12 +36604,14 @@ + + @@ -37073,26 +36838,6 @@ - - - - - - - - - - - - - - - - - - - - @@ -39322,26 +39067,6 @@ - - - - - - - - - - - - - - - - - - - - @@ -45556,6 +45281,7 @@ + @@ -45564,6 +45290,7 @@ + @@ -45628,6 +45355,7 @@ + @@ -46997,8 +46725,10 @@ + + @@ -47327,7 +47057,7 @@ - + @@ -50011,20 +49741,6 @@ - - - - - - - - - - - - - - @@ -55284,7 +55000,7 @@ - + @@ -55302,7 +55018,7 @@ - + @@ -55320,7 +55036,7 @@ - + @@ -56943,8 +56659,8 @@ - - + + @@ -63430,7 +63146,7 @@ - + @@ -63449,7 +63165,7 @@ - + @@ -63468,7 +63184,7 @@ - + @@ -63487,7 +63203,7 @@ - + @@ -63506,7 +63222,7 @@ - + @@ -71198,9 +70914,9 @@ - + - + @@ -71217,9 +70933,9 @@ - + - + @@ -71236,9 +70952,9 @@ - + - + @@ -73383,7 +73099,7 @@ - + @@ -73404,7 +73120,7 @@ - + @@ -73425,10 +73141,10 @@ - + - + @@ -73446,7 +73162,7 @@ - + @@ -74328,7 +74044,7 @@ - + @@ -74345,7 +74061,7 @@ - + @@ -74362,7 +74078,7 @@ - + @@ -74463,7 +74179,7 @@ - + @@ -74483,7 +74199,7 @@ - + @@ -74503,7 +74219,7 @@ - + @@ -74523,7 +74239,7 @@ - + @@ -76566,7 +76282,9 @@ + + @@ -76608,7 +76326,9 @@ + + @@ -77052,45 +76772,6 @@ - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -85428,7 +85109,7 @@ - + @@ -85446,7 +85127,7 @@ - + @@ -89649,22 +89330,6 @@ - - - - - - - - - - - - - - - - @@ -89851,23 +89516,6 @@ - - - - - - - - - - - - - - - - - @@ -90296,7 +89944,7 @@ - + @@ -90734,9 +90382,9 @@ - + - + @@ -90958,9 +90606,9 @@ - + - + @@ -91031,9 +90679,9 @@ - + - + @@ -91323,21 +90971,6 @@ - - - - - - - - - - - - - - - @@ -91675,25 +91308,6 @@ - - - - - - - - - - - - - - - - - - - @@ -91873,25 +91487,6 @@ - - - - - - - - - - - - - - - - - - - @@ -92813,7 +92408,7 @@ - + @@ -93045,25 +92640,6 @@ - - - - - - - - - - - - - - - - - - - @@ -93618,7 +93194,7 @@ - + @@ -93741,44 +93317,6 @@ - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -93914,25 +93452,6 @@ - - - - - - - - - - - - - - - - - - - @@ -94099,6 +93618,7 @@ + @@ -94402,7 +93922,7 @@ - + @@ -95841,25 +95361,6 @@ - - - - - - - - - - - - - - - - - - - @@ -98088,25 +97589,6 @@ - - - - - - - - - - - - - - - - - - - @@ -98467,19 +97949,6 @@ - - - - - - - - - - - - - @@ -98525,40 +97994,6 @@ - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -99054,25 +98489,6 @@ - - - - - - - - - - - - - - - - - - - @@ -99400,25 +98816,6 @@ - - - - - - - - - - - - - - - - - - - @@ -100496,22 +99893,6 @@ - - - - - - - - - - - - - - - - @@ -101522,22 +100903,6 @@ - - - - - - - - - - - - - - - - @@ -104227,11 +103592,11 @@ - - + + - + @@ -105229,7 +104594,7 @@ - + @@ -108696,23 +108061,6 @@ - - - - - - - - - - - - - - - - - @@ -110418,20 +109766,6 @@ - - - - - - - - - - - - - - @@ -133571,6 +132905,56 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -139424,6 +138808,7 @@

Confidence Level: 0

+

AUTHORS: PMID:10502673;PMID:3597357;PMID:4062874

 @@ -139432,10 +138817,12 @@ + + @@ -140079,7 +139466,7 @@ - + @@ -141718,7 +141105,7 @@ - + @@ -141753,7 +141140,7 @@ - + @@ -143513,12 +142900,12 @@ + - - + @@ -144420,12 +143807,12 @@ + - - + @@ -145129,10 +144516,7 @@ - - - - + @@ -146571,7 +145955,7 @@

Confidence Level: 0

-

AUTHORS: PMID:10542323;PMID:3678231

+

AUTHORS: PMID:10542323;PMID:3678231;PMID:11508704;PMID:5773299

 @@ -146584,6 +145968,7 @@ + @@ -150741,6 +150126,7 @@

Confidence Level: 0

+

AUTHORS: PMID:5553404;PMID:5671058

 @@ -150753,6 +150139,7 @@ + @@ -150769,10 +150156,7 @@ - - - - + @@ -152050,12 +151434,12 @@ + - + - @@ -152405,37 +151789,6 @@ - - - -

Confidence Level: 0

-

AUTHORS: PMID:18506409

- - - - - - - - - - - - - - - - - - - - - - - - - - @@ -153571,13 +152924,13 @@ + - - + @@ -153679,13 +153032,13 @@ + - - + @@ -153755,13 +153108,13 @@ + - - + @@ -154402,6 +153755,7 @@

Confidence Level: 0

+

AUTHORS: PMID:18506409

 @@ -154582,6 +153936,7 @@

Confidence Level: 0

+

AUTHORS: PMID:12855692;PMID:6401712;PMID:6874697;PMID:3597357

 @@ -154590,8 +153945,12 @@ + + + + @@ -154617,6 +153976,7 @@

Confidence Level: 0

+

AUTHORS: PMID:3597357;PMID:9214289

 @@ -154624,10 +153984,13 @@ + + + @@ -154646,6 +154009,7 @@ + @@ -154761,6 +154125,7 @@

Confidence Level: 0

+

AUTHORS: PMID:6401712

 @@ -154769,8 +154134,13 @@ + + + + + @@ -154825,7 +154195,7 @@ - + @@ -154997,14 +154367,14 @@ + - + - @@ -155553,14 +154923,14 @@ + - + - @@ -157413,14 +156783,14 @@ + - + - @@ -157508,13 +156878,13 @@ + - + - @@ -158840,68 +158210,6 @@ - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -158939,8 +158247,8 @@ - + @@ -158986,42 +158294,6 @@ - - - -

Confidence Level: 0

-

AUTHORS: PMID:10502673;PMID:3597357;PMID:4062874

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -159509,10 +158781,16 @@ + + + + + + @@ -159547,10 +158825,16 @@ + + + + + + @@ -160359,46 +159643,11 @@ - - - -

Confidence Level: 0

-

AUTHORS: PMID:3081514

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Confidence Level: 0

+

AUTHORS: PMID:3081514

 @@ -160409,7 +159658,9 @@ + + @@ -165116,9 +164367,11 @@ + + @@ -167213,7 +166466,7 @@ - + @@ -167503,7 +166756,7 @@ - + @@ -167567,12 +166820,12 @@ + - + - @@ -167603,13 +166856,13 @@ + - + - @@ -167639,13 +166892,13 @@ + - + - @@ -167692,43 +166945,6 @@ - - - -

Confidence Level: 0

-

AUTHORS: PMID:12855692;PMID:6401712;PMID:6874697;PMID:3597357

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -167778,7 +166994,7 @@

Confidence Level: 0

-

AUTHORS: PMID:11580916;PMID:8188708

+

AUTHORS: PMID:11580916;PMID:8188708;PMID:8824301

 @@ -167787,9 +167003,12 @@ + + + @@ -167893,79 +167112,6 @@ - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Confidence Level: 0

-

AUTHORS: PMID:3597357;PMID:9214289

- - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -168082,44 +167228,6 @@ - - - -

Confidence Level: 0

-

AUTHORS: PMID:6401712

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -173936,72 +173044,6 @@ - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -175931,74 +174973,6 @@ - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -177094,11 +176068,12 @@ - +

Confidence Level: 0

AUTHORS: PMID:12549038

+

NOTES: Essentials of Medical Biochemistry: With Clinical Cases (2011) page 130, ISBN:978008091688

 @@ -177120,14 +176095,14 @@ - - - - - + + + + + @@ -177502,10 +176477,15 @@ + + + + + @@ -177626,13 +176606,13 @@ + - + - @@ -177662,59 +176642,17 @@ + - + - - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -178360,28 +177298,28 @@ - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + @@ -178698,8 +177636,8 @@ - - + + @@ -183551,7 +182489,7 @@ - +

Confidence Level: 0

@@ -183804,45 +182742,6 @@ - - - -

Confidence Level: 0

-

AUTHORS: PMID:7732023;PMID:16854592;PMID:18455495;PMID:10677481;PMID:16721829;PMID:17126822;PMID:235695;PMID:24055;PMID:6116153;PMID:6116159;PMID:6116163;PMID:6138355;PMID:7732023;PMID:9099716

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -183869,14 +182768,11 @@ - - + - - - + @@ -187653,8 +186549,8 @@ - + @@ -189785,9 +188681,9 @@ - + @@ -189814,9 +188710,9 @@ - + @@ -189957,11 +188853,11 @@ - + - + @@ -191892,7 +190788,7 @@

Confidence Level: 0

-

AUTHORS: PMID:10970790;PMID:10970790

+

AUTHORS: PMID:10970790;PMID:10970790;PMID:10970790

 @@ -191901,7 +190797,9 @@ + + @@ -191970,10 +190868,10 @@ - + - + @@ -192640,7 +191538,7 @@ - + @@ -192950,8 +191848,8 @@ - + @@ -193024,7 +191922,7 @@ - + @@ -193080,11 +191978,11 @@ - + - + @@ -193165,7 +192063,7 @@ - + @@ -193309,12 +192207,12 @@ + - - + @@ -193457,11 +192355,11 @@ - + - + @@ -193503,7 +192401,7 @@ - + @@ -193734,6 +192632,9 @@ + + + @@ -196401,7 +195302,6 @@ - @@ -196424,6 +195324,7 @@ + @@ -196472,7 +195373,6 @@ - @@ -196495,6 +195395,7 @@ + @@ -196542,7 +195443,6 @@ - @@ -196565,6 +195465,7 @@ + @@ -196612,7 +195513,6 @@ - @@ -196635,6 +195535,7 @@ + @@ -196683,7 +195584,6 @@ - @@ -196706,6 +195606,7 @@ + @@ -196754,7 +195655,6 @@ - @@ -196777,6 +195677,7 @@ + @@ -199059,11 +197960,11 @@ - + - + @@ -199273,8 +198174,8 @@ - + @@ -200056,11 +198957,11 @@ - + - + @@ -200270,8 +199171,8 @@ - + @@ -201036,11 +199937,11 @@ - + - + @@ -201250,8 +200151,8 @@ - + @@ -201566,11 +200467,11 @@ - + - + @@ -201780,8 +200681,8 @@ - + @@ -202215,11 +201116,11 @@ - + - + @@ -202401,12 +201302,12 @@ - + - + @@ -202449,7 +201350,7 @@ - + @@ -202661,13 +201562,13 @@ + - - + @@ -205429,6 +204330,7 @@

Confidence Level: 0

+

AUTHORS: PMID:12828998;PMID:9498103;PMID:3955080

 @@ -205437,7 +204339,9 @@ + + @@ -215320,7 +214224,7 @@

Confidence Level: 0

-

AUTHORS: PMID:7821823;PMID:8687421;PMID:8163052

+

AUTHORS: PMID:11955283;PMID:2115809;PMID:2923620;PMID:3338458;PMID:340460;PMID:8401296;PMID:8549872;PMID:8579375;PMID:9171333;PMID:9244403;PMID:9559543;PMID:7821823;PMID:8687421;PMID:8163052

 @@ -215330,10 +214234,14 @@ + + + + @@ -215980,14 +214888,14 @@ + - + - @@ -216011,14 +214919,14 @@ + - + - @@ -216042,14 +214950,14 @@ + - + - @@ -216075,12 +214983,12 @@ + - - + @@ -216229,12 +215137,12 @@ - + - + @@ -216373,11 +215281,11 @@ - + - + @@ -216516,11 +215424,11 @@ - + - + @@ -216658,12 +215566,12 @@ - + - + @@ -216809,12 +215717,12 @@ - + - + @@ -216966,12 +215874,12 @@ + - - + @@ -217124,12 +216032,12 @@ + - - + @@ -217287,11 +216195,11 @@ - + - + @@ -217446,12 +216354,12 @@ - + - + @@ -217602,12 +216510,12 @@ + - - + @@ -217756,11 +216664,11 @@ - + - + @@ -217899,15 +216807,15 @@ + - + - @@ -217931,11 +216839,11 @@ + - - + @@ -218075,10 +216983,10 @@ - + - + @@ -218218,10 +217126,10 @@ - + - + @@ -218361,10 +217269,10 @@ - + - + @@ -218503,11 +217411,11 @@ - + - + @@ -218648,10 +217556,10 @@ - + - + @@ -218795,10 +217703,10 @@ - + - + @@ -218965,42 +217873,6 @@ - - - -

Confidence Level: 0

-

AUTHORS: PMID:1047780;PMID:8973539;PMID:11135616

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -219111,42 +217983,6 @@ - - - -

Confidence Level: 0

-

AUTHORS: PMID:1047780;PMID:8973539;PMID:11135616

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -219479,10 +218315,10 @@ - + - + @@ -219632,11 +218468,11 @@ - + - + @@ -219811,11 +218647,11 @@ - + - + @@ -219941,58 +218777,31 @@

Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - - -

Confidence Level: 0

-

AUTHORS: PMID:8973539;PMID:10407780;PMID:11356167

+

AUTHORS: PMID:1703300

 - + - + + + + - - + - - + - - - - - - - + @@ -220105,42 +218914,6 @@ - - - -

Confidence Level: 0

-

AUTHORS: PMID:8973539;PMID:10407780;PMID:11356167

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -220251,42 +219024,6 @@ - - - -

Confidence Level: 0

-

AUTHORS: PMID:8973539;PMID:10407780;PMID:11356167

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -220615,7 +219352,7 @@ - + @@ -220808,8 +219545,8 @@ - + @@ -220962,8 +219699,8 @@ - + @@ -221121,8 +219858,8 @@ - + @@ -221130,7 +219867,7 @@

Confidence Level: 0

-

AUTHORS: PMID:13295225;PMID:1540149

+

AUTHORS: PMID:13295225;PMID:1540149;PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265

 @@ -221142,9 +219879,12 @@ + + + @@ -221294,8 +220034,8 @@ - + @@ -221303,7 +220043,7 @@

Confidence Level: 0

-

AUTHORS: PMID:13295225;PMID:1540149

+

AUTHORS: PMID:13295225;PMID:1540149;PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265

 @@ -221315,9 +220055,12 @@ + + + @@ -221339,6 +220082,11 @@ + + + + + @@ -221466,8 +220214,8 @@ - + @@ -221475,7 +220223,7 @@

Confidence Level: 0

-

AUTHORS: PMID:13295225;PMID:1540149

+

AUTHORS: PMID:13295225;PMID:1540149;PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265

 @@ -221487,9 +220235,12 @@ + + + @@ -221518,7 +220269,7 @@

Confidence Level: 0

-

AUTHORS: PMID:8012501;PMID:8188243;PMID:13295248

+

AUTHORS: PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265;PMID:8012501;PMID:8188243;PMID:13295248

 @@ -221526,9 +220277,12 @@ + + + @@ -221639,8 +220393,8 @@ - + @@ -221648,7 +220402,7 @@

Confidence Level: 0

-

AUTHORS: PMID:13295225;PMID:3597357

+

AUTHORS: PMID:13295225;PMID:3597357;PMID:17603022;PMID:1774065;PMID:6240978;PMID:7876265

 @@ -221658,9 +220412,12 @@ + + + @@ -221681,6 +220438,11 @@ + + + + + @@ -221808,8 +220570,8 @@ - + @@ -221817,7 +220579,7 @@

Confidence Level: 0

-

AUTHORS: PMID:13295225;PMID:3597357

+

AUTHORS: PMID:17603022;PMID:1774065;PMID:13295225;PMID:3597357;PMID:6240978;PMID:7876265

 @@ -221827,9 +220589,12 @@ + + + @@ -221850,6 +220615,11 @@ + + + + + @@ -221977,8 +220747,8 @@ - + @@ -221986,7 +220756,7 @@

Confidence Level: 0

-

AUTHORS: PMID:13295225;PMID:3597357

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AUTHORS: PMID:13295225;PMID:3597357;PMID:17603022;PMID:1774065;PMID:6240978;PMID:7876265

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AUTHORS: PMID:10709654

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AUTHORS: PMID:10709654

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AUTHORS: PMID:11955283;PMID:2115809;PMID:2923620;PMID:3338458;PMID:340460;PMID:8401296;PMID:8549872;PMID:8579375;PMID:9171333;PMID:9244403;PMID:9559543

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AUTHORS: PMID:11955283;PMID:2115809;PMID:2923620;PMID:3338458;PMID:340460;PMID:8401296;PMID:8549872;PMID:8579375;PMID:9171333;PMID:9244403;PMID:9559543

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AUTHORS: PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046

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AUTHORS: PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046

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AUTHORS: PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046

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AUTHORS: PMID:11864182;PMID:11060344;PMID:10709654;PMID:11060344;PMID:11060344

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AUTHORS: PMID:11356170;PMID:8943006

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AUTHORS: PMID:8902629

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AUTHORS: PMID:8902629;PMID:10709654

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AUTHORS: PMID:11330072;PMID:10709654

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AUTHORS: PMID:18619829

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AUTHORS: PMID:18619829;PMID:6469982

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AUTHORS: PMID:8902629;PMID:19357427

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AUTHORS: PMID:19131563;PMID:16949895

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AUTHORS: PMID:16858612

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AUTHORS: PMID:16858612;PMID:24653705;PMID:9831619;PMID:5555776;PMID:23104810

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AUTHORS: PMID:8824301

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AUTHORS: PMID:11181649

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AUTHORS: PMID:11385633;PMID:8549872

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AUTHORS: PMID:11955283;PMID:2115809;PMID:2923620;PMID:3338458;PMID:340460;PMID:8401296;PMID:8549872;PMID:8579375;PMID:9171333;PMID:9244403;PMID:9559543;PMID:11385633

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AUTHORS: PMID:10893432;PMID:11024018;PMID:11034615;PMID:12679487;PMID:12748858;PMID:1372904;PMID:15546855;PMID:2490366;PMID:7537337;PMID:7789985;PMID:8063771;PMID:8559252;PMID:8806637;PMID:9341168

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AUTHORS: PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265

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Confidence Level: 0

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AUTHORS: PMID:11076394;PMID:11076396;PMID:14579113

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Confidence Level: 0

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Confidence Level: 0

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Confidence Level: 0

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AUTHORS: PMID:10407780;PMID:11356167;PMID:8973539

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AUTHORS: PMID:10407780;PMID:11356167;PMID:8973539;PMID:18536048;PMID:17458872

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Confidence Level: 0

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AUTHORS: PMID:10970790

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Confidence Level: 0

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AUTHORS: PMID:10709654

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -405474,6 +402628,7 @@ + @@ -405524,44 +402679,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:10709654

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -405576,6 +402693,7 @@ + @@ -405586,9 +402704,9 @@ + - @@ -407063,7 +404181,7 @@ - + @@ -407722,11 +404840,11 @@ - + - + @@ -408890,29 +406008,6 @@ - - - -

Confidence Level: 0

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Confidence Level: 0

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AUTHORS: PMID:12828998;PMID:9498103;PMID:3955080

- - - - - - - - - - - - - - - - - - - - - - - - - - @@ -413020,7 +410084,7 @@ - + @@ -413179,42 +410243,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:18536048;PMID:17458872

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Confidence Level: 0

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AUTHORS: PMID:24653705;PMID:9831619;PMID:5555776;PMID:23104810

- - - - - - - - - - - - - - - - - - - - - - - - - @@ -437137,27 +434137,6 @@ - - - -

Confidence Level: 0

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Confidence Level: 0

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AUTHORS: PMID:19131563;PMID:16949895

- - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -437536,10 +434483,10 @@ + - @@ -438088,7 +435035,7 @@ - +

Confidence Level: 0

@@ -438102,6 +435049,7 @@ + @@ -438114,36 +435062,11 @@ - +

Confidence Level: 0

-

AUTHORS: PMID:21343587

- - - - - - - - - - - - - - - - - - - - - - - -

Confidence Level: 0

-

AUTHORS: PMID:12904817

+

AUTHORS: PMID:12904817;PMID:12663291

 @@ -438152,6 +435075,7 @@ + @@ -438164,32 +435088,7 @@ - - - -

Confidence Level: 0

-

AUTHORS: PMID:12904817

- - - - - - - - - - - - - - - - - - - - - +

Confidence Level: 0

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Confidence Level: 0

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AUTHORS: PMID:12904817;PMID:12663291

- - - - - - - @@ -438233,10 +435108,10 @@ - + - + @@ -459304,10 +456179,10 @@ - + - + @@ -465946,12 +462821,12 @@ + - - + @@ -466108,12 +462983,12 @@ + - - + @@ -466267,12 +463142,12 @@ + - - + @@ -467506,11 +464381,11 @@ - +

Confidence Level: 0

-

AUTHORS: PMID:8145081

+

AUTHORS: PMID:8145081;PMID:10856719

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Confidence Level: 0

-

AUTHORS: PMID:8145081

+

AUTHORS: PMID:8145081;PMID:10856719

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Confidence Level: 0

-

AUTHORS: PMID:8145081

+

AUTHORS: PMID:8145081;PMID:10856719

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Confidence Level: 0

-

AUTHORS: PMID:8145081

+

AUTHORS: PMID:8145081;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:10856719

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Confidence Level: 0

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AUTHORS: PMID:10856719

- - - - - - - - - - - - - - - - - - - - - - - -

Confidence Level: 0

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AUTHORS: PMID:10856719

- - - - - - - - - - - - - - - - - - - - @@ -470594,32 +467411,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - - @@ -470658,32 +467449,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - - @@ -470722,32 +467487,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - - @@ -470786,32 +467525,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - - @@ -470850,32 +467563,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - - @@ -470914,32 +467601,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - - @@ -470978,31 +467639,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - @@ -471041,31 +467677,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - @@ -471104,31 +467715,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - @@ -471167,31 +467753,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - @@ -471230,31 +467791,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - @@ -471293,31 +467829,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - @@ -471356,31 +467867,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - @@ -471419,31 +467905,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - @@ -471482,31 +467943,6 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - @@ -471545,32 +467981,7 @@ - - - -

Confidence Level: 0

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AUTHORS: PMID:11581500;PMID:10856719

- - - - - - - - - - - - - - - - - - - - - +

Confidence Level: 0

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Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - @@ -478231,7 +474619,7 @@ - +

Confidence Level: 0

@@ -478243,6 +474631,7 @@ + @@ -478277,31 +474666,7 @@ - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - - +

Confidence Level: 0

@@ -478313,6 +474678,7 @@ + @@ -478347,31 +474713,7 @@ - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - - +

Confidence Level: 0

@@ -478383,6 +474725,7 @@ + @@ -478417,31 +474760,7 @@ - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - - +

Confidence Level: 0

@@ -478453,6 +474772,7 @@ + @@ -478487,31 +474807,7 @@ - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - - +

Confidence Level: 0

@@ -478523,6 +474819,7 @@ + @@ -478557,30 +474854,6 @@ - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - @@ -478931,7 +475204,10 @@ + + + @@ -479222,7 +475498,12 @@ + + + + + @@ -482078,10 +478359,10 @@ + - @@ -482886,8 +479167,8 @@ + - @@ -482918,8 +479199,8 @@ + - @@ -483016,8 +479297,8 @@ + - @@ -483048,8 +479329,8 @@ + - @@ -483177,10 +479458,10 @@ + - @@ -488821,10 +485102,10 @@ - + @@ -488853,15 +485134,15 @@ + - + - @@ -501867,16 +498148,16 @@ + - + - @@ -508638,27 +504919,6 @@ - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - - - @@ -509108,25 +505368,6 @@ - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - @@ -512318,45 +508559,6 @@ - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -514298,52 +510500,6 @@ - - - -

Confidence Level: 0

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - @@ -515043,6 +511199,102 @@ + + + +

Confidence Level: 0

+

AUTHORS: PMID:10677481;PMID:16721829;PMID:17126822;PMID:235695;PMID:24055;PMID:6116153;PMID:6116159;PMID:6116163;PMID:6138355;PMID:7732023;PMID:9099716

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +

Confidence Level: 0

+ + + + + + + + + + + + + + + + + + + + + +

Confidence Level: 0

+

AUTHORS: PMID:30378035

+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -516835,6 +513087,35 @@ + + + +

Confidence Level: 0

+

AUTHORS: PMID:10391219

+

NOTES: reaction added by gap filling

+ + + + + + + + + + + + + + + + + + + + + + + @@ -516864,7 +513145,7 @@ - +

Confidence Level: 0

@@ -516874,13 +513155,13 @@ - + - - - + + + @@ -516890,12 +513171,12 @@ - + - + @@ -517000,36 +513281,6 @@ - - - -

Confidence Level: 0

-

AUTHORS: PMID:10391219;PMID:12133002;PMID:4475632;PMID:5810070

-

NOTES: reaction added by gap filling

- - - - - - - - - - - - - - - - - - - - - - - - @@ -517406,39 +513657,33 @@ - +

Confidence Level: 0

-

AUTHORS: PMID:12555668;PMID:1443581;PMID:14612543;PMID:4344987;PMID:6176238

NOTES: reaction added by gap filling

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+515859,10 @@ - - @@ -519722,7 +515953,6 @@ - @@ -519736,6 +515966,7 @@ + @@ -520175,7 +516406,6 @@ - @@ -520357,15 +516587,12 @@ - - - @@ -520376,6 +516603,9 @@ + + + @@ -520677,15 +516907,15 @@ - - + + @@ -520720,17 +516950,12 @@ - - - - - @@ -520820,7 +517045,6 @@ - @@ -520828,7 +517052,6 @@ - @@ -521000,8 +517223,6 @@ - - @@ -521482,12 +517703,12 @@ + - + - @@ -521614,7 +517835,6 @@ - @@ -522844,7 +519064,6 @@ - @@ -522902,7 +519121,6 @@ - @@ -523281,7 +519499,6 @@ - @@ -523981,7 +520198,6 @@ - @@ -523992,7 +520208,6 @@ - @@ -524175,7 +520390,6 @@ - @@ -524232,8 +520446,10 @@ - + + + @@ -524515,7 +520731,6 @@ - @@ -524529,18 +520744,10 @@ - - - - - - - - @@ -524552,8 +520759,6 @@ - - @@ -524580,16 +520785,13 @@ - - - @@ -524607,7 +520809,6 @@ - @@ -524642,7 +520843,6 @@ - @@ -525237,7 +521437,6 @@ - @@ -525539,7 +521738,7 @@ - + @@ -525702,7 +521901,6 @@ - @@ -526212,7 +522410,6 @@ - @@ -526237,8 +522434,6 @@ - - @@ -526286,6 +522481,7 @@ + @@ -526408,7 +522604,7 @@ - + @@ -527033,7 +523229,6 @@ - @@ -527228,7 +523423,6 @@ - @@ -527364,7 +523558,6 @@ - @@ -527402,7 +523595,6 @@ - @@ -527595,7 +523787,6 @@ - @@ -527714,7 +523905,6 @@ - @@ -527896,8 +524086,6 @@ - - @@ -528018,17 +524206,10 @@ - - - - - - - @@ -529040,9 +525221,6 @@ - - - @@ -529118,7 +525296,6 @@ - @@ -529150,7 +525327,6 @@ - @@ -529788,7 +525964,6 @@ - @@ -530611,7 +526786,6 @@ - @@ -530634,7 +526808,6 @@ - @@ -530652,7 +526825,6 @@ - @@ -530675,8 +526847,6 @@ - - @@ -530703,9 +526873,6 @@ - - - @@ -531000,7 +527167,6 @@ - @@ -531072,7 +527238,6 @@ - @@ -531081,11 +527246,8 @@ - - - @@ -531590,10 +527752,6 @@ - - - - @@ -531638,39 +527796,22 @@ - - - - - - - - - - - - - - - - - @@ -531812,15 +527953,10 @@ - - - - - @@ -532002,6 +528138,7 @@ + @@ -532032,7 +528169,6 @@ - @@ -532092,8 +528228,6 @@ - - @@ -532169,7 +528303,6 @@ - @@ -532193,24 +528326,19 @@ - - - - - diff --git a/model/Worm-GEM.yml b/model/Worm-GEM.yml index 009a6a7..8c8582d 100644 --- a/model/Worm-GEM.yml +++ b/model/Worm-GEM.yml @@ -4,7 +4,7 @@ short_name: "Worm-GEM" full_name: "" version: "" - date: "2023-08-09" + date: "2023-10-01" taxonomy: "" github: "" description: "" @@ -548,13 +548,6 @@ - formula: "C20H29O3" - charge: -1 - inchis: "" - - !!omap - - id: "MAM00029c" - - name: "(18R)-hydroxy-(5Z,8Z,11Z,14Z,16E)-eicosapentaenoic acid" - - compartment: "c" - - formula: "C20H29O3" - - charge: -1 - - inchis: "" - !!omap - id: "MAM00030c" - name: "(1aalpha,2beta,3alpha,11calpha)-1a,2,3,11c-tetrahydro-6,11-dimethylbenzo[6,7]phenanthro[3,4-b]oxirene-2,3-diol" @@ -618,13 +611,6 @@ - formula: "C27H44O3" - charge: 0 - inchis: "" - - !!omap - - id: "MAM00036m" - - name: "(24R,25R)3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA" - - compartment: "m" - - formula: "C48H76N7O21P3S" - - charge: -4 - - inchis: "" - !!omap - id: "MAM00036x" - name: "(24R,25R)3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA" @@ -2622,7 +2608,7 @@ - inchis: "" - !!omap - id: "MAM00185c" - - name: "[apocarboxlase]" + - name: "[apocarboxylase]" - compartment: "c" - formula: "XH" - charge: 0 @@ -6582,20 +6568,6 @@ - formula: "C20H31O4" - charge: -1 - inchis: "" - - !!omap - - id: "MAM00591c" - - name: "20-hydroxy-arachidonate" - - compartment: "c" - - formula: "C20H31O3" - - charge: -1 - - inchis: "" - - !!omap - - id: "MAM00591e" - - name: "20-hydroxy-arachidonate" - - compartment: "e" - - formula: "C20H31O3" - - charge: -1 - - inchis: "" - !!omap - id: "MAM00592r" - name: "20-hydroxycholesterol" @@ -6869,13 +6841,6 @@ - formula: "C48H76N7O21P3S" - charge: -4 - inchis: "" - - !!omap - - id: "MAM00616m" - - name: "25(R)THCA-CoA" - - compartment: "m" - - formula: "C48H76N7O20P3S" - - charge: -4 - - inchis: "" - !!omap - id: "MAM00616x" - name: "25(R)THCA-CoA" @@ -6897,13 +6862,6 @@ - formula: "C48H76N7O19P3S" - charge: -4 - inchis: "" - - !!omap - - id: "MAM00618m" - - name: "25(S)THCA-CoA" - - compartment: "m" - - formula: "C48H76N7O20P3S" - - charge: -4 - - inchis: "" - !!omap - id: "MAM00618x" - name: "25(S)THCA-CoA" @@ -8290,13 +8248,6 @@ - formula: "C27H46O5" - charge: 0 - inchis: "InChI=1/C27H46O5/c1-15(6-9-22(30)25(2,3)32)18-7-8-19-24-20(14-23(31)27(18,19)5)26(4)11-10-17(28)12-16(26)13-21(24)29/h15-21,23-24,28-29,31-32H,6-14H2,1-5H3/t15?,16?,17?,18-,19?,20?,21?,23?,24?,26+,27-/s2" - - !!omap - - id: "MAM00748m" - - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-24-oxocholestanoyl-CoA" - - compartment: "m" - - formula: "C48H74N7O21P3S" - - charge: -4 - - inchis: "" - !!omap - id: "MAM00748x" - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-24-oxocholestanoyl-CoA" @@ -8304,13 +8255,6 @@ - formula: "C48H74N7O21P3S" - charge: -4 - inchis: "" - - !!omap - - id: "MAM00749m" - - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA" - - compartment: "m" - - formula: "C48H74N7O20P3S" - - charge: -4 - - inchis: "" - !!omap - id: "MAM00749x" - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA" @@ -8437,13 +8381,6 @@ - formula: "C27H45O4" - charge: -1 - inchis: "" - - !!omap - - id: "MAM00759c" - - name: "3alpha-hydroxy-5alpha-pregnan-20-one" - - compartment: "c" - - formula: "C21H34O2" - - charge: 0 - - inchis: "" - !!omap - id: "MAM00760c" - name: "3-amino-propanal" @@ -9816,13 +9753,6 @@ - formula: "C45H68N7O18P3S" - charge: -4 - inchis: "" - - !!omap - - id: "MAM00902c" - - name: "3-oxo-tetracosa-9,12,15,18,21-all-cis-pentaenoyl-CoA" - - compartment: "c" - - formula: "C45H66N7O18P3S" - - charge: -4 - - inchis: "" - !!omap - id: "MAM00903c" - name: "3-oxo-tetracosa-9,12,15,18-all-cis-tetraenoyl-CoA" @@ -13582,48 +13512,6 @@ - formula: "S" - charge: -2 - inchis: "" - - !!omap - - id: "MAM01268c" - - name: "activation-ppara" - - compartment: "c" - - formula: "C2303H3655N619O695S34R" - - charge: 0 - - inchis: "" - - !!omap - - id: "MAM01268m" - - name: "activation-ppara" - - compartment: "m" - - formula: "C2303H3655N619O695S34R" - - charge: 0 - - inchis: "" - - !!omap - - id: "MAM01268n" - - name: "activation-ppara" - - compartment: "n" - - formula: "C2303H3655N619O695S34R" - - charge: 0 - - inchis: "" - - !!omap - - id: "MAM01268x" - - name: "activation-ppara" - - compartment: "x" - - formula: "C2303H3655N619O695S34R" - - charge: 0 - - inchis: "" - - !!omap - - id: "MAM01268r" - - name: "activation-ppara" - - compartment: "r" - - formula: "C2303H3655N619O695S34R" - - charge: 0 - - inchis: "" - - !!omap - - id: "MAM01268e" - - name: "activation-ppara" - - compartment: "e" - - formula: "C2303H3655N619O695S34R" - - charge: 0 - - inchis: "" - !!omap - id: "MAM01269c" - name: "acyl-CoA-bile-PC pool" @@ -15633,6 +15521,13 @@ - formula: "C17H26N4O5SX" - charge: -1 - inchis: "" + - !!omap + - id: "MAM01422m" + - name: "carboxybiotin-carboxyl-carrier" + - compartment: "m" + - formula: "C17H26N4O5SX" + - charge: -1 + - inchis: "" - !!omap - id: "MAM01423c" - name: "carnosine" @@ -15955,13 +15850,6 @@ - formula: "C24H39O5" - charge: -1 - inchis: "" - - !!omap - - id: "MAM01445m" - - name: "cholate" - - compartment: "m" - - formula: "C24H39O5" - - charge: -1 - - inchis: "" - !!omap - id: "MAM01445x" - name: "cholate" @@ -16991,13 +16879,6 @@ - formula: "C45H70N7O20P3S" - charge: -4 - inchis: "" - - !!omap - - id: "MAM01514m" - - name: "choloyl-CoA" - - compartment: "m" - - formula: "C45H70N7O20P3S" - - charge: -4 - - inchis: "" - !!omap - id: "MAM01514x" - name: "choloyl-CoA" @@ -21247,13 +21128,6 @@ - formula: "CO2R" - charge: -1 - inchis: "" - - !!omap - - id: "MAM01816n" - - name: "fatty acid-ligands" - - compartment: "n" - - formula: "R" - - charge: 0 - - inchis: "" - !!omap - id: "MAM01819e" - name: "fatty acid-uptake pool" @@ -32251,27 +32125,6 @@ - formula: "C10H13N2O4" - charge: -1 - inchis: "" - - !!omap - - id: "MAM02757c" - - name: "PPARA" - - compartment: "c" - - formula: "C2303H3655N619O695S34" - - charge: 0 - - inchis: "" - - !!omap - - id: "MAM02757l" - - name: "PPARA" - - compartment: "l" - - formula: "C2303H3655N619O695S34" - - charge: 0 - - inchis: "" - - !!omap - - id: "MAM02757n" - - name: "PPARA" - - compartment: "n" - - formula: "C2303H3655N619O695S34" - - charge: 0 - - inchis: "" - !!omap - id: "MAM02759c" - name: "PPi" @@ -37305,13 +37158,6 @@ - formula: "C6H10O5" - charge: 0 - inchis: "" - - !!omap - - id: "MAM03162c" - - name: "5,6-dihydroxyindole" - - compartment: "c" - - formula: "C8H7NO2" - - charge: 0 - - inchis: "" - !!omap - id: "MAM03163c" - name: "indole-5,6-quinone" @@ -37396,13 +37242,6 @@ - formula: "C9H9O4" - charge: -1 - inchis: "" - - !!omap - - id: "MAM03226m" - - name: "(S)-3-Hydroxyisobutyryl Coenzyme A" - - compartment: "m" - - formula: "C25H38N7O18P3S" - - charge: -4 - - inchis: "" - !!omap - id: "MAM00799c" - name: "3-hydroxypropionyl-CoA" @@ -37573,7 +37412,7 @@ - inchis: "" - !!omap - id: "MAM00185m" - - name: "[apocarboxlase]" + - name: "[apocarboxylase]" - compartment: "m" - formula: "XH" - charge: 0 @@ -37970,13 +37809,6 @@ - formula: "C30H48N7O17P3S" - charge: -4 - inchis: "" - - !!omap - - id: "MAM03554c" - - name: "4,8-Dimethylnonanoyl Coenzyme A" - - compartment: "c" - - formula: "C32H52N7O17P3S" - - charge: -4 - - inchis: "" - !!omap - id: "MAM03554m" - name: "4,8-Dimethylnonanoyl Coenzyme A" @@ -38124,13 +37956,6 @@ - formula: "C8H12O10PR2" - charge: -1 - inchis: "" - - !!omap - - id: "MAM03884e" - - name: "Phytanate" - - compartment: "e" - - formula: "C20H39O2" - - charge: -1 - - inchis: "" - !!omap - id: "MAM02808e" - name: "PS-LD pool" @@ -38201,13 +38026,6 @@ - formula: "C40H68N7O17P3S" - charge: -4 - inchis: "" - - !!omap - - id: "MAM03884c" - - name: "Phytanate" - - compartment: "c" - - formula: "C20H39O2" - - charge: -1 - - inchis: "" - !!omap - id: "MAM03791m" - name: "11-Octadecenoyl Coenzyme A" @@ -38656,13 +38474,6 @@ - formula: "C8H11NO10PR2" - charge: -1 - inchis: "" - - !!omap - - id: "MAM03884x" - - name: "Phytanate" - - compartment: "x" - - formula: "C20H39O2" - - charge: -1 - - inchis: "" - !!omap - id: "MAM01291x" - name: "adrenic acid" @@ -38915,20 +38726,6 @@ - formula: "C48H74N7O19P3S" - charge: -4 - inchis: "" - - !!omap - - id: "MAM03318r" - - name: "Chenodeoxycholate" - - compartment: "r" - - formula: "C24H39O4" - - charge: -1 - - inchis: "" - - !!omap - - id: "MAM03318c" - - name: "Chenodeoxycholate" - - compartment: "c" - - formula: "C24H39O4" - - charge: -1 - - inchis: "" - !!omap - id: "MAM00726m" - name: "3,4-dihydroxymandelaldehyde" @@ -38978,13 +38775,6 @@ - formula: "C30H50O" - charge: 0 - inchis: "InChI=1S/C30H50O/c1-20(2)10-9-11-21(3)22-14-18-30(8)24-12-13-25-27(4,5)26(31)16-17-28(25,6)23(24)15-19-29(22,30)7/h10,21-22,25-26,31H,9,11-19H2,1-8H3/t21-,22-,25+,26+,28-,29-,30+/m1/s1" - - !!omap - - id: "MAM03318e" - - name: "Chenodeoxycholate" - - compartment: "e" - - formula: "C24H39O4" - - charge: -1 - - inchis: "" - !!omap - id: "MAM00755m" - name: "3alpha,7alpha-dihydroxy-5beta-cholest-24-enoyl-CoA" @@ -39790,13 +39580,6 @@ - formula: "C45H70N7O19P3S" - charge: -4 - inchis: "" - - !!omap - - id: "MAM03318m" - - name: "Chenodeoxycholate" - - compartment: "m" - - formula: "C24H39O4" - - charge: -1 - - inchis: "" - !!omap - id: "MAM00614m" - name: "25(R)DHCA-CoA" @@ -40756,13 +40539,6 @@ - formula: "C23H34O3" - charge: 0 - inchis: "InChI=1S/C23H34O3/c1-15(10-12-24)20-8-9-21-17(5-4-11-23(20,21)3)6-7-18-13-19(25)14-22(26)16(18)2/h6-7,12,15,19-22,25-26H,2,4-5,8-11,13-14H2,1,3H3/b17-6+,18-7-/t15-,19+,20-,21+,22+,23?/m0/s1" - - !!omap - - id: "MAM03354c" - - name: "Tetracosa-9,12,15,18-All-Cis-Tetraenoyl Coenzyme A" - - compartment: "c" - - formula: "C45H70N7O17P3S" - - charge: -4 - - inchis: "" - !!omap - id: "MAM00864r" - name: "3-oxo-docosa-7,10,13,16-all-cis-tetraenoyl-CoA" @@ -40924,13 +40700,6 @@ - formula: "C39H62N7O17P3S" - charge: -4 - inchis: "" - - !!omap - - id: "MAM03367m" - - name: "24(R),25(R)-Varanoyl Coenzyme A" - - compartment: "m" - - formula: "C48H76N7O21P3S" - - charge: -4 - - inchis: "" - !!omap - id: "MAM03367x" - name: "24(R),25(R)-Varanoyl Coenzyme A" @@ -40952,20 +40721,6 @@ - formula: "C48H74N7O21P3S" - charge: -4 - inchis: "" - - !!omap - - id: "MAM03368m" - - name: "24-Oxo-25(R)-Trihydroxycoprostanoyl Coenzyme A" - - compartment: "m" - - formula: "C48H74N7O21P3S" - - charge: -4 - - inchis: "" - - !!omap - - id: "MAM03368x" - - name: "24-Oxo-25(R)-Trihydroxycoprostanoyl Coenzyme A" - - compartment: "x" - - formula: "C48H74N7O21P3S" - - charge: -4 - - inchis: "" - !!omap - id: "MAM01428e" - name: "CDP-ethanolamine" @@ -41183,13 +40938,6 @@ - formula: "C20H31O4" - charge: -1 - inchis: "" - - !!omap - - id: "MAM03325c" - - name: "3-(Methylthio)Propionate" - - compartment: "c" - - formula: "C4H7O2S" - - charge: -1 - - inchis: "" - !!omap - id: "MAM03510c" - name: "Methanethiol" @@ -41330,13 +41078,6 @@ - formula: "C41H59N7O22P3S" - charge: -5 - inchis: "" - - !!omap - - id: "MAM03332c" - - name: "(8Z,11Z,14Z)-Eicosatrienoic Acid" - - compartment: "c" - - formula: "C20H33O2" - - charge: -1 - - inchis: "" - !!omap - id: "MAM02785n" - name: "prostaglandin E1" @@ -41792,13 +41533,6 @@ - formula: "C17H33NO5" - charge: 0 - inchis: "InChI=1/C17H33NO5/c1-5-6-7-8-9-10-14(19)13-17(22)23-15(18(2,3)4)11-12-16(20)21/h14-15,19H,5-13H2,1-4H3" - - !!omap - - id: "MAM03540c" - - name: "Lauroyl Carnitine" - - compartment: "c" - - formula: "C19H37NO4" - - charge: 0 - - inchis: "InChI=1S/C19H37NO4/c1-5-6-7-8-9-10-11-12-13-14-19(23)24-17(15-18(21)22)16-20(2,3)4/h17H,5-16H2,1-4H3/t17-/m1/s1" - !!omap - id: "MAM00042c" - name: "(2E)-dodecenoyl-CoA" @@ -42254,13 +41988,6 @@ - formula: "C19H37NO5" - charge: 0 - inchis: "InChI=1/C19H37NO5/c1-5-6-7-8-9-10-11-12-16(21)13-19(24)25-17(14-18(22)23)15-20(2,3)4/h16-17,21H,5-15H2,1-4H3" - - !!omap - - id: "MAM03540e" - - name: "Lauroyl Carnitine" - - compartment: "e" - - formula: "C19H37NO4" - - charge: 0 - - inchis: "InChI=1S/C19H37NO4/c1-5-6-7-8-9-10-11-12-13-14-19(23)24-17(15-18(21)22)16-20(2,3)4/h17H,5-16H2,1-4H3/t17-/m1/s1" - !!omap - id: "MAM03541e" - name: "Dodecenoyl Carnitine" @@ -45390,13 +45117,6 @@ - formula: "C20H31O4" - charge: 0 - inchis: "" - - !!omap - - id: "MAM03332e" - - name: "(8Z,11Z,14Z)-Eicosatrienoic Acid" - - compartment: "e" - - formula: "C20H33O2" - - charge: -1 - - inchis: "" - !!omap - id: "MAM00378e" - name: "15(S)-HETrE" @@ -46139,13 +45859,6 @@ - formula: "C9H9O3" - charge: -1 - inchis: "" - - !!omap - - id: "MAM03231c" - - name: "3-Hydroxyphenylpropionic Acid (3-Hppa)" - - compartment: "c" - - formula: "C9H9O3" - - charge: -1 - - inchis: "" - !!omap - id: "MAM02622e" - name: "normetanephrine" @@ -57143,6 +56856,27 @@ - formula: "C17H23N5O15P2" - charge: -2 - inchis: "" + - !!omap + - id: "MAM01435m" + - name: "chenodiol" + - compartment: "m" + - formula: "C24H39O4" + - charge: -1 + - inchis: "" + - !!omap + - id: "MAM01729e" + - name: "dodecanoylcarnitine" + - compartment: "e" + - formula: "C19H37NO4" + - charge: 0 + - inchis: "" + - !!omap + - id: "MAM00853c" + - name: "3-oxo-all-cis-6,9,12,15,18-tetracosapentaenoyl-CoA" + - compartment: "c" + - formula: "C45H66N7O18P3S" + - charge: -4 + - inchis: "" - !!omap - id: "MAM15003c" - name: "L-Allothreonine" @@ -60075,8 +59809,8 @@ - upper_bound: 1000 - gene_reaction_rule: "acdh-1 or acdh-10 or acdh-13 or acdh-3 or acdh-4 or acdh-8 or acdh-9 or acds-10" - rxnNotes: "" - - eccodes: "1.3.99.3" - - references: "" + - eccodes: "1.3.99.3;1.3.8.7" + - references: "PMID:10502673;PMID:3597357;PMID:4062874" - subsystem: - "Propanoate metabolism" - confidence_score: 0 @@ -60379,7 +60113,7 @@ - MAM02553c: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "C31C9.2" + - gene_reaction_rule: "phdh-1" - rxnNotes: "" - eccodes: "1.1.1.95" - references: "" @@ -61138,7 +60872,7 @@ - MAM02806c: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "T19B4.3" + - gene_reaction_rule: "aprt-1" - rxnNotes: "" - eccodes: "2.4.2.7" - references: "PMID:6778226;PMID:692402" @@ -61155,7 +60889,7 @@ - MAM02806e: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "T19B4.3" + - gene_reaction_rule: "aprt-1" - rxnNotes: "" - eccodes: "2.4.2.7" - references: "PMID:6778226;PMID:692402" @@ -61967,9 +61701,9 @@ - id: "MAR04650" - name: "Xanthine:oxygen oxidoreductase" - metabolites: !!omap + - MAM01802x: -1 + - MAM01803x: 1 - MAM02040x: -1 - - MAM02041x: 1 - - MAM02630x: -1 - MAM03120x: 1 - MAM03148x: -1 - lower_bound: 0 @@ -62427,10 +62161,10 @@ - id: "MAR08755" - name: "Hypoxanthine:oxygen oxidoreductase" - metabolites: !!omap + - MAM01802x: -1 + - MAM01803x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02159x: -1 - - MAM02630x: -1 - MAM03148x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -62775,7 +62509,7 @@ - MAM02990c: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "trxr-1 or trxr-2" + - gene_reaction_rule: "trxr-1" - rxnNotes: "" - eccodes: "1.8.1.9" - references: "PMID:10462449;PMID:11060283;PMID:15110392" @@ -63470,7 +63204,7 @@ - gene_reaction_rule: "upb-1" - rxnNotes: "" - eccodes: "3.5.1.6" - - references: "PMID:10542323;PMID:3678231" + - references: "PMID:10542323;PMID:3678231;PMID:11508704;PMID:5773299" - subsystem: - "Pyrimidine metabolism" - confidence_score: 0 @@ -65421,10 +65155,10 @@ - MAM02990m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "trxr-1 or trxr-2" + - gene_reaction_rule: "trxr-2" - rxnNotes: "" - eccodes: "1.8.1.9" - - references: "" + - references: "PMID:5553404;PMID:5671058" - subsystem: - "Nucleotide metabolism" - confidence_score: 0 @@ -66055,11 +65789,11 @@ - name: "D-Aspartate:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM01641x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02578x: 1 - - MAM02630x: -1 - MAM02633x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -66244,24 +65978,6 @@ - subsystem: - "Arginine and proline metabolism" - confidence_score: 0 - - !!omap - - id: "MAR03838" - - name: "" - - metabolites: !!omap - - MAM00559m: -1 - - MAM02039m: -1 - - MAM02770m: 1 - - MAM03102m: -1 - - MAM03103m: 1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "prdh-1" - - rxnNotes: "" - - eccodes: "1.5.99.8" - - references: "PMID:18506409" - - subsystem: - - "Arginine and proline metabolism" - - confidence_score: 0 - !!omap - id: "MAR03895" - name: "ATP:L-glutamate 5-phosphotransferase" @@ -66841,10 +66557,10 @@ - name: "N1-acetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming)" - metabolites: !!omap - MAM01250x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02504x: -1 - - MAM02630x: -1 - MAM02923x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -66897,10 +66613,10 @@ - name: "N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming)" - metabolites: !!omap - MAM01250x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02503x: -1 - - MAM02630x: -1 - MAM02812x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -66935,11 +66651,11 @@ - name: "" - metabolites: !!omap - MAM01250x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02501x: -1 - MAM02503x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "amx-3 or hpo-15" @@ -67283,7 +66999,7 @@ - gene_reaction_rule: "prdh-1" - rxnNotes: "" - eccodes: "1.5.99.8" - - references: "" + - references: "PMID:18506409" - subsystem: - "Arginine and proline metabolism" - confidence_score: 0 @@ -67372,8 +67088,8 @@ - upper_bound: 1000 - gene_reaction_rule: "acdh-1 or acdh-3 or acdh-4" - rxnNotes: "" - - eccodes: "1.3.8.5" - - references: "" + - eccodes: "1.3.8.5;1.3.8.1;1.3.99.12" + - references: "PMID:12855692;PMID:6401712;PMID:6874697;PMID:3597357" - subsystem: - "Glycine, serine and threonine metabolism" - confidence_score: 0 @@ -67387,10 +67103,10 @@ - MAM02189m: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "acdh-1 or acdh-3 or acdh-4" + - gene_reaction_rule: "acdh-1 or acdh-3 or acdh-4 or ivd-1" - rxnNotes: "" - - eccodes: "1.3.8.5" - - references: "" + - eccodes: "1.3.8.4;1.3.8.5" + - references: "PMID:3597357;PMID:9214289" - subsystem: - "Glycine, serine and threonine metabolism" - confidence_score: 0 @@ -67460,8 +67176,8 @@ - upper_bound: 1000 - gene_reaction_rule: "acdh-1 or acdh-3 or acdh-4" - rxnNotes: "" - - eccodes: "1.3.8.5" - - references: "" + - eccodes: "1.3.8.5;1.3.8.1;1.3.99.12" + - references: "PMID:6401712" - subsystem: - "Glycine, serine and threonine metabolism" - confidence_score: 0 @@ -67476,7 +67192,7 @@ - MAM02553c: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "C31C9.2" + - gene_reaction_rule: "phdh-1" - rxnNotes: "" - eccodes: "1.1.1.95" - references: "PMID:14645240" @@ -67556,11 +67272,11 @@ - id: "MAR03849" - name: "sarcosine:oxygen oxidoreductase (demethylating)" - metabolites: !!omap + - MAM01802x: -1 + - MAM01803x: 1 - MAM01831x: 1 - MAM01986x: 1 - MAM02040x: -1 - - MAM02041x: 1 - - MAM02630x: -1 - MAM02880x: -1 - lower_bound: 0 - upper_bound: 1000 @@ -67836,13 +67552,13 @@ - id: "MAR04789" - name: "glycine:oxygen oxidoreductase (deaminating)" - metabolites: !!omap + - MAM01802x: -1 + - MAM01803x: 1 - MAM01986x: -1 - MAM02007x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02578x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "daao-1" @@ -68746,12 +68462,12 @@ - name: "L-lysine:oxygen 2-oxidoreductase (deaminating)" - metabolites: !!omap - MAM01157x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02426x: -1 - MAM02578x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "" @@ -68800,10 +68516,10 @@ - name: "L-Pipecolate:oxygen 1,6-oxidoreductase" - metabolites: !!omap - MAM00556x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - - MAM02041x: 1 - MAM02413x: -1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "C15B12.1" @@ -69458,40 +69174,6 @@ - subsystem: - "Tyrosine metabolism" - confidence_score: 0 - - !!omap - - id: "MAR09733" - - name: "" - - metabolites: !!omap - - MAM01596c: 1 - - MAM02039c: -1 - - MAM02355c: -1 - - MAM03162c: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Tyrosine metabolism" - - confidence_score: 0 - - !!omap - - id: "MAR09734" - - name: "5,6-dihydroxyindole:oxygen oxidoreductase" - - metabolites: !!omap - - MAM02040c: 2 - - MAM02630c: -1 - - MAM03162c: -2 - - MAM03163c: 2 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "tyr-2" - - rxnNotes: "" - - eccodes: "1.14.18.1" - - references: "" - - subsystem: - - "Tyrosine metabolism" - - confidence_score: 0 - !!omap - id: "MAR03206" - name: "acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase" @@ -69502,7 +69184,7 @@ - MAM02774m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16" - references: "PMID:10064897;PMID:1121274;PMID:15043762;PMID:2575092;PMID:6378901;PMID:7958339" @@ -69529,23 +69211,6 @@ - subsystem: - "Valine, leucine, and isoleucine metabolism" - confidence_score: 0 - - !!omap - - id: "MAR03211" - - name: "" - - metabolites: !!omap - - MAM01265m: 1 - - MAM02774m: -1 - - MAM03102m: 1 - - MAM03103m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acdh-10 or acdh-8" - - rxnNotes: "" - - eccodes: "1.3.8.7" - - references: "PMID:10502673;PMID:3597357;PMID:4062874" - - subsystem: - - "Valine, leucine, and isoleucine metabolism" - - confidence_score: 0 - !!omap - id: "MAR03213" - name: "Methylmalonyl-CoA epimerase" @@ -70201,25 +69866,6 @@ - subsystem: - "Phenylalanine, tyrosine and tryptophan biosynthesis" - confidence_score: 0 - - !!omap - - id: "MAR04242" - - name: "glutaryl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase (decarboxylating)" - - metabolites: !!omap - - MAM01596m: 1 - - MAM01622m: 1 - - MAM01977m: -1 - - MAM02039m: -1 - - MAM03102m: 1 - - MAM03103m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "F54D5.7" - - rxnNotes: "" - - eccodes: "1.3.8.6" - - references: "PMID:3081514" - - subsystem: - - "Phenylalanine, tyrosine and tryptophan biosynthesis" - - confidence_score: 0 - !!omap - id: "MAR04243" - name: "glutaryl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase (decarboxylating)" @@ -70235,7 +69881,7 @@ - gene_reaction_rule: "F54D5.7" - rxnNotes: "" - eccodes: "1.3.8.6" - - references: "" + - references: "PMID:3081514" - subsystem: - "Phenylalanine, tyrosine and tryptophan biosynthesis" - confidence_score: 0 @@ -73586,7 +73232,7 @@ - MAM02889c: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "F13H8.9" + - gene_reaction_rule: "scly-1" - rxnNotes: "" - eccodes: "4.4.1.16" - references: "" @@ -73734,7 +73380,7 @@ - MAM02895c: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F13H8.9" + - gene_reaction_rule: "scly-1" - rxnNotes: "" - eccodes: "4.4.1.16" - references: "" @@ -73765,11 +73411,11 @@ - name: "D-alanine:oxygen oxidoreductase (deaminating)" - metabolites: !!omap - MAM01638x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02578x: 1 - - MAM02630x: -1 - MAM02819x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -73786,11 +73432,11 @@ - metabolites: !!omap - MAM01101x: 1 - MAM01640x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02578x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "daao-1" @@ -73806,11 +73452,11 @@ - metabolites: !!omap - MAM01073x: 1 - MAM01740x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02578x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "daao-1" @@ -73839,23 +73485,6 @@ - subsystem: - "Valine, leucine, and isoleucine metabolism" - confidence_score: 0 - - !!omap - - id: "MAR03751" - - name: "" - - metabolites: !!omap - - MAM02180m: -1 - - MAM02468m: 1 - - MAM03102m: 1 - - MAM03103m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acdh-1 or acdh-3 or acdh-4" - - rxnNotes: "" - - eccodes: "1.3.8.1;1.3.99.12" - - references: "PMID:12855692;PMID:6401712;PMID:6874697;PMID:3597357" - - subsystem: - - "Valine, leucine, and isoleucine metabolism" - - confidence_score: 0 - !!omap - id: "MAR03753" - name: "(S)-3-Hydroxyisobutyryl-CoA hydro-lyase" @@ -73886,7 +73515,7 @@ - gene_reaction_rule: "hach-1" - rxnNotes: "" - eccodes: "3.1.2.4" - - references: "PMID:11580916;PMID:8188708" + - references: "PMID:11580916;PMID:8188708;PMID:8824301" - subsystem: - "Valine, leucine, and isoleucine metabolism" - confidence_score: 0 @@ -73927,42 +73556,6 @@ - subsystem: - "Valine, leucine, and isoleucine metabolism" - confidence_score: 0 - - !!omap - - id: "MAR03767" - - name: "4-methyl-2-oxopentanoate:NAD+ oxidoreductase (CoA-mehtylpropanoylating)" - - metabolites: !!omap - - MAM01013m: -1 - - MAM01596m: 1 - - MAM01597m: -1 - - MAM02189m: 1 - - MAM02552m: -1 - - MAM02553m: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "bckd-1A and bckd-1B" - - rxnNotes: "" - - eccodes: "1.2.1.25" - - references: "" - - subsystem: - - "Valine, leucine, and isoleucine metabolism" - - confidence_score: 0 - - !!omap - - id: "MAR03769" - - name: "3-methylbutanoyl-CoA:electron-transfer flavoprotein 2,3-oxidoreductase" - - metabolites: !!omap - - MAM00826m: -1 - - MAM02189m: 1 - - MAM03102m: -1 - - MAM03103m: 1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "ivd-1" - - rxnNotes: "" - - eccodes: "1.3.8.4" - - references: "PMID:3597357;PMID:9214289" - - subsystem: - - "Valine, leucine, and isoleucine metabolism" - - confidence_score: 0 - !!omap - id: "MAR03773" - name: "3-Methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)" @@ -74018,23 +73611,6 @@ - subsystem: - "Valine, leucine, and isoleucine metabolism" - confidence_score: 0 - - !!omap - - id: "MAR03783" - - name: "(S)-2-methylbutanoyl-CoA:acceptor 2,3-oxidoreductase" - - metabolites: !!omap - - MAM00663m: -1 - - MAM02999m: 1 - - MAM03102m: 1 - - MAM03103m: -1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "acdh-1 or acdh-3 or acdh-4" - - rxnNotes: "" - - eccodes: "1.3.8.1;1.3.99.12" - - references: "PMID:6401712" - - subsystem: - - "Valine, leucine, and isoleucine metabolism" - - confidence_score: 0 - !!omap - id: "MAR03785" - name: "(2S,3S)-3-Hydroxy-2-methylbutanoyl-CoA hydro-liase" @@ -77311,63 +76887,6 @@ - subsystem: - "Protein assembly" - confidence_score: 0 - - !!omap - - id: "MAR05173" - - name: "" - - metabolites: !!omap - - MAM01285c: 1404 - - MAM01371c: -1404 - - MAM02006c: -28 - - MAM02039c: 1863 - - MAM02040c: -1405 - - MAM02335c: -31 - - MAM02340c: -19 - - MAM02341c: -19 - - MAM02342c: -27 - - MAM02351c: -19 - - MAM02376c: -16 - - MAM02377c: -34 - - MAM02380c: -13 - - MAM02401c: -29 - - MAM02404c: -47 - - MAM02405c: -33 - - MAM02408c: -15 - - MAM02412c: -22 - - MAM02415c: -20 - - MAM02416c: -37 - - MAM02419c: -18 - - MAM02421c: -14 - - MAM02423c: -27 - - MAM02751c: 1404 - - MAM02757c: 1 - - MAM03063c: 31 - - MAM03064c: 19 - - MAM03065c: 19 - - MAM03066c: 27 - - MAM03067c: 19 - - MAM03068c: 16 - - MAM03069c: 34 - - MAM03070c: 28 - - MAM03071c: 13 - - MAM03072c: 29 - - MAM03073c: 47 - - MAM03074c: 33 - - MAM03075c: 15 - - MAM03076c: 22 - - MAM03077c: 20 - - MAM03078c: 37 - - MAM03079c: 18 - - MAM03081c: 14 - - MAM03082c: 27 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Protein assembly" - - confidence_score: 0 - !!omap - id: "MAR05174" - name: "" @@ -78669,44 +78188,6 @@ - subsystem: - "Protein degradation" - confidence_score: 0 - - !!omap - - id: "MAR05289" - - name: "" - - metabolites: !!omap - - MAM01285l: 467 - - MAM01307l: 31 - - MAM01365l: 19 - - MAM01369l: 19 - - MAM01370l: 27 - - MAM01371l: -467 - - MAM01628l: 19 - - MAM01974l: 34 - - MAM01975l: 16 - - MAM01986l: 28 - - MAM02039l: 476 - - MAM02040l: -934 - - MAM02125l: 13 - - MAM02184l: 29 - - MAM02360l: 47 - - MAM02426l: 33 - - MAM02471l: 15 - - MAM02724l: 22 - - MAM02751l: 467 - - MAM02757l: -1 - - MAM02770l: 20 - - MAM02896l: 37 - - MAM02993l: 18 - - MAM03101l: 14 - - MAM03135l: 27 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "C32B5.7 or K02E7.10 or R09F10.1 or Y113G7B.15 or Y40H7A.10 or Y51A2D.1 or Y71H2AM.25 or Y71H2AR.2 or asp-17 or asp-4 or cpl-1 or cpr-5 or cpz-1 or ctsa-1.1 or ctsa-1.2 or lgmn-1 or tag-196" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Protein degradation" - - confidence_score: 0 - !!omap - id: "MAR05290" - name: "" @@ -79291,16 +78772,16 @@ - id: "MAR04145" - name: "acetyl-CoA:oxaloacetate C-acetyltransferase (thioester-hydrolysing)" - metabolites: !!omap - - MAM01261m: 1 - - MAM01587m: -1 - - MAM01597m: -1 - - MAM02039m: -1 - - MAM02040m: 1 - - MAM02633m: 1 - - lower_bound: -1000 + - MAM01261m: -1 + - MAM01587m: 1 + - MAM01597m: 1 + - MAM02039m: 1 + - MAM02040m: -1 + - MAM02633m: -1 + - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "cts-1" - - rxnNotes: "" + - rxnNotes: "Essentials of Medical Biochemistry: With Clinical Cases (2011) page 130, ISBN:978008091688" - eccodes: "2.3.3.1;2.3.3.3" - references: "PMID:12549038" - subsystem: @@ -79516,11 +78997,11 @@ - id: "MAR07704" - name: "Glyoxylate:oxygen oxidoreductase" - metabolites: !!omap + - MAM01802x: -1 + - MAM01803x: 1 - MAM02007x: -1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - - MAM02630x: -1 - MAM02661x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -79535,10 +79016,10 @@ - id: "MAR07706" - name: "glycolate:oxygen 2-oxidoreductase" - metabolites: !!omap + - MAM01802x: -1 + - MAM01803x: 1 - MAM01998x: -1 - MAM02007x: 1 - - MAM02041x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "F41E6.5" @@ -79548,23 +79029,6 @@ - subsystem: - "Tricarboxylic acid cycle and glyoxylate/dicarboxylate metabolism" - confidence_score: 0 - - !!omap - - id: "MAR08743" - - name: "succinate:FAD oxidoreductase" - - metabolites: !!omap - - MAM01802m: 1 - - MAM01803m: -1 - - MAM01862m: -1 - - MAM02943m: 1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "(sdha-1 or sdha-2) and mev-1 and sdhb-1 and sdhd-1" - - rxnNotes: "" - - eccodes: "1.3.5.1" - - references: "" - - subsystem: - - "Tricarboxylic acid cycle and glyoxylate/dicarboxylate metabolism" - - confidence_score: 0 - !!omap - id: "MAR08773" - name: "L-xylulose 1-phosphate glycolaldehyde-lyase (glycerone-phosphate-forming)" @@ -79844,7 +79308,7 @@ - MAM03103m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(gas-1 or nduf-2.2) and C16A3.5 and C18E9.4 and C25H3.9 and C33A12.1 and C34B2.8 and D2030.4 and F42G8.10 and F44G4.2 and F45H10.3 and F53F4.10 and F59C6.5 and T20H4.5 and Y51H1A.3 and Y54F10AM.5 and Y56A3A.19 and Y63D3A.7 and Y71H2AM.4 and Y94H6A.8 and lpd-5 and nduf-5 and nduf-6 and nduf-7 and nduf-9 and nuo-1 and nuo-2 and nuo-3 and nuo-4 and nuo-5 and nuo-6" + - gene_reaction_rule: "(gas-1 or nduf-2.2) and C16A3.5 and lpd-5 and ndab-1 and ndua-12 and ndua-13 and ndua-2 and ndua-5 and ndua-7 and ndua-8 and ndub-10 and ndub-11 and ndub-2 and ndub-3 and ndub-5 and ndub-7 and ndub-8 and nduc-2 and nduf-5 and nduf-6 and nduf-7 and nduf-9 and ndus-8 and nduv-2 and nuo-1 and nuo-2 and nuo-3 and nuo-4 and nuo-5 and nuo-6" - rxnNotes: "" - eccodes: "1.6.5.3" - references: "PMID:27626371;PMID:12611891" @@ -79986,9 +79450,9 @@ - id: "MAR08415" - name: "superoxide:superoxide oxidoreductase" - metabolites: !!omap + - MAM01802x: 1 + - MAM01803x: 1 - MAM02039x: -2 - - MAM02041x: 1 - - MAM02630x: 1 - MAM02631x: -2 - lower_bound: 0 - upper_bound: 1000 @@ -82548,7 +82012,7 @@ - MAM02130c: 1 - MAM02554c: 1 - MAM02555c: -1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "fasn-1" - rxnNotes: "" @@ -82662,37 +82126,14 @@ - subsystem: - "Fatty acid biosynthesis (even-chain)" - confidence_score: 0 - - !!omap - - id: "MAR04156" - - name: "acetyl-CoA:carbon-dioxide ligase (ADP-forming)" - - metabolites: !!omap - - MAM01261c: -1 - - MAM01285c: 1 - - MAM01371c: -1 - - MAM02039c: 1 - - MAM02046c: -1 - - MAM02444c: 1 - - MAM02751c: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "pod-2" - - rxnNotes: "" - - eccodes: "6.4.1.2" - - references: "PMID:7732023;PMID:16854592;PMID:18455495;PMID:10677481;PMID:16721829;PMID:17126822;PMID:235695;PMID:24055;PMID:6116153;PMID:6116159;PMID:6116163;PMID:6138355;PMID:7732023;PMID:9099716" - - subsystem: - - "Fatty acid biosynthesis (even-chain)" - - confidence_score: 0 - !!omap - id: "MAR04295" - name: "acetyl-CoA:carbon-dioxide ligase (ADP-forming)" - metabolites: !!omap - MAM01261m: -1 - - MAM01285m: 1 - - MAM01371m: -1 - - MAM02039m: 1 - - MAM02046m: -1 + - MAM01357m: 1 + - MAM01422m: -1 - MAM02444m: 1 - - MAM02751m: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "pod-2" @@ -84677,7 +84118,7 @@ - MAM02444c: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "C50D2.9 or fasn-1" + - gene_reaction_rule: "fasn-1 or mcat-1" - rxnNotes: "" - eccodes: "2.3.1.85;2.3.1.39" - references: "PMID:11750882;PMID:12882974;PMID:4452359;PMID:6137188;PMID:7567999;PMID:7834997;PMID:8962082" @@ -85711,7 +85152,7 @@ - name: "" - metabolites: !!omap - MAM00121c: -1 - - MAM00902c: 1 + - MAM00853c: 1 - MAM01596c: 1 - MAM01597c: 1 - MAM02039c: -1 @@ -85730,7 +85171,7 @@ - name: "" - metabolites: !!omap - MAM00718c: 1 - - MAM00902c: -1 + - MAM00853c: -1 - MAM02039c: -1 - MAM02554c: 1 - MAM02555c: -1 @@ -85803,8 +85244,8 @@ - metabolites: !!omap - MAM00113x: -1 - MAM01664x: 1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -86833,7 +86274,7 @@ - gene_reaction_rule: "art-1" - rxnNotes: "" - eccodes: "1.3.1.93" - - references: "PMID:10970790;PMID:10970790" + - references: "PMID:10970790;PMID:10970790;PMID:10970790" - subsystem: - "Omega-6 fatty acid metabolism" - confidence_score: 0 @@ -86862,8 +86303,8 @@ - name: "" - metabolites: !!omap - MAM00110x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03028x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -87196,7 +86637,7 @@ - MAM03034m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "1.3.1.34" - references: "PMID:10407780;PMID:7775433" @@ -87330,7 +86771,7 @@ - MAM01597m: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:10407780;PMID:7775433" @@ -87365,7 +86806,7 @@ - MAM02555m: -1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "1.3.1.34" - references: "PMID:10407780;PMID:7775433" @@ -87393,8 +86834,8 @@ - metabolites: !!omap - MAM00682x: 1 - MAM01364x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -87430,7 +86871,7 @@ - MAM03034x: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "1.3.1.34" - references: "PMID:10407780;PMID:7775433" @@ -87491,9 +86932,9 @@ - name: "" - metabolites: !!omap - MAM00073x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM01934x: -1 - - MAM02041x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -87560,8 +87001,8 @@ - metabolites: !!omap - MAM00072x: 1 - MAM00091x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -87582,7 +87023,7 @@ - MAM02555x: -1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "1.3.1.34" - references: "PMID:10407780;PMID:7775433" @@ -87679,7 +87120,7 @@ - upper_bound: 1000 - gene_reaction_rule: "cyp-13A1 or cyp-13A10 or cyp-13A11 or cyp-13A2 or cyp-13A3 or cyp-13A4 or cyp-13A5 or cyp-13A6 or cyp-13A7 or cyp-13A8 or cyp-33A1 or cyp-33B1 or cyp-33C1 or cyp-33C11 or cyp-33C2 or cyp-33C3 or cyp-33C4 or cyp-33C5 or cyp-33C6 or cyp-33C7 or cyp-33C8 or cyp-33C9 or cyp-33D1 or cyp-33D3" - rxnNotes: "" - - eccodes: "1.14.14.1" + - eccodes: "1.14.14.1;1.14.15.3" - references: "" - subsystem: - "Arachidonic acid metabolism" @@ -88731,7 +88172,7 @@ - MAM02759c: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -88757,7 +88198,7 @@ - MAM02759c: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -88782,7 +88223,7 @@ - MAM02759c: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -88807,7 +88248,7 @@ - MAM02759c: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -88833,7 +88274,7 @@ - MAM02759c: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -88859,7 +88300,7 @@ - MAM02759c: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -89792,8 +89233,8 @@ - metabolites: !!omap - MAM01119x: 1 - MAM01120x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -89881,7 +89322,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:7649996" @@ -90235,8 +89676,8 @@ - metabolites: !!omap - MAM01121x: 1 - MAM01122x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -90324,7 +89765,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:7649996" @@ -90685,8 +90126,8 @@ - metabolites: !!omap - MAM00026x: 1 - MAM00582x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -90774,7 +90215,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:12054595" @@ -90933,8 +90374,8 @@ - metabolites: !!omap - MAM00258x: -1 - MAM01037x: 1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -91022,7 +90463,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:9862787;PMID:11368003" @@ -91233,8 +90674,8 @@ - metabolites: !!omap - MAM00027x: 1 - MAM00587x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -91318,8 +90759,8 @@ - name: "" - metabolites: !!omap - MAM00423x: 1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02650x: -1 - lower_bound: 0 - upper_bound: 1000 @@ -91341,7 +90782,7 @@ - MAM02555x: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "1.3.1.34" - references: "PMID:12054595" @@ -91439,9 +90880,9 @@ - name: "" - metabolites: !!omap - MAM00015x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: -3 - - MAM02041x: 1 - - MAM02630x: -1 - MAM02652x: -1 - lower_bound: 0 - upper_bound: 1000 @@ -92874,7 +92315,7 @@ - gene_reaction_rule: "cpt-1" - rxnNotes: "" - eccodes: "2.3.1.21" - - references: "" + - references: "PMID:12828998;PMID:9498103;PMID:3955080" - subsystem: - "Carnitine shuttle (cytosolic)" - confidence_score: 0 @@ -98095,7 +97536,7 @@ - gene_reaction_rule: "gpdh-3" - rxnNotes: "" - eccodes: "1.1.5.3" - - references: "PMID:7821823;PMID:8687421;PMID:8163052" + - references: "PMID:11955283;PMID:2115809;PMID:2923620;PMID:3338458;PMID:340460;PMID:8401296;PMID:8549872;PMID:8579375;PMID:9171333;PMID:9244403;PMID:9559543;PMID:7821823;PMID:8687421;PMID:8163052" - subsystem: - "Acylglycerides metabolism" - confidence_score: 0 @@ -98392,12 +97833,12 @@ - MAM00317x: -1 - MAM01261x: 12 - MAM01597x: -11 + - MAM01802x: -7 + - MAM01803x: 7 - MAM02039x: 11 - MAM02040x: -11 - - MAM02041x: 7 - MAM02552x: -11 - MAM02553x: 11 - - MAM02630x: -7 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "" @@ -98414,12 +97855,12 @@ - MAM00134x: -1 - MAM01261x: 12 - MAM01597x: -11 + - MAM01802x: -6 + - MAM01803x: 6 - MAM02039x: 11 - MAM02040x: -11 - - MAM02041x: 6 - MAM02552x: -11 - MAM02553x: 11 - - MAM02630x: -6 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "" @@ -98436,12 +97877,12 @@ - MAM00131x: -1 - MAM01261x: 12 - MAM01597x: -11 + - MAM01802x: -11 + - MAM01803x: 11 - MAM02039x: 3 - MAM02040x: -11 - - MAM02041x: 11 - MAM02552x: -11 - MAM02553x: 11 - - MAM02630x: -11 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "" @@ -98456,9 +97897,9 @@ - name: "" - metabolites: !!omap - MAM00049x: 1 - - MAM02041x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02110x: -1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -98524,8 +97965,8 @@ - name: "" - metabolites: !!omap - MAM00064x: 1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02971x: -1 - lower_bound: 0 - upper_bound: 1000 @@ -98593,8 +98034,8 @@ - metabolites: !!omap - MAM00040x: 1 - MAM01725x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -98661,8 +98102,8 @@ - metabolites: !!omap - MAM00043x: 1 - MAM01773x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -98728,8 +98169,8 @@ - name: "" - metabolites: !!omap - MAM00057x: 1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02941x: -1 - lower_bound: 0 - upper_bound: 1000 @@ -98796,8 +98237,8 @@ - name: "" - metabolites: !!omap - MAM00051x: 1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02678x: -1 - lower_bound: 0 - upper_bound: 1000 @@ -98864,9 +98305,9 @@ - name: "" - metabolites: !!omap - MAM00066x: 1 - - MAM02041x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02495x: -1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -98932,9 +98373,9 @@ - name: "" - metabolites: !!omap - MAM00042x: 1 - - MAM02041x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02345x: -1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -99001,8 +98442,8 @@ - metabolites: !!omap - MAM00039x: 1 - MAM01650x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -99068,8 +98509,8 @@ - name: "" - metabolites: !!omap - MAM00059x: 1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02644x: -1 - lower_bound: 0 - upper_bound: 1000 @@ -99136,9 +98577,9 @@ - name: "" - metabolites: !!omap - MAM00053x: 1 - - MAM02041x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02122x: -1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -99205,8 +98646,8 @@ - metabolites: !!omap - MAM01412x: -1 - MAM01622x: 1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -99271,12 +98712,12 @@ - metabolites: !!omap - MAM01261x: 10 - MAM01597x: -10 + - MAM01802x: -10 + - MAM01803x: 10 - MAM02039x: 10 - MAM02040x: -10 - - MAM02041x: 10 - MAM02552x: -10 - MAM02553x: 10 - - MAM02630x: -10 - MAM02774x: 1 - MAM03047x: -1 - lower_bound: 0 @@ -99292,9 +98733,9 @@ - id: "MAR03326" - name: "" - metabolites: !!omap - - MAM02041x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02112x: -1 - - MAM02630x: -1 - MAM03016x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -99361,8 +98802,8 @@ - name: "" - metabolites: !!omap - MAM00025x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03015x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -99429,8 +98870,8 @@ - name: "" - metabolites: !!omap - MAM00016x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03013x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -99497,8 +98938,8 @@ - name: "" - metabolites: !!omap - MAM00007x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03012x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -99564,8 +99005,8 @@ - id: "MAR03342" - name: "" - metabolites: !!omap - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02647x: -1 - MAM03025x: 1 - lower_bound: 0 @@ -99633,8 +99074,8 @@ - name: "" - metabolites: !!omap - MAM01191x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03019x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -99701,8 +99142,8 @@ - name: "" - metabolites: !!omap - MAM01141x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03022x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -99779,23 +99220,6 @@ - subsystem: - "Beta oxidation of unsaturated fatty acids (n-9) (peroxisomal)" - confidence_score: 0 - - !!omap - - id: "MAR03364" - - name: "" - - metabolites: !!omap - - MAM02041x: 1 - - MAM02630x: -1 - - MAM02677x: -1 - - MAM03020x: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - - rxnNotes: "" - - eccodes: "1.3.3.6" - - references: "PMID:1047780;PMID:8973539;PMID:11135616" - - subsystem: - - "Beta oxidation of unsaturated fatty acids (n-9) (peroxisomal)" - - confidence_score: 0 - !!omap - id: "MAR03365" - name: "" @@ -99847,23 +99271,6 @@ - subsystem: - "Beta oxidation of unsaturated fatty acids (n-9) (peroxisomal)" - confidence_score: 0 - - !!omap - - id: "MAR03369" - - name: "" - - metabolites: !!omap - - MAM00118x: -1 - - MAM02041x: 1 - - MAM02630x: -1 - - MAM03023x: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - - rxnNotes: "" - - eccodes: "1.3.3.6" - - references: "PMID:1047780;PMID:8973539;PMID:11135616" - - subsystem: - - "Beta oxidation of unsaturated fatty acids (n-9) (peroxisomal)" - - confidence_score: 0 - !!omap - id: "MAR03370" - name: "" @@ -100015,8 +99422,8 @@ - name: "" - metabolites: !!omap - MAM00078x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03027x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -100084,8 +99491,8 @@ - metabolites: !!omap - MAM00090x: 1 - MAM00948x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -100167,8 +99574,8 @@ - metabolites: !!omap - MAM00079x: 1 - MAM00080x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" @@ -100237,30 +99644,13 @@ - MAM00933x: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "" + - gene_reaction_rule: "daf-22" - rxnNotes: "" - - eccodes: "" - - references: "" + - eccodes: "1.5.1.10" + - references: "PMID:1703300" - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR03301" - - name: "" - - metabolites: !!omap - - MAM02041x: 1 - - MAM02391x: -1 - - MAM02630x: -1 - - MAM03010x: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - - rxnNotes: "" - - eccodes: "1.3.3.6" - - references: "PMID:8973539;PMID:10407780;PMID:11356167" - - subsystem: - - "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)" - - confidence_score: 0 - !!omap - id: "MAR03302" - name: "" @@ -100312,23 +99702,6 @@ - subsystem: - "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)" - confidence_score: 0 - - !!omap - - id: "MAR03306" - - name: "" - - metabolites: !!omap - - MAM01577x: -1 - - MAM02041x: 1 - - MAM02630x: -1 - - MAM03009x: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - - rxnNotes: "" - - eccodes: "1.3.3.6" - - references: "PMID:8973539;PMID:10407780;PMID:11356167" - - subsystem: - - "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)" - - confidence_score: 0 - !!omap - id: "MAR03307" - name: "" @@ -100380,23 +99753,6 @@ - subsystem: - "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)" - confidence_score: 0 - - !!omap - - id: "MAR03311" - - name: "" - - metabolites: !!omap - - MAM01576x: -1 - - MAM02041x: 1 - - MAM02630x: -1 - - MAM03030x: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - - rxnNotes: "" - - eccodes: "1.3.3.6" - - references: "PMID:8973539;PMID:10407780;PMID:11356167" - - subsystem: - - "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)" - - confidence_score: 0 - !!omap - id: "MAR03312" - name: "" @@ -100541,7 +99897,7 @@ - MAM03035x: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "1.3.1.34" - references: "PMID:7775433;PMID:11356164" @@ -100624,7 +99980,7 @@ - MAM01773m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -100692,7 +100048,7 @@ - MAM02941m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -100760,7 +100116,7 @@ - MAM02678m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -100779,8 +100135,8 @@ - upper_bound: 1000 - gene_reaction_rule: "acdh-10 or acdh-12 or acdh-13 or acdh-8" - rxnNotes: "" - - eccodes: "1.3.8.7;1.3.8.8;1.3.8.9;1.3.99.-" - - references: "PMID:13295225;PMID:1540149" + - eccodes: "1.3.8.7;1.3.8.8;1.3.8.9;1.3.99.-;1.3.99.3" + - references: "PMID:13295225;PMID:1540149;PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265" - subsystem: - "Beta oxidation of even-chain fatty acids (mitochondrial)" - confidence_score: 0 @@ -100828,7 +100184,7 @@ - MAM02495m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:10706581;PMID:1121274;PMID:1679347;PMID:3194209;PMID:6378901;PMID:8241273" @@ -100845,10 +100201,10 @@ - MAM02495m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "acdh-10 or acdh-12 or acdh-13 or acdh-8" + - gene_reaction_rule: "acdh-10 or acdh-12 or acdh-13 or acdh-8 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - rxnNotes: "" - - eccodes: "1.3.8.7;1.3.8.8;1.3.8.9;1.3.99.-" - - references: "PMID:13295225;PMID:1540149" + - eccodes: "1.3.8.7;1.3.8.8;1.3.8.9;1.3.99.-;1.3.3.6" + - references: "PMID:13295225;PMID:1540149;PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265" - subsystem: - "Beta oxidation of even-chain fatty acids (mitochondrial)" - confidence_score: 0 @@ -100896,7 +100252,7 @@ - MAM02345m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:1121274;PMID:1679347;PMID:3194209;PMID:6378901;PMID:8241273;PMID:1550553" @@ -100915,8 +100271,8 @@ - upper_bound: 1000 - gene_reaction_rule: "acdh-10 or acdh-12 or acdh-13 or acdh-8" - rxnNotes: "" - - eccodes: "1.3.8.7;1.3.8.8;1.3.8.9;1.3.99.-" - - references: "PMID:13295225;PMID:1540149" + - eccodes: "1.3.8.7;1.3.8.8;1.3.8.9;1.3.99.-;1.3.3.6" + - references: "PMID:13295225;PMID:1540149;PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265" - subsystem: - "Beta oxidation of even-chain fatty acids (mitochondrial)" - confidence_score: 0 @@ -100931,8 +100287,8 @@ - upper_bound: 1000 - gene_reaction_rule: "(ech-8 or ech-9) and (ech-1.1 or ech-1.2) and ech-6" - rxnNotes: "" - - eccodes: "4.2.1.17" - - references: "PMID:8012501;PMID:8188243;PMID:13295248" + - eccodes: "1.3.3.6;4.2.1.17" + - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265;PMID:8012501;PMID:8188243;PMID:13295248" - subsystem: - "Beta oxidation of even-chain fatty acids (mitochondrial)" - confidence_score: 0 @@ -100964,7 +100320,7 @@ - MAM01650m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:1121274;PMID:1679347;PMID:3194209;PMID:6378901;PMID:8241273;PMID:1550553" @@ -100981,10 +100337,10 @@ - MAM01803m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "acdh-10 or acdh-13 or acdh-8" + - gene_reaction_rule: "acdh-10 or acdh-13 or acdh-8 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - rxnNotes: "" - - eccodes: "1.3.8.7;1.3.99.-" - - references: "PMID:13295225;PMID:3597357" + - eccodes: "1.3.8.7;1.3.99.-;1.3.3.6" + - references: "PMID:13295225;PMID:3597357;PMID:17603022;PMID:1774065;PMID:6240978;PMID:7876265" - subsystem: - "Beta oxidation of even-chain fatty acids (mitochondrial)" - confidence_score: 0 @@ -101032,7 +100388,7 @@ - MAM02644m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:1121274;PMID:1679347;PMID:3194209;PMID:6378901;PMID:8241273;PMID:1550553" @@ -101049,10 +100405,10 @@ - MAM02644m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "acdh-10 or acdh-13 or acdh-8" + - gene_reaction_rule: "acdh-10 or acdh-13 or acdh-8 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - rxnNotes: "" - - eccodes: "1.3.8.7;1.3.99.-" - - references: "PMID:13295225;PMID:3597357" + - eccodes: "1.3.8.7;1.3.99.-;1.3.3.6" + - references: "PMID:17603022;PMID:1774065;PMID:13295225;PMID:3597357;PMID:6240978;PMID:7876265" - subsystem: - "Beta oxidation of even-chain fatty acids (mitochondrial)" - confidence_score: 0 @@ -101100,7 +100456,7 @@ - MAM02122m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:1121274;PMID:1679347;PMID:3194209;PMID:6378901;PMID:8241273;PMID:1550553" @@ -101117,10 +100473,10 @@ - MAM02122m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "acdh-1 or acdh-3 or acdh-4" + - gene_reaction_rule: "acdh-1 or acdh-3 or acdh-4 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - rxnNotes: "" - - eccodes: "1.3.8.5" - - references: "PMID:13295225;PMID:3597357" + - eccodes: "1.3.8.5;1.3.3.6" + - references: "PMID:13295225;PMID:3597357;PMID:17603022;PMID:1774065;PMID:6240978;PMID:7876265" - subsystem: - "Beta oxidation of even-chain fatty acids (mitochondrial)" - confidence_score: 0 @@ -101168,7 +100524,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:10806397;PMID:1121274;PMID:1679347;PMID:1735445;PMID:1979337;PMID:2048733;PMID:3194209;PMID:6378901;PMID:8241273;PMID:1550553" @@ -101190,7 +100546,7 @@ - MAM02553m: 6 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101212,7 +100568,7 @@ - MAM02553m: 8 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101234,7 +100590,7 @@ - MAM02553m: 8 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101256,7 +100612,7 @@ - MAM02553m: 8 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101278,7 +100634,7 @@ - MAM02553m: 8 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101300,7 +100656,7 @@ - MAM02553m: 9 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101322,7 +100678,7 @@ - MAM02553m: 9 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101344,7 +100700,7 @@ - MAM02553m: 9 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101366,7 +100722,7 @@ - MAM02553m: 10 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101388,7 +100744,7 @@ - MAM02553m: 10 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101410,7 +100766,7 @@ - MAM02553m: 10 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101432,7 +100788,7 @@ - MAM02553m: 9 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101454,7 +100810,7 @@ - MAM02553m: 10 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101476,7 +100832,7 @@ - MAM02553m: 10 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101498,7 +100854,7 @@ - MAM02553m: 8 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101520,7 +100876,7 @@ - MAM02553m: 8 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101542,7 +100898,7 @@ - MAM02553m: 9 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101564,7 +100920,7 @@ - MAM02553m: 9 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101586,7 +100942,7 @@ - MAM02553m: 10 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101608,7 +100964,7 @@ - MAM02553m: 10 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101630,7 +100986,7 @@ - MAM02553m: 9 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101652,7 +101008,7 @@ - MAM02553m: 10 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101674,7 +101030,7 @@ - MAM02553m: 10 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or acaa-2 or acdh-10 or acdh-12 or acdh-13 or acdh-8 or ard-1 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17;1.1.1.35;1.1.1.211;1.3.8.7;1.3.8.8;1.3.8.9;2.3.1.16" - references: "" @@ -101742,7 +101098,7 @@ - MAM02612m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -101810,7 +101166,7 @@ - MAM02101m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -101878,7 +101234,7 @@ - MAM02689m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -101946,7 +101302,7 @@ - MAM03050m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -102014,7 +101370,7 @@ - MAM03116m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -102082,7 +101438,7 @@ - MAM02616m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -102150,7 +101506,7 @@ - MAM02107m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -102218,7 +101574,7 @@ - MAM02694m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -102286,7 +101642,7 @@ - MAM02774m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -102400,7 +101756,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -102468,7 +101824,7 @@ - MAM02677m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -102536,7 +101892,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:7923814;PMID:9920399;PMID:9568246" @@ -102604,7 +101960,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:9920399;PMID:9568246;PMID:7923814" @@ -102631,8 +101987,8 @@ - name: "" - metabolites: !!omap - MAM00018x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03014x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -102699,8 +102055,8 @@ - name: "" - metabolites: !!omap - MAM01586x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03024x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -102823,7 +102179,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -102891,7 +102247,7 @@ - MAM02647m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -102959,7 +102315,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -103027,7 +102383,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:7923814;PMID:9920399;PMID:9568246" @@ -103095,7 +102451,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:9920399;PMID:9568246;PMID:7923814" @@ -103178,7 +102534,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:10407780;PMID:9920399;PMID:7923814;PMID:9568246" @@ -103246,7 +102602,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:10407780;PMID:9568246;PMID:7923814;PMID:9920399;PMID:7775433;PMID:10407780" @@ -103314,7 +102670,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "" @@ -103380,7 +102736,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:7923814;PMID:9920399;PMID:10407780;PMID:9568246" @@ -103415,7 +102771,7 @@ - MAM03035m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "1.3.1.34" - references: "PMID:7775433;PMID:11356164" @@ -103447,7 +102803,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:11356170" @@ -103482,7 +102838,7 @@ - MAM02555m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "1.3.1.34" - references: "PMID:11356170" @@ -103533,7 +102889,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:11356170" @@ -103568,7 +102924,7 @@ - MAM02555m: -1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "1.3.1.34" - references: "PMID:11356170" @@ -103619,7 +102975,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:11356170" @@ -103636,7 +102992,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:11356170" @@ -103671,7 +103027,7 @@ - MAM02555m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "1.3.1.34" - references: "PMID:11356170" @@ -103722,7 +103078,7 @@ - MAM01597m: -1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:11356170" @@ -103740,7 +103096,7 @@ - MAM02555m: -1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "1.3.1.34" - references: "PMID:11356170" @@ -103808,7 +103164,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:11356170" @@ -103876,7 +103232,7 @@ - MAM01597m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:10407780;PMID:9819701;PMID:9469587;PMID:10407780;PMID:9819701;PMID:9469587" @@ -103959,7 +103315,7 @@ - MAM02774m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:10407780;PMID:9819701;PMID:9469587;PMID:10407780;PMID:9819701;PMID:9469587" @@ -104027,7 +103383,7 @@ - MAM02180m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acaa-2" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acaa-2 and hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16;1.1.1.211" - references: "PMID:10407780;PMID:9819701;PMID:9469587;PMID:10407780;PMID:9819701;PMID:9469587" @@ -104303,40 +103659,6 @@ - subsystem: - "Terpenoid backbone biosynthesis" - confidence_score: 0 - - !!omap - - id: "MAR01644" - - name: "(24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA hydro-lyase [(24E)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA-forming]" - - metabolites: !!omap - - MAM00036m: 1 - - MAM00749m: -1 - - MAM02040m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "(ech-8 or ech-9) and dhs-28" - - rxnNotes: "" - - eccodes: "4.2.1.107" - - references: "PMID:10709654" - - subsystem: - - "Steroid metabolism" - - confidence_score: 0 - - !!omap - - id: "MAR01651" - - name: "(24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA:NAD+ oxidoreductase" - - metabolites: !!omap - - MAM00036m: -1 - - MAM00748m: 1 - - MAM02039m: 1 - - MAM02552m: -1 - - MAM02553m: 1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0272.3 and ard-1" - - rxnNotes: "" - - eccodes: "1.1.1.35;1.1.1.211" - - references: "PMID:10709654" - - subsystem: - - "Steroid metabolism" - - confidence_score: 0 - !!omap - id: "MAR01920" - name: "Cholesterol-sulfate sulfohydrolase" @@ -104447,8 +103769,8 @@ - id: "MAR02003" - name: "3alpha-hydroxy-5alpha-pregnan-20-one:NADP+ 3-oxidoreductase (A-specific)" - metabolites: !!omap - - MAM00759c: -1 - MAM01072c: 1 + - MAM01314c: -1 - MAM02039c: 1 - MAM02554c: -1 - MAM02555c: 1 @@ -112703,23 +112025,6 @@ - subsystem: - "Glycerophospholipid metabolism" - confidence_score: 0 - - !!omap - - id: "MAR00483" - - name: "sn-glycerol 3-phosphate:quinone oxidoreductase" - - metabolites: !!omap - - MAM01690c: 1 - - MAM02914c: -1 - - MAM03102m: 1 - - MAM03103m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "gpdh-3" - - rxnNotes: "" - - eccodes: "1.1.5.3" - - references: "PMID:11955283;PMID:2115809;PMID:2923620;PMID:3338458;PMID:340460;PMID:8401296;PMID:8549872;PMID:8579375;PMID:9171333;PMID:9244403;PMID:9559543" - - subsystem: - - "Glycerophospholipid metabolism" - - confidence_score: 0 - !!omap - id: "MAR00482" - name: "sn-Glycerol-3-phosphate:(acceptor) 2-oxidoreductase" @@ -112733,7 +112038,7 @@ - gene_reaction_rule: "gpdh-3" - rxnNotes: "" - eccodes: "1.1.5.3" - - references: "" + - references: "PMID:11955283;PMID:2115809;PMID:2923620;PMID:3338458;PMID:340460;PMID:8401296;PMID:8549872;PMID:8579375;PMID:9171333;PMID:9244403;PMID:9559543" - subsystem: - "Glycerophospholipid metabolism" - confidence_score: 0 @@ -116905,112 +116210,6 @@ - subsystem: - "Ether lipid metabolism" - confidence_score: 0 - - !!omap - - id: "MAR00024" - - name: "" - - metabolites: !!omap - - MAM01268n: 1 - - MAM01816n: -1 - - MAM02757n: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "(gei-8 and hda-2) or (gei-8 and sin-3) or (gei-8 and hda-2 and sin-3) or cbp-1 or nhr-2 or nhr-23 or nhr-85 or sex-1 or sin-3 or tgs-1" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Isolated" - - confidence_score: 0 - - !!omap - - id: "MAR00025" - - name: "" - - metabolites: !!omap - - MAM01268c: 1 - - MAM01268n: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acs-20 or hmgs-1 or men-1 or rgl-1 or scl-20 or scl-3 or ssu-1 or trxr-1" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR00026" - - name: "" - - metabolites: !!omap - - MAM01268c: -1 - - MAM01268r: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "fat-4 or hmgr-1 or ugt-61" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR00027" - - name: "" - - metabolites: !!omap - - MAM01268c: -1 - - MAM01268m: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acdh-10 or acdh-8 or acs-13 or cpt-1 or cpt-2 or hmgs-1" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR00028" - - name: "" - - metabolites: !!omap - - MAM01268c: -1 - - MAM01268x: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR00029" - - name: "" - - metabolites: !!omap - - MAM01268c: -1 - - MAM01268e: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "abt-2 or pgp-1 or pgp-9 or scav-2" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR00030" - - name: "" - - metabolites: !!omap - - MAM01268c: -1 - - MAM01268n: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "ZC513.2 or abt-2 or acdh-10 or acdh-8 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acs-13 or acs-20 or atgl-1 or cpt-1 or cpt-2 or dsc-4 or ech-8 or ech-9 or fasn-1 or fat-3 or fat-4 or fat-5 or fat-6 or fat-7 or gpdh-2 or hmgs-1 or mboa-2 or pdhk-2 or pgp-1 or pgp-9 or pod-2 or sbp-1 or scav-2 or ssu-1 or ugt-61" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:12505311;PMID:14999402;PMID:19710929;PMID:17604218;PMID:16476485;PMID:18288277;PMID:16503871;PMID:10529898;PMID:11330046" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR07200" - name: "" @@ -120639,38 +119838,6 @@ - subsystem: - "Bile acid biosynthesis" - confidence_score: 0 - - !!omap - - id: "MAR01635" - - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA 25-epimerase" - - metabolites: !!omap - - MAM00616m: -1 - - MAM00618m: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "C24A3.4 or ZK892.4" - - rxnNotes: "" - - eccodes: "5.1.99.4" - - references: "PMID:11864182;PMID:11060344;PMID:10709654;PMID:11060344;PMID:11060344" - - subsystem: - - "Bile acid biosynthesis" - - confidence_score: 0 - - !!omap - - id: "MAR01637" - - name: "" - - metabolites: !!omap - - MAM00618m: -1 - - MAM00749m: 1 - - MAM02041m: 1 - - MAM02630m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - - rxnNotes: "" - - eccodes: "1.3.3.6;1.17.99.-" - - references: "PMID:10709654" - - subsystem: - - "Bile acid biosynthesis" - - confidence_score: 0 - !!omap - id: "MAR01638" - name: "" @@ -120686,23 +119853,6 @@ - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - rxnNotes: "" - eccodes: "1.3.3.6;1.17.99.-" - - references: "" - - subsystem: - - "Bile acid biosynthesis" - - confidence_score: 0 - - !!omap - - id: "MAR01639" - - name: "" - - metabolites: !!omap - - MAM00618x: -1 - - MAM00749x: 1 - - MAM02041x: 1 - - MAM02630x: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - - rxnNotes: "" - - eccodes: "1.3.3.6;1.17.99.-" - references: "PMID:11356170;PMID:8943006" - subsystem: - "Bile acid biosynthesis" @@ -120719,7 +119869,7 @@ - gene_reaction_rule: "(ech-8 or ech-9) and dhs-28" - rxnNotes: "" - eccodes: "4.2.1.107" - - references: "PMID:8902629" + - references: "PMID:8902629;PMID:10709654" - subsystem: - "Bile acid biosynthesis" - confidence_score: 0 @@ -120737,7 +119887,7 @@ - gene_reaction_rule: "(ech-8 or ech-9) and dhs-28" - rxnNotes: "" - eccodes: "1.1.1.35;1.1.1.211" - - references: "PMID:11330072" + - references: "PMID:11330072;PMID:10709654" - subsystem: - "Bile acid biosynthesis" - confidence_score: 0 @@ -120758,38 +119908,6 @@ - subsystem: - "Bile acid biosynthesis" - confidence_score: 0 - - !!omap - - id: "MAR01653" - - name: "3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA:propanoyl-CoA C-acyltransferase" - - metabolites: !!omap - - MAM00748m: -1 - - MAM01514m: 1 - - MAM01597m: -1 - - MAM02774m: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "daf-22 or hum-2" - - rxnNotes: "" - - eccodes: "2.3.1.176;2.3.1.16" - - references: "PMID:1121274;PMID:11356164;PMID:6378901" - - subsystem: - - "Bile acid biosynthesis" - - confidence_score: 0 - - !!omap - - id: "MAR01656" - - name: "" - - metabolites: !!omap - - MAM01514c: -1 - - MAM01514x: 1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:10884298;PMID:6469982" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR01659" - name: "" @@ -120806,7 +119924,7 @@ - gene_reaction_rule: "Y54G2A.18 or cmk-1 or idhg-1 or idhg-2 or pmp-4 or spk-1" - rxnNotes: "" - eccodes: "" - - references: "PMID:18619829" + - references: "PMID:18619829;PMID:6469982" - subsystem: - "Bile acid biosynthesis" - confidence_score: 0 @@ -120828,24 +119946,6 @@ - subsystem: - "Bile acid biosynthesis" - confidence_score: 0 - - !!omap - - id: "MAR01662" - - name: "choloyl-CoA hydrolase" - - metabolites: !!omap - - MAM01445m: 1 - - MAM01514m: -1 - - MAM01597m: 1 - - MAM02039m: 1 - - MAM02040m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "C37H5.13 or F25E2.3" - - rxnNotes: "" - - eccodes: "3.1.2.27" - - references: "PMID:11454857;PMID:10944470;PMID:10817395;PMID:11673457" - - subsystem: - - "Bile acid biosynthesis" - - confidence_score: 0 - !!omap - id: "MAR01663" - name: "choloyl-CoA hydrolase" @@ -121163,7 +120263,7 @@ - MAM00758m: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "B0303.3 or acaa-2 or hum-2" + - gene_reaction_rule: "acaa-2 or hadb-1 or hum-2" - rxnNotes: "" - eccodes: "2.3.1.176;2.3.1.16" - references: "PMID:12543708" @@ -121261,8 +120361,8 @@ - metabolites: !!omap - MAM00617x: -1 - MAM00755x: 1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acox-1.1" @@ -121281,10 +120381,10 @@ - MAM02040x: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-8 or ech-9) and dhs-28" + - gene_reaction_rule: "dhs-28 or ech-8 or ech-9" - rxnNotes: "" - eccodes: "4.2.1.107" - - references: "PMID:8902629" + - references: "PMID:8902629;PMID:19357427" - subsystem: - "Bile acid biosynthesis" - confidence_score: 0 @@ -121454,7 +120554,7 @@ - gene_reaction_rule: "ssu-1" - rxnNotes: "" - eccodes: "2.8.2.14" - - references: "" + - references: "PMID:19131563;PMID:16949895" - subsystem: - "Bile acid biosynthesis" - confidence_score: 0 @@ -122577,14 +121677,14 @@ - id: "MAR01845" - name: "" - metabolites: !!omap - - MAM01334x: -1 - - MAM01371x: 1 - - MAM01986x: 1 - - MAM02000x: -1 - - MAM02039x: -1 - - MAM02402x: 1 - - MAM02759x: -1 - - lower_bound: -1000 + - MAM01334x: 1 + - MAM01371x: -1 + - MAM01986x: -1 + - MAM02000x: 1 + - MAM02039x: 1 + - MAM02402x: -1 + - MAM02759x: 1 + - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "T05E7.1" - rxnNotes: "" @@ -127570,7 +126670,7 @@ - eccodes: "6.3.4.14" - references: "" - subsystem: - - "Biotin metabolism" + - "Fatty acid biosynthesis (even-chain)" - confidence_score: 0 - !!omap - id: "MAR07673" @@ -127587,7 +126687,7 @@ - eccodes: "6.4.1.2" - references: "" - subsystem: - - "Biotin metabolism" + - "Fatty acid biosynthesis (even-chain)" - confidence_score: 0 - !!omap - id: "MAR04160" @@ -130601,7 +129701,7 @@ - MAM02774m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -130627,7 +129727,7 @@ - MAM02759m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or F53C11.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or decr-1.2 or decr-1.3 or dhs-28 or ech-1.1 or ech-1.2 or ech-4 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or decr-1.1 or decr-1.2 or decr-1.3 or dhs-28 or ech-1.1 or ech-1.2 or ech-4 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.1.34;1.3.3.6;2.3.1.16;3.1.2.2;3.1.2.27;4.2.1.17;5.1.99.4;5.3.3.8;6.2.1.-" - references: "" @@ -130675,7 +129775,7 @@ - MAM02759m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or F53C11.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or decr-1.2 or decr-1.3 or dhs-28 or ech-1.1 or ech-1.2 or ech-4 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or decr-1.1 or decr-1.2 or decr-1.3 or dhs-28 or ech-1.1 or ech-1.2 or ech-4 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.1.34;1.3.3.6;2.3.1.16;3.1.2.2;3.1.2.27;4.2.1.17;5.1.99.4;5.3.3.8;6.2.1.-" - references: "" @@ -130701,7 +129801,7 @@ - MAM02774m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -130751,7 +129851,7 @@ - MAM02759m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or F53C11.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or decr-1.2 or decr-1.3 or dhs-28 or ech-1.1 or ech-1.2 or ech-4 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or decr-1.1 or decr-1.2 or decr-1.3 or dhs-28 or ech-1.1 or ech-1.2 or ech-4 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.1.34;1.3.3.6;2.3.1.16;3.1.2.2;3.1.2.27;4.2.1.17;5.1.99.4;5.3.3.8;6.2.1.-" - references: "" @@ -130775,7 +129875,7 @@ - MAM02774m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -130799,7 +129899,7 @@ - MAM02759m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or F53C11.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or decr-1.2 or decr-1.3 or dhs-28 or ech-1.1 or ech-1.2 or ech-4 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or decr-1.1 or decr-1.2 or decr-1.3 or dhs-28 or ech-1.1 or ech-1.2 or ech-4 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.1.34;1.3.3.6;2.3.1.16;3.1.2.2;3.1.2.27;4.2.1.17;5.1.99.4;5.3.3.8;6.2.1.-" - references: "" @@ -130825,7 +129925,7 @@ - MAM02774m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -130974,7 +130074,7 @@ - MAM02759m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -131000,7 +130100,7 @@ - MAM02774m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -131026,7 +130126,7 @@ - MAM02759m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -131095,7 +130195,7 @@ - MAM02759m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -131121,7 +130221,7 @@ - MAM02774m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6" + - gene_reaction_rule: "B0272.3 or C24A3.4 or C37H5.13 or F25E2.3 or T05E7.1 or W09D6.1 or ZK892.4 or acaa-2 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or acs-1 or acs-11 or acs-2 or acs-20 or acs-21 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-6 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35;1.3.3.6;2.3.1.154;2.3.1.16;3.1.2.2;4.2.1.17;5.1.99.4;6.2.1.-" - references: "" @@ -133421,9 +132521,9 @@ - id: "MAR03984" - name: "hydrogen-peroxide:hydrogen-peroxide oxidoreductase" - metabolites: !!omap + - MAM01802x: 1 + - MAM01803x: -2 - MAM02040x: 2 - - MAM02041x: -2 - - MAM02630x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "ctl-1 or ctl-2 or ctl-3" @@ -133431,7 +132531,7 @@ - eccodes: "1.11.1.6" - references: "PMID:12054464;PMID:1657986" - subsystem: - - "Miscellaneous" + - "Glyoxylate and dicarboxylate metabolism" - confidence_score: 0 - !!omap - id: "MAR04201" @@ -133667,7 +132767,7 @@ - MAM02040c: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "ZK550.3" + - gene_reaction_rule: "eelo-2" - rxnNotes: "" - eccodes: "3.4.24.15" - references: "PMID:11284698;PMID:8373360" @@ -133946,7 +133046,7 @@ - MAM03105c: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(aos-1 and uba-2) or B0281.8 or C02B8.6 or C17H11.6 or C18B12.4 or C28G1.6 or F10D7.5 or F10G7.10 or F40G9.19 or F43C11.7 or F56D2.2 or H10E21.5 or M110.3 or T05A12.4 or T22C1.1 or Y105E8A.14 or Y53G8AR.5 or Y54E10BR.3 or Y57A10A.31 or Y71F9AL.10 or Y92H12A.2 or ZK1240.3 or ZK1240.5 or ZK1240.8 or brap-2 or brd-1 or chn-1 or eel-1 or etc-1 or exc-14 or hecd-1 or hecw-1 or herc-1 or hrdl-1 or lep-2 or let-70 or madd-2 or marc-2 or marc-3 or marc-4 or marc-6 or mgrn-1 or mib-1 or ntl-4 or oxi-1 or pdr-1 or rbpl-1 or rcs-1 or rfl-1 or rfp-1 or rnf-5 or rpm-1 or sel-11 or siah-1 or sli-1 or spat-3 or uba-1 or ubc-1 or ubc-12 or ubc-13 or ubc-14 or ubc-16 or ubc-17 or ubc-18 or ubc-20 or ubc-25 or ubc-26 or ubc-3 or ubc-6 or ubc-7 or ubc-8 or ubc-9 or ubr-1 or ubr-4 or ubr-5 or ufd-2 or wwp-1" + - gene_reaction_rule: "(aos-1 and uba-2) or C02B8.6 or C17H11.6 or C18B12.4 or C28G1.6 or F10D7.5 or F10G7.10 or F40G9.19 or F43C11.7 or F56D2.2 or H10E21.5 or M110.3 or T05A12.4 or T22C1.1 or Y105E8A.14 or Y53G8AR.5 or Y57A10A.31 or Y71F9AL.10 or Y92H12A.2 or ZK1240.3 or ZK1240.5 or ZK1240.8 or brap-2 or brd-1 or chn-1 or eel-1 or etc-1 or exc-14 or hecd-1 or hecw-1 or herc-1 or hrdl-1 or lep-2 or let-70 or madd-2 or marc-2 or marc-3 or marc-4 or marc-6 or mgrn-1 or mib-1 or ntl-4 or oxi-1 or pdr-1 or rbpl-1 or rcs-1 or rfl-1 or rfp-1 or rnf-126 or rnf-5 or rpm-1 or sel-11 or siah-1 or sli-1 or spat-3 or trim-21 or uba-1 or ubc-1 or ubc-12 or ubc-13 or ubc-14 or ubc-16 or ubc-17 or ubc-18 or ubc-20 or ubc-25 or ubc-26 or ubc-3 or ubc-6 or ubc-7 or ubc-8 or ubc-9 or ubr-1 or ubr-4 or ubr-5 or ufd-2 or wwp-1" - rxnNotes: "" - eccodes: "6.3.2.19" - references: "" @@ -134171,7 +133271,7 @@ - MAM01864c: 1 - MAM02034c: -1 - MAM02759c: 1 - - lower_bound: -1000 + - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "cel-1" - rxnNotes: "" @@ -134394,11 +133494,11 @@ - id: "MAR09523" - name: "delta2-isopentenyl-diphosphate:tRNA isopentenyltransferase" - metabolites: !!omap - - MAM01706c: 1 - - MAM02759c: -1 - - MAM03060c: -1 - - MAM03083c: 1 - - lower_bound: -1000 + - MAM01706c: -1 + - MAM02759c: 1 + - MAM03060c: 1 + - MAM03083c: -1 + - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "gro-1" - rxnNotes: "" @@ -134560,7 +133660,7 @@ - MAM02889c: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F13H8.9" + - gene_reaction_rule: "scly-1" - rxnNotes: "" - eccodes: "4.4.1.16" - references: "" @@ -139502,7 +138602,7 @@ - gene_reaction_rule: "abt-2" - rxnNotes: "" - eccodes: "" - - references: "PMID:16858612" + - references: "PMID:16858612;PMID:24653705;PMID:9831619;PMID:5555776;PMID:23104810" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -139792,11 +138892,11 @@ - metabolites: !!omap - MAM02746c: 1 - MAM02746e: -1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - - eccodes: "" + - eccodes: "1.14.99.1" - references: "" - subsystem: - "Transport reactions" @@ -140394,7 +139494,7 @@ - MAM01840e: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "C35A11.4 or F13B12.2 or K08F9.1 or Y37A1A.3 or fgt-1 or slcf-2" + - gene_reaction_rule: "C35A11.4 or F13B12.2 or K08F9.1 or Y37A1A.3 or fdgt-1 or slcf-2" - rxnNotes: "" - eccodes: "" - references: "PMID:12750891" @@ -140598,7 +139698,7 @@ - MAM01910e: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "fgt-1" + - gene_reaction_rule: "fdgt-1" - rxnNotes: "" - eccodes: "" - references: "PMID:11780753;PMID:11882499;PMID:12750891;PMID:16669350;PMID:1701966;PMID:3399500" @@ -141016,7 +140116,7 @@ - MAM02453e: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "fgt-1" + - gene_reaction_rule: "fdgt-1" - rxnNotes: "" - eccodes: "" - references: "PMID:12750891" @@ -141189,7 +140289,7 @@ - MAM01962e: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "fgt-1" + - gene_reaction_rule: "fdgt-1" - rxnNotes: "" - eccodes: "" - references: "PMID:12750891" @@ -141403,7 +140503,7 @@ - MAM01965e: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "C35A11.4 or F13B12.2 or K08F9.1 or Y37A1A.3 or fgt-1 or slcf-2" + - gene_reaction_rule: "C35A11.4 or F13B12.2 or K08F9.1 or Y37A1A.3 or fdgt-1 or slcf-2" - rxnNotes: "" - eccodes: "" - references: "PMID:11780753;PMID:11780754;PMID:11882499;PMID:16314530;PMID:16669350;PMID:9770484" @@ -142028,7 +141128,7 @@ - MAM03146l: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "T13C2.6" + - gene_reaction_rule: "gldi-2" - rxnNotes: "" - eccodes: "" - references: "" @@ -142043,7 +141143,7 @@ - MAM01569l: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "T13C2.6" + - gene_reaction_rule: "gldi-2" - rxnNotes: "" - eccodes: "" - references: "" @@ -154816,63 +153916,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR06142" - - name: "" - - metabolites: !!omap - - MAM00591c: -1 - - MAM00591e: 1 - - MAM01980c: 1 - - MAM01980e: -1 - - MAM02046c: 1 - - MAM02046e: -1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "F21G4.1" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:14579113;PMID:11076396" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR06143" - - name: "" - - metabolites: !!omap - - MAM00591c: -1 - - MAM00591e: 1 - - MAM02046c: 1 - - MAM02046e: -1 - - MAM02900c: 1 - - MAM02900e: -1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "F21G4.1" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:14579113;PMID:11076396" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR06144" - - name: "" - - metabolites: !!omap - - MAM00591c: -1 - - MAM00591e: 1 - - MAM02046c: 1 - - MAM02046e: -1 - - MAM02901c: 1 - - MAM02901e: -1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "F21G4.1" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:14579113;PMID:11076396" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR06145" - name: "" @@ -156298,25 +155341,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR06220" - - name: "" - - metabolites: !!omap - - MAM00591c: -1 - - MAM00591e: 1 - - MAM02026c: 1 - - MAM02026e: -1 - - MAM02046c: 1 - - MAM02046e: -1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "F21G4.1" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:11076394;PMID:11076396;PMID:14579113" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR06221" - name: "" @@ -156868,21 +155892,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR06252" - - name: "" - - metabolites: !!omap - - MAM00591c: -1 - - MAM00591e: 1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:12883891;PMID:12856180;PMID:11023036;PMID:1554704;PMID:18021224;PMID:4553030;PMID:793184;PMID:8725559;PMID:8781017;PMID:12739169" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR06253" - name: "" @@ -160652,7 +159661,7 @@ - MAM02450e: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "fgt-1" + - gene_reaction_rule: "fdgt-1" - rxnNotes: "" - eccodes: "" - references: "" @@ -161293,7 +160302,7 @@ - MAM01655e: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "fgt-1" + - gene_reaction_rule: "fdgt-1" - rxnNotes: "" - eccodes: "" - references: "" @@ -161467,7 +160476,7 @@ - MAM01758e: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "fgt-1" + - gene_reaction_rule: "fdgt-1" - rxnNotes: "" - eccodes: "" - references: "" @@ -167206,23 +166215,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR07758" - - name: "" - - metabolites: !!omap - - MAM01514c: -1 - - MAM01514m: 1 - - MAM02039i: -1 - - MAM02039m: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acbp-1" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR07769" - name: "" @@ -174551,7 +173543,7 @@ - MAM01965g: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "fgt-1" + - gene_reaction_rule: "fdgt-1" - rxnNotes: "" - eccodes: "" - references: "" @@ -176590,7 +175582,7 @@ - MAM01965r: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "fgt-1" + - gene_reaction_rule: "fdgt-1" - rxnNotes: "" - eccodes: "" - references: "PMID:11780753;PMID:11780754;PMID:11882499;PMID:16314530;PMID:16669350;PMID:9770484" @@ -184529,34 +183521,6 @@ - subsystem: - "Pool reactions" - confidence_score: 0 - - !!omap - - id: "MAR00032" - - name: "" - - metabolites: !!omap - - MAM00240c: 0.19 - - MAM00511c: 0.0014 - - MAM00560c: 0.0024 - - MAM00656c: 0.0006 - - MAM01450c: 0.005 - - MAM01451c: 0.34 - - MAM02392c: -1 - - MAM02629c: 0.0008 - - MAM02684c: 0.0092 - - MAM02685c: 0.0034 - - MAM02750c: 0.0016 - - MAM02808c: 0.0002 - - MAM02908c: 0.0004 - - MAM02958c: 0.44 - - MAM10005c: 0.005 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "gsp-1 or gsp-2 or kin-1 or lbp-5 or lbp-6" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Pool reactions" - - confidence_score: 0 - !!omap - id: "MAR00021" - name: "" @@ -184766,7 +183730,7 @@ - MAM00005c: -1 - MAM00013c: -1 - MAM00014x: -1 - - MAM00029c: -1 + - MAM00028c: -1 - MAM00254c: -1 - MAM00254m: -1 - MAM00254x: -1 @@ -184953,7 +183917,6 @@ - MAM00660c: -1 - MAM00660r: -1 - MAM00747r: -1 - - MAM00759c: -1 - MAM00828r: -1 - MAM00830c: -1 - MAM00925c: -1 @@ -184972,6 +183935,7 @@ - MAM01001x: -1 - MAM01011c: -1 - MAM01012c: -1 + - MAM01314c: -1 - MAM01792r: -1 - MAM01794r: -1 - MAM02469c: -1 @@ -185038,24 +184002,6 @@ - subsystem: - "Ubiquinone synthesis" - confidence_score: 0 - - !!omap - - id: "MAR00042" - - name: "3-Hydroxyisobutyryl Coenzyme A Hydrolase, Mitochondrial" - - metabolites: !!omap - - MAM00784m: 1 - - MAM01597m: 1 - - MAM02039m: 1 - - MAM02040m: -1 - - MAM03226m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "3.1.2.4" - - references: "PMID:8824301" - - subsystem: - - "Valine, leucine, and isoleucine metabolism" - - confidence_score: 0 - !!omap - id: "MAR00043" - name: "3-Hydroxyisobutyryl-Coenzyme A Hydrolase" @@ -185318,24 +184264,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR00059" - - name: "Acyl-Coenzyme A Oxidase 2, Branched Chain" - - metabolites: !!omap - - MAM00037x: 1 - - MAM00755x: -1 - - MAM01802x: 1 - - MAM01803x: -1 - - MAM02630x: -0.5 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1" - - rxnNotes: "" - - eccodes: "1.3.3.6" - - references: "PMID:11181649" - - subsystem: - - "Bile acid biosynthesis" - - confidence_score: 0 - !!omap - id: "MAR00060" - name: "O-Acetylcarnintine Transport into Mitochondria via Diffusion" @@ -185916,25 +184844,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR00096" - - name: "Beta-Ureidopropionase (D-3-Amino-Isobutanoate Forming)" - - metabolites: !!omap - - MAM00922c: -1 - - MAM01596c: 1 - - MAM01633c: 1 - - MAM02039c: -2 - - MAM02040c: -1 - - MAM02579c: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "upb-1" - - rxnNotes: "" - - eccodes: "3.5.1.6" - - references: "PMID:11508704;PMID:5773299" - - subsystem: - - "Pyrimidine metabolism" - - confidence_score: 0 - !!omap - id: "MAR00097" - name: "Butyrate Mitochondrial Transport via Proton Symport, Reversible" @@ -187231,9 +186140,9 @@ - metabolites: !!omap - MAM00558x: 1 - MAM01742x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - - MAM02041x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "daao-1" @@ -187976,20 +186885,6 @@ - subsystem: - "Exchange/demand reactions" - confidence_score: 0 - - !!omap - - id: "MAR00659" - - name: "Exchange of Phytanic Acid" - - metabolites: !!omap - - MAM03884e: -1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Exchange/demand reactions" - - confidence_score: 0 - !!omap - id: "MAR00661" - name: "Exchange of Phosphatidylserine (Homo Sapiens)" @@ -188520,12 +187415,12 @@ - metabolites: !!omap - MAM01261x: 4 - MAM01597x: -4 + - MAM01802x: -4 + - MAM01803x: 4 - MAM02039x: 4 - MAM02040x: -4 - - MAM02041x: 4 - MAM02552x: -4 - MAM02553x: 4 - - MAM02630x: -4 - MAM02644x: 1 - MAM02678x: -1 - lower_bound: 0 @@ -188635,12 +187530,12 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM02678x: 1 - MAM02941x: -1 - lower_bound: 0 @@ -188819,13 +187714,13 @@ - metabolites: !!omap - MAM01261x: 5 - MAM01597x: -5 + - MAM01802x: -2 + - MAM01803x: 2 - MAM01934x: -1 - MAM02039x: 5 - MAM02040x: -5 - - MAM02041x: 2 - MAM02552x: -5 - MAM02553x: 5 - - MAM02630x: -2 - MAM02644x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -188866,12 +187761,12 @@ - MAM00108x: -1 - MAM01261x: 5 - MAM01597x: -5 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 5 - MAM02040x: -5 - - MAM02041x: 1 - MAM02552x: -5 - MAM02553x: 5 - - MAM02630x: -1 - MAM02644x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -188912,12 +187807,12 @@ - MAM01261x: 1 - MAM01597x: -1 - MAM01773x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM02941x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -189069,12 +187964,12 @@ - MAM01261x: 1 - MAM01364x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "((acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and dhs-28) or ((acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and (ech-8 or ech-9))" @@ -189115,12 +188010,12 @@ - MAM00103x: 1 - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "((acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and dhs-28) or ((acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and (ech-8 or ech-9))" @@ -189179,12 +188074,12 @@ - MAM01261x: 2 - MAM01597x: -2 - MAM01773x: 1 + - MAM01802x: -2 + - MAM01803x: 2 - MAM02039x: 2 - MAM02040x: -2 - - MAM02041x: 2 - MAM02552x: -2 - MAM02553x: 2 - - MAM02630x: -2 - MAM02971x: -1 - lower_bound: 0 - upper_bound: 1000 @@ -189202,12 +188097,12 @@ - MAM00025x: -1 - MAM01261x: 3 - MAM01597x: -3 + - MAM01802x: -3 + - MAM01803x: 3 - MAM02039x: 3 - MAM02040x: -3 - - MAM02041x: 3 - MAM02552x: -3 - MAM02553x: 3 - - MAM02630x: -3 - MAM02647x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -189226,12 +188121,12 @@ - MAM00131x: -1 - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "((acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and dhs-28) or ((acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and (ech-8 or ech-9))" @@ -189249,12 +188144,12 @@ - MAM00134x: -1 - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "((acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and dhs-28) or ((acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and (ech-8 or ech-9))" @@ -189272,12 +188167,12 @@ - MAM00110x: -1 - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "((acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and dhs-28) or ((acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and (ech-8 or ech-9))" @@ -189295,12 +188190,12 @@ - MAM00113x: -1 - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "((acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and dhs-28) or ((acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and (ech-8 or ech-9))" @@ -189316,13 +188211,13 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02110x: -1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM02971x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -189711,8 +188606,8 @@ - upper_bound: 1000 - gene_reaction_rule: "gpdh-3" - rxnNotes: "" - - eccodes: "1.1.99.5" - - references: "PMID:11385633;PMID:8549872" + - eccodes: "1.1.5.3;1.1.99.5" + - references: "PMID:11955283;PMID:2115809;PMID:2923620;PMID:3338458;PMID:340460;PMID:8401296;PMID:8549872;PMID:8579375;PMID:9171333;PMID:9244403;PMID:9559543;PMID:11385633" - subsystem: - "Glycolysis / Gluconeogenesis" - confidence_score: 0 @@ -190219,26 +189114,6 @@ - subsystem: - "Bile acid biosynthesis" - confidence_score: 0 - - !!omap - - id: "MAR01458" - - name: "Hydroxysteroid (17-Beta) Dehydrogenase 4" - - metabolites: !!omap - - MAM00748x: 1 - - MAM00749x: -1 - - MAM02039x: -1 - - MAM02040x: 1 - - MAM02554x: 1 - - MAM02555x: -1 - - MAM02630x: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "dhs-28" - - rxnNotes: "" - - eccodes: "3.10.1.1" - - references: "" - - subsystem: - - "Bile acid biosynthesis" - - confidence_score: 0 - !!omap - id: "MAR01461" - name: "H Transporter, Endoplasmic Reticulum" @@ -190703,7 +189578,7 @@ - MAM02444m: -1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "C50D2.9" + - gene_reaction_rule: "mcat-1" - rxnNotes: "" - eccodes: "2.3.1.39" - references: "PMID:12882974" @@ -190848,10 +189723,10 @@ - MAM02519e: -1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "ZK822.5" + - gene_reaction_rule: "((mec-10 or mec-4) and mec-10) or mec-10 or mec-4 or nca-2" - rxnNotes: "" - eccodes: "" - - references: "PMID:10893432;PMID:11024018;PMID:11034615;PMID:12679487;PMID:12748858;PMID:1372904;PMID:15546855;PMID:2490366;PMID:7537337;PMID:7789985;PMID:8063771;PMID:8559252;PMID:8806637;PMID:9341168" + - references: "PMID:10893432;PMID:11024018;PMID:11034615;PMID:12679487;PMID:12748858;PMID:1372904;PMID:15546855;PMID:2490366;PMID:7537337;PMID:7789985;PMID:8063771;PMID:8559252;PMID:8806637;PMID:9341168;PMID:22573384;PMID:26772908" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -191371,12 +190246,12 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -3 + - MAM01802x: -2 + - MAM01803x: 2 - MAM02039x: 5 - MAM02040x: -3 - - MAM02041x: 2 - MAM02552x: -3 - MAM02553x: 3 - - MAM02630x: -2 - MAM02774x: 2 - MAM03554x: 1 - MAM03887x: -1 @@ -191471,21 +190346,6 @@ - subsystem: - "Phenylalanine metabolism" - confidence_score: 0 - - !!omap - - id: "MAR01617" - - name: "Fatty Acid Transport via Diffusion" - - metabolites: !!omap - - MAM03884c: 1 - - MAM03884e: -1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "1.14.99.1" - - references: "" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR01618" - name: "Phosphatidylinositol 4-Phosphate 3-Kinase, Endoplasmic Reticulum" @@ -191857,8 +190717,8 @@ - MAM01597x: 1 - MAM02039x: 1 - MAM02040x: -1 + - MAM02746x: 1 - MAM02747x: -1 - - MAM03884x: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "T05E7.1" @@ -192011,21 +190871,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR01709" - - name: "Sterol Carrier Protein 2" - - metabolites: !!omap - - MAM03554c: -1 - - MAM03554x: 1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "daf-22" - - rxnNotes: "" - - eccodes: "1.5.1.10" - - references: "PMID:1703300" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR01711" - name: "Peroxisomal Thiolase 2" @@ -192561,22 +191406,7 @@ - metabolites: !!omap - MAM03142c: 1 - MAM03142m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR01823" - - name: "Vitamin D3 Transport in Mitochondria" - - metabolites: !!omap - - MAM03142c: -1 - - MAM03142m: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" @@ -193104,25 +191934,6 @@ - subsystem: - "Starch and sucrose metabolism" - confidence_score: 0 - - !!omap - - id: "MAR02027" - - name: "L-Cysteine L-Homocysteine-Lyase (Deaminating)" - - metabolites: !!omap - - MAM01628c: -1 - - MAM02039c: 1 - - MAM02040c: -1 - - MAM02042c: 1 - - MAM02579c: 1 - - MAM02819c: 1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "cth-1 or cth-2" - - rxnNotes: "" - - eccodes: "4.4.1.1" - - references: "PMID:10212249;PMID:629532" - - subsystem: - - "Cysteine and methionine metabolism" - - confidence_score: 0 - !!omap - id: "MAR02028" - name: "Trans-Hexadec-2-Enoyl Coenzyme A Reductase" @@ -193141,23 +191952,6 @@ - subsystem: - "Fatty acid oxidation" - confidence_score: 0 - - !!omap - - id: "MAR02035" - - name: "Palmitoyl Coenzyme A:Oxygen 2-Oxidoreductase" - - metabolites: !!omap - - MAM00051m: 1 - - MAM02678m: -1 - - MAM03102m: 1 - - MAM03103m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acdh-10 or acdh-12 or acdh-8 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - - rxnNotes: "" - - eccodes: "1.3.99.3" - - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265" - - subsystem: - - "Fatty acid oxidation" - - confidence_score: 0 - !!omap - id: "MAR02119" - name: "L-Tryptophan, Tetrahydrobiopterin:Oxygen Oxidoreductase (5-Hydroxylating)" @@ -193358,24 +192152,6 @@ - subsystem: - "Fatty acid oxidation" - confidence_score: 0 - - !!omap - - id: "MAR02185" - - name: " (3R)-3-Hydroxytetradecanoyl-[Acyl-Carrier-Protein]:NADP+ Oxidoreductase Fatty Acid Biosynthesis" - - metabolites: !!omap - - MAM00905c: 1 - - MAM02039c: 1 - - MAM02130c: -1 - - MAM02554c: -1 - - MAM02555c: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "fasn-1" - - rxnNotes: "" - - eccodes: "2.3.1.85" - - references: "PMID:11750882;PMID:4452359;PMID:6137188;PMID:7567999;PMID:7834997;PMID:8962082" - - subsystem: - - "Fatty acid biosynthesis" - - confidence_score: 0 - !!omap - id: "MAR02187" - name: "Trans-Dec-2-Enoyl Coenzyme A Reductase" @@ -193720,41 +192496,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR02276" - - name: "ATP-Binding Cassette (ABC) Tcdb:3.A.1.208.2" - - metabolites: !!omap - - MAM01285c: 1 - - MAM01371c: -1 - - MAM02039c: 1 - - MAM02040c: -1 - - MAM02751c: 1 - - MAM03318c: -1 - - MAM03318e: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "mrp-1" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:14716480;PMID:15209530;PMID:15297262" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR02277" - - name: "Facilitated Diffusion" - - metabolites: !!omap - - MAM03318c: -1 - - MAM03318r: 1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:15975683" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR02278" - name: "Facilitated Diffusion" @@ -194401,24 +193142,6 @@ - subsystem: - "Miscellaneous" - confidence_score: 0 - - !!omap - - id: "MAR02358" - - name: "NADPH:Oxidized-Thioredoxin Oxidoreductase" - - metabolites: !!omap - - MAM02039m: 1 - - MAM02554m: -1 - - MAM02555m: 1 - - MAM02666m: 1 - - MAM02990m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "trxr-1 or trxr-2" - - rxnNotes: "" - - eccodes: "1.8.1.9" - - references: "PMID:5553404;PMID:5671058" - - subsystem: - - "Miscellaneous" - - confidence_score: 0 - !!omap - id: "MAR02360" - name: "Active Transport" @@ -194434,108 +193157,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR02366" - - name: "Acyl-CoA Oxidase" - - metabolites: !!omap - - MAM01412m: -1 - - MAM01622m: 1 - - MAM03102m: 1 - - MAM03103m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - - rxnNotes: "" - - eccodes: "1.3.3.6" - - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265" - - subsystem: - - "Miscellaneous" - - confidence_score: 0 - - !!omap - - id: "MAR02367" - - name: "Acyl-CoA Oxidase" - - metabolites: !!omap - - MAM00042m: 1 - - MAM02345m: -1 - - MAM03102m: 1 - - MAM03103m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - - rxnNotes: "" - - eccodes: "1.3.3.6" - - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265" - - subsystem: - - "Fatty acid oxidation" - - confidence_score: 0 - - !!omap - - id: "MAR02369" - - name: "Acyl-CoA Oxidase" - - metabolites: !!omap - - MAM00059m: 1 - - MAM02644m: -1 - - MAM03102m: 1 - - MAM03103m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - - rxnNotes: "" - - eccodes: "1.3.3.6" - - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265" - - subsystem: - - "Fatty acid oxidation" - - confidence_score: 0 - - !!omap - - id: "MAR02370" - - name: "Acyl-CoA Oxidase" - - metabolites: !!omap - - MAM00066m: 1 - - MAM02495m: -1 - - MAM03102m: 1 - - MAM03103m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - - rxnNotes: "" - - eccodes: "1.3.3.6" - - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265" - - subsystem: - - "Fatty acid oxidation" - - confidence_score: 0 - - !!omap - - id: "MAR02372" - - name: "Acyl-CoA Oxidase" - - metabolites: !!omap - - MAM00053m: 1 - - MAM02122m: -1 - - MAM03102m: 1 - - MAM03103m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - - rxnNotes: "" - - eccodes: "1.3.3.6" - - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265" - - subsystem: - - "Fatty acid oxidation" - - confidence_score: 0 - - !!omap - - id: "MAR02373" - - name: "Acyl-CoA Oxidase" - - metabolites: !!omap - - MAM00039m: 1 - - MAM01650m: -1 - - MAM03102m: 1 - - MAM03103m: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - - rxnNotes: "" - - eccodes: "1.3.3.6" - - references: "PMID:17603022;PMID:1774065;PMID:3597357;PMID:6240978;PMID:7876265" - - subsystem: - - "Fatty acid oxidation" - - confidence_score: 0 - !!omap - id: "MAR02375" - name: "Long-Chain-Acyl Coenzyme A Dehydrogenase" @@ -194599,7 +193220,7 @@ - MAM02677m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(B0303.3 and acaa-2) or B0303.3" + - gene_reaction_rule: "(acaa-2 and hadb-1) or hadb-1" - rxnNotes: "" - eccodes: "2.3.1.86" - references: "" @@ -194661,63 +193282,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR02390" - - name: "Resistance-Nodulation-Cell Division (Rnd) Tcdb:2.A.60.1.14" - - metabolites: !!omap - - MAM01980c: -1 - - MAM01980e: 1 - - MAM02046c: -1 - - MAM02046e: 1 - - MAM03318c: 1 - - MAM03318e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "F21G4.1" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:11076394;PMID:11076396;PMID:14579113" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR02392" - - name: "Resistance-Nodulation-Cell Division (Rnd) Tcdb:2.A.60.1.14" - - metabolites: !!omap - - MAM02046c: -1 - - MAM02046e: 1 - - MAM02900c: -1 - - MAM02900e: 1 - - MAM03318c: 1 - - MAM03318e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "F21G4.1" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:11076394;PMID:11076396;PMID:14579113" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR02394" - - name: "Resistance-Nodulation-Cell Division (Rnd) Tcdb:2.A.60.1.14" - - metabolites: !!omap - - MAM02046c: -1 - - MAM02046e: 1 - - MAM02901c: -1 - - MAM02901e: 1 - - MAM03318c: 1 - - MAM03318e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "F21G4.1" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:11076394;PMID:11076396;PMID:14579113" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR02396" - name: "Resistance-Nodulation-Cell Division (Rnd) Tcdb:2.A.60.1.5" @@ -194728,7 +193292,7 @@ - MAM01980e: 1 - MAM02046c: -1 - MAM02046e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "F21G4.1" - rxnNotes: "" @@ -194747,7 +193311,7 @@ - MAM02046e: 1 - MAM02900c: -1 - MAM02900e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "F21G4.1" - rxnNotes: "" @@ -194766,7 +193330,7 @@ - MAM02046e: 1 - MAM02901c: -1 - MAM02901e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "F21G4.1" - rxnNotes: "" @@ -196095,7 +194659,7 @@ - MAM02387m: -1 - MAM02391m: 1 - MAM02759m: 1 - - lower_bound: -1000 + - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acs-13 or acs-17" - rxnNotes: "" @@ -196114,7 +194678,7 @@ - MAM02387x: -1 - MAM02391x: 1 - MAM02759x: 1 - - lower_bound: -1000 + - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "acs-13 or acs-17" - rxnNotes: "" @@ -196135,10 +194699,10 @@ - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - rxnNotes: "" - - eccodes: "1.3.99.13" + - eccodes: "1.3.99.13;1.3.3.6" - references: "PMID:10407780;PMID:11356167;PMID:8973539" - subsystem: - - "Fatty acid oxidation" + - "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)" - confidence_score: 0 - !!omap - id: "MAR02808" @@ -196152,10 +194716,10 @@ - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - rxnNotes: "" - - eccodes: "1.3.99.13" + - eccodes: "1.3.99.13;1.3.3.6" - references: "PMID:10407780;PMID:11356167;PMID:8973539" - subsystem: - - "Fatty acid oxidation" + - "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)" - confidence_score: 0 - !!omap - id: "MAR02810" @@ -196169,10 +194733,10 @@ - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - rxnNotes: "" - - eccodes: "1.3.99.13" + - eccodes: "1.3.99.13;1.3.3.6" - references: "PMID:10407780;PMID:11356167;PMID:8973539" - subsystem: - - "Fatty acid oxidation" + - "Beta oxidation of di-unsaturated fatty acids (n-6) (peroxisomal)" - confidence_score: 0 - !!omap - id: "MAR02818" @@ -196187,7 +194751,7 @@ - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - rxnNotes: "" - eccodes: "1.3.99.13" - - references: "PMID:10407780;PMID:11356167;PMID:8973539" + - references: "PMID:10407780;PMID:11356167;PMID:8973539;PMID:18536048;PMID:17458872" - subsystem: - "Fatty acid oxidation" - confidence_score: 0 @@ -196553,10 +195117,10 @@ - name: "Palmitoyl Coenzyme A Hydrolase" - metabolites: !!omap - MAM01434m: -1 + - MAM01435m: 1 - MAM01597m: 1 - MAM02039m: 1 - MAM02040m: -1 - - MAM03318m: 1 - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "T05E7.1" @@ -197765,7 +196329,7 @@ - MAM03334m: -1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or B0303.3 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-8 or ech-9" + - gene_reaction_rule: "B0272.3 or ard-1 or dhs-28 or ech-1.1 or ech-1.2 or ech-8 or ech-9 or hadb-1" - rxnNotes: "" - eccodes: "1.1.1.35" - references: "PMID:11427448" @@ -197858,10 +196422,10 @@ - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - rxnNotes: "" - - eccodes: "1.3.99.3" + - eccodes: "1.3.99.3;1.3.3.6" - references: "PMID:1047780;PMID:11135616;PMID:8973539" - subsystem: - - "Fatty acid oxidation" + - "Beta oxidation of unsaturated fatty acids (n-9) (peroxisomal)" - confidence_score: 0 - !!omap - id: "MAR03289" @@ -197875,10 +196439,10 @@ - upper_bound: 1000 - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3" - rxnNotes: "" - - eccodes: "1.3.99.3" + - eccodes: "1.3.99.3;1.3.3.6" - references: "PMID:1047780;PMID:11135616;PMID:8973539" - subsystem: - - "Fatty acid oxidation" + - "Beta oxidation of unsaturated fatty acids (n-9) (peroxisomal)" - confidence_score: 0 - !!omap - id: "MAR03291" @@ -197923,7 +196487,7 @@ - MAM03334m: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "B0303.3 or ech-1.1 or ech-1.2 or ech-6 or ech-8 or ech-9" + - gene_reaction_rule: "ech-1.1 or ech-1.2 or ech-6 or ech-8 or ech-9 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17" - references: "PMID:10407780;PMID:7923814;PMID:9568246;PMID:9920399" @@ -198165,7 +196729,7 @@ - MAM03360m: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "1.3.1.34" - references: "PMID:10407780;PMID:7775433" @@ -198196,7 +196760,7 @@ - MAM03361m: -1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "B0303.3 or ech-1.1 or ech-1.2 or ech-6 or ech-8 or ech-9" + - gene_reaction_rule: "ech-1.1 or ech-1.2 or ech-6 or ech-8 or ech-9 or hadb-1" - rxnNotes: "" - eccodes: "4.2.1.17" - references: "PMID:10407780;PMID:7775433" @@ -198231,7 +196795,7 @@ - MAM03352m: 1 - lower_bound: -1000 - upper_bound: 1000 - - gene_reaction_rule: "B0303.3 or acaa-2 or ech-1.1 or ech-1.2" + - gene_reaction_rule: "acaa-2 or ech-1.1 or ech-1.2 or hadb-1" - rxnNotes: "" - eccodes: "2.3.1.16" - references: "PMID:10407780;PMID:7775433" @@ -198355,7 +196919,7 @@ - MAM02746c: -1 - MAM02759c: 1 - MAM03362c: 1 - - lower_bound: -1000 + - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" @@ -198374,7 +196938,7 @@ - MAM01597c: -1 - MAM02759c: 1 - MAM02766c: -1 - - lower_bound: -1000 + - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" @@ -198608,7 +197172,7 @@ - name: "" - metabolites: !!omap - MAM00119c: -1 - - MAM00902c: 1 + - MAM00853c: 1 - MAM01596c: 1 - MAM01597c: 1 - MAM02039c: 1 @@ -198641,24 +197205,6 @@ - subsystem: - "Fatty acid oxidation" - confidence_score: 0 - - !!omap - - id: "MAR03441" - - name: "" - - metabolites: !!omap - - MAM00681c: -1 - - MAM02039c: -1 - - MAM02554c: 1 - - MAM02555c: -1 - - MAM03354c: 1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:10970790" - - subsystem: - - "Fatty acid oxidation" - - confidence_score: 0 - !!omap - id: "MAR03443" - name: "" @@ -199061,22 +197607,6 @@ - subsystem: - "Fatty acid biosynthesis" - confidence_score: 0 - - !!omap - - id: "MAR03754" - - name: "Enoyl Coenzyme A Hydratase" - - metabolites: !!omap - - MAM00749m: -1 - - MAM02040m: -1 - - MAM03367m: 1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "B0303.3 or ech-1.1 or ech-1.2 or ech-6 or ech-8 or ech-9" - - rxnNotes: "" - - eccodes: "4.2.1.17" - - references: "PMID:10709654" - - subsystem: - - "Fatty acid oxidation" - - confidence_score: 0 - !!omap - id: "MAR03756" - name: "Enoyl Coenzyme A Hydratase" @@ -199111,33 +197641,15 @@ - subsystem: - "Fatty acid oxidation" - confidence_score: 0 - - !!omap - - id: "MAR03760" - - name: "3-Hydroxyacyl Coenzyme A Dehydrogenase" - - metabolites: !!omap - - MAM02039m: 1 - - MAM02552m: -1 - - MAM02553m: 1 - - MAM03367m: -1 - - MAM03368m: 1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "B0272.3 or ard-1 or dhs-28 or ech-8 or ech-9" - - rxnNotes: "" - - eccodes: "1.1.1.35" - - references: "PMID:10709654" - - subsystem: - - "Fatty acid oxidation" - - confidence_score: 0 - !!omap - id: "MAR03764" - name: "3-Hydroxyacyl Coenzyme A Dehydrogenase" - metabolites: !!omap + - MAM00748x: 1 - MAM02039x: 1 - MAM02552x: -1 - MAM02553x: 1 - MAM03367x: -1 - - MAM03368x: 1 - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "dhs-28 or ech-8 or ech-9" @@ -199912,7 +198424,7 @@ - id: "MAR03914" - name: "" - metabolites: !!omap - - MAM03325c: -1 + - MAM00684c: -1 - MAM03405c: 1 - MAM03510c: 1 - lower_bound: -1000 @@ -200239,8 +198751,8 @@ - id: "MAR04001" - name: "Acyl Coenzyme A Oxidase" - metabolites: !!omap - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03021x: 1 - MAM03352x: -1 - lower_bound: 0 @@ -200854,20 +199366,6 @@ - subsystem: - "Exchange/demand reactions" - confidence_score: 0 - - !!omap - - id: "MAR04144" - - name: "Exchange of Chenodeoxycholate" - - metabolites: !!omap - - MAM03318e: -1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Exchange/demand reactions" - - confidence_score: 0 - !!omap - id: "MAR04146" - name: "Exchange of Taurolithocholate" @@ -202116,23 +200614,6 @@ - subsystem: - "Fatty acid oxidation" - confidence_score: 0 - - !!omap - - id: "MAR04506" - - name: "Production of Dodecanoylcarnitine" - - metabolites: !!omap - - MAM01597c: 1 - - MAM02345c: -1 - - MAM02348c: -1 - - MAM03540c: 1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "cpt-1" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:12828998;PMID:9498103;PMID:3955080" - - subsystem: - - "Fatty acid oxidation" - - confidence_score: 0 - !!omap - id: "MAR04508" - name: "Production of Dodecenoylcarnitine" @@ -203275,7 +201756,7 @@ - id: "MAR04923" - name: "Exchange of Lauroyl Carnitine" - metabolites: !!omap - - MAM03540e: -1 + - MAM01729e: -1 - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" @@ -203383,23 +201864,6 @@ - subsystem: - "Exchange/demand reactions" - confidence_score: 0 - - !!omap - - id: "MAR04966" - - name: "Fatty Acid Beta Oxidation (C10:1->C10:2), Peroxisomal" - - metabolites: !!omap - - MAM00678x: 1 - - MAM00980x: -1 - - MAM02041x: 1 - - MAM02630x: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:18536048;PMID:17458872" - - subsystem: - - "Fatty acid oxidation" - - confidence_score: 0 - !!omap - id: "MAR04967" - name: "Fatty Acid Beta Oxidation (C10:1->C8), Mitochondrial" @@ -203453,7 +201917,7 @@ - MAM03035m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "" - references: "PMID:7818482" @@ -203481,8 +201945,8 @@ - id: "MAR04981" - name: "Fatty Acid Beta Oxidation (C10:2->C10:3), Peroxisomal" - metabolites: !!omap - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03542x: -1 - MAM03545x: 1 - lower_bound: 0 @@ -203562,7 +202026,7 @@ - MAM03545m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "" - references: "PMID:7818482" @@ -203617,12 +202081,12 @@ - MAM01261x: 1 - MAM01597x: -1 - MAM01650x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM02644x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -203639,12 +202103,12 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM03922x: 1 - MAM03924x: -1 - lower_bound: 0 @@ -203661,12 +202125,12 @@ - name: "Fatty Acid Beta Oxidation (C11Br->C9Br), Peroxisomal" - metabolites: !!omap - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM02774x: 1 - MAM03554x: 1 - MAM04004x: -1 @@ -203869,13 +202333,13 @@ - MAM01261x: 1 - MAM01597x: -1 - MAM01650x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02345x: -1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "(acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and (ech-8 or ech-9) and dhs-28" @@ -203909,12 +202373,12 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM03491x: -1 - MAM03924x: 1 - lower_bound: 0 @@ -203982,12 +202446,12 @@ - MAM00948x: -1 - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM04004x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -204014,7 +202478,7 @@ - MAM03116m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:18391478" @@ -204037,7 +202501,7 @@ - MAM03972m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -204052,12 +202516,12 @@ - MAM01141x: -1 - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "(acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and (ech-8 or ech-9) and dhs-28" @@ -204101,7 +202565,7 @@ - MAM03978m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -204114,12 +202578,12 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM03203x: 1 - MAM03978x: -1 - lower_bound: 0 @@ -204165,7 +202629,7 @@ - MAM03288m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -204178,12 +202642,12 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM03211x: 1 - MAM03288x: -1 - lower_bound: 0 @@ -204211,7 +202675,7 @@ - MAM02553m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -204224,14 +202688,14 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02345x: 1 - MAM02495x: -1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "(acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and (ech-8 or ech-9) and dhs-28" @@ -204265,12 +202729,12 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM03491x: 1 - MAM03492x: -1 - lower_bound: 0 @@ -204288,12 +202752,12 @@ - metabolites: !!omap - MAM00948x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM02774x: 1 - MAM03887x: -1 - lower_bound: 0 @@ -204321,7 +202785,7 @@ - MAM03050m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:18391478" @@ -204384,7 +202848,7 @@ - MAM03972m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -204399,12 +202863,12 @@ - MAM01191x: -1 - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "(acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and (ech-8 or ech-9) and dhs-28" @@ -204448,7 +202912,7 @@ - MAM03978m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -204510,7 +202974,7 @@ - MAM03658m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -204538,8 +203002,8 @@ - id: "MAR05196" - name: "Fatty Acid Beta Oxidation (C16:3->C16:4), Peroxisomal" - metabolites: !!omap - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03274x: -1 - MAM03653x: 1 - lower_bound: 0 @@ -204565,7 +203029,7 @@ - MAM03978m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -204601,7 +203065,7 @@ - MAM03288m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -204650,8 +203114,8 @@ - id: "MAR05300" - name: "Fatty Acid Beta Oxidation (C16:4->C16:5), Peroxisomal" - metabolites: !!omap - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03273x: -1 - MAM03656x: 1 - lower_bound: 0 @@ -204674,7 +203138,7 @@ - MAM03653m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "" - references: "PMID:7818482" @@ -204707,7 +203171,7 @@ - MAM03656m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "" - references: "PMID:7818482" @@ -204730,7 +203194,7 @@ - MAM02678m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -204743,13 +203207,13 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02495x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM02678x: -1 - lower_bound: 0 - upper_bound: 1000 @@ -204784,12 +203248,12 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM03492x: 1 - MAM03655x: -1 - lower_bound: 0 @@ -204836,7 +203300,7 @@ - MAM02689m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:18391478" @@ -204859,7 +203323,7 @@ - MAM03791m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -204873,12 +203337,12 @@ - MAM01191x: 1 - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM03789x: -1 - lower_bound: 0 - upper_bound: 1000 @@ -204923,7 +203387,7 @@ - MAM03650m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "Harpers illustrated Biochemistry (2009) 28th edition page 242, ISBN:9781282335806" - eccodes: "" - references: "" @@ -204964,7 +203428,7 @@ - MAM03274m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -204987,7 +203451,7 @@ - MAM03658m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -205008,7 +203472,7 @@ - MAM03274m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -205052,7 +203516,7 @@ - MAM03273m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -205066,12 +203530,12 @@ - MAM00108x: -1 - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM03273x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -205111,7 +203575,7 @@ - MAM03273m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -205142,12 +203606,12 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM03567x: -1 - MAM03789x: 1 - lower_bound: 0 @@ -205175,7 +203639,7 @@ - MAM03571m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -205186,8 +203650,8 @@ - id: "MAR05374" - name: "Fatty Acid Beta Oxidation (C20:4->C20:5), Peroxisomal" - metabolites: !!omap - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03570x: 1 - MAM03571x: -1 - lower_bound: 0 @@ -205236,7 +203700,7 @@ - MAM03284m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -205249,12 +203713,12 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM03555x: -1 - MAM03567x: 1 - lower_bound: 0 @@ -205280,7 +203744,7 @@ - MAM03571m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -205330,8 +203794,8 @@ - name: "Fatty Acid Beta Oxidation (C22:5->C22:6), Peroxisomal" - metabolites: !!omap - MAM00093x: -1 - - MAM02041x: 1 - - MAM02630x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM03557x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -205371,7 +203835,7 @@ - MAM03284m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -205389,7 +203853,7 @@ - MAM03557m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "" - references: "PMID:7818482" @@ -205424,7 +203888,7 @@ - MAM03559m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "" - references: "PMID:7818482" @@ -205439,12 +203903,12 @@ - MAM01597x: -1 - MAM01725x: -1 - MAM01773x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "(acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and (ech-8 or ech-9) and dhs-28" @@ -205461,12 +203925,12 @@ - MAM00025x: -1 - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM03555x: 1 - lower_bound: 0 - upper_bound: 1000 @@ -205484,12 +203948,12 @@ - MAM01261x: 1 - MAM01597x: -1 - MAM01725x: 1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM02971x: -1 - lower_bound: 0 - upper_bound: 1000 @@ -205700,13 +204164,13 @@ - MAM01261x: 1 - MAM01412x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02122x: -1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "(acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4) and (ech-8 or ech-9) and dhs-28" @@ -205722,12 +204186,12 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM02944x: 1 - MAM03409x: -1 - lower_bound: 0 @@ -205791,12 +204255,12 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM03659x: 1 - MAM03794x: -1 - lower_bound: 0 @@ -205837,13 +204301,13 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02122x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM02644x: -1 - lower_bound: 0 - upper_bound: 1000 @@ -205860,12 +204324,12 @@ - metabolites: !!omap - MAM01261x: 1 - MAM01597x: -1 + - MAM01802x: -1 + - MAM01803x: 1 - MAM02039x: 1 - MAM02040x: -1 - - MAM02041x: 1 - MAM02552x: -1 - MAM02553x: 1 - - MAM02630x: -1 - MAM03409x: 1 - MAM03922x: -1 - lower_bound: 0 @@ -206008,7 +204472,7 @@ - MAM03522m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "F53C11.3 or decr-1.2 or decr-1.3" + - gene_reaction_rule: "decr-1.1 or decr-1.2 or decr-1.3" - rxnNotes: "" - eccodes: "" - references: "PMID:7818482" @@ -206052,7 +204516,7 @@ - MAM04041m: -1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -206075,7 +204539,7 @@ - MAM04041m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -206098,7 +204562,7 @@ - MAM03982m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "(ech-1.1 or ech-1.2) and B0303.3 and acdh-12" + - gene_reaction_rule: "(ech-1.1 or ech-1.2) and acdh-12 and hadb-1" - rxnNotes: "" - eccodes: "" - references: "PMID:20195903;PMID:20490924;PMID:17143551" @@ -213123,26 +211587,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR10164" - - name: "Transport of (8Z, 11Z, 14Z)-Eicosatrienoic Acid, Active Transport" - - metabolites: !!omap - - MAM01285c: 1 - - MAM01371c: -1 - - MAM02039c: 1 - - MAM02040c: -1 - - MAM02751c: 1 - - MAM03332c: -1 - - MAM03332e: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:24653705;PMID:9831619;PMID:5555776;PMID:23104810" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR10165" - name: "Transport of 15-Hydroxy- (8Z, 11Z, 13E)-Eicosatrienoate, Active Transport" @@ -217109,20 +215553,6 @@ - subsystem: - "Exchange/demand reactions" - confidence_score: 0 - - !!omap - - id: "MAR10433" - - name: "Exchangefor (8Z, 11Z, 14Z)-Eicosatrienoic Acid" - - metabolites: !!omap - - MAM03332e: -1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Exchange/demand reactions" - - confidence_score: 0 - !!omap - id: "MAR10434" - name: "Exchange of Laurate" @@ -217319,35 +215749,17 @@ - subsystem: - "Bile acid biosynthesis" - confidence_score: 0 - - !!omap - - id: "MAR10447" - - name: "Formation of Sulfochenodeoxycholate" - - metabolites: !!omap - - MAM02039c: 1 - - MAM02681c: 1 - - MAM02682c: -1 - - MAM02950c: 1 - - MAM03318c: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "ssu-1" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:19131563;PMID:16949895" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR10448" - name: "Formation of 7-Ketolithocholate" - metabolites: !!omap + - MAM01435c: -1 - MAM02039c: -1 - MAM02040c: 2 - MAM02554c: 1 - MAM02555c: -1 - MAM02630c: -1 - MAM03313c: 1 - - MAM03318c: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "" @@ -217665,22 +216077,7 @@ - metabolites: !!omap - MAM03837c: -1 - MAM03837e: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:21343587" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR10467" - - name: "Uptake of P-Cresol Sulfate" - - metabolites: !!omap - - MAM03837c: 1 - - MAM03837e: -1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" @@ -217695,27 +216092,12 @@ - metabolites: !!omap - MAM03215c: 1 - MAM03215e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:12904817" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR10469" - - name: "3-Hydroxycinanmic Acid Secretion" - - metabolites: !!omap - - MAM03215c: -1 - - MAM03215e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - eccodes: "" - - references: "PMID:12904817" + - references: "PMID:12904817;PMID:12663291" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -217723,24 +216105,9 @@ - id: "MAR10470" - name: "3-Hydroxyphenylpropionic Acid Uptake" - metabolites: !!omap - - MAM03231c: 1 - MAM03231e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:12904817;PMID:12663291" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR10471" - - name: "3-Hydroxyphenylpropionic Acid Secretion" - - metabolites: !!omap - - MAM03231c: -1 - - MAM03231e: 1 - - lower_bound: 0 + - MAM03232c: 1 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" @@ -230555,8 +228922,8 @@ - id: "MAR11266" - name: "Transport of Lauroyl Carnitine" - metabolites: !!omap - - MAM03540c: 1 - - MAM03540e: -1 + - MAM01729c: 1 + - MAM01729e: -1 - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" @@ -234450,9 +232817,9 @@ - id: "MAR11529" - name: "Formation of 3-Hydroxy-Adipoyl Coa" - metabolites: !!omap + - MAM01802x: -1 + - MAM01803x: 1 - MAM02040x: -1 - - MAM02041x: 1 - - MAM02630x: -1 - MAM03213x: 1 - MAM03409x: -1 - lower_bound: 0 @@ -234530,9 +232897,9 @@ - id: "MAR11534" - name: "Formation of 3-Hydroxy-Sebacoyl Coa" - metabolites: !!omap + - MAM01802x: -1 + - MAM01803x: 1 - MAM02040x: -1 - - MAM02041x: 1 - - MAM02630x: -1 - MAM03259x: 1 - MAM03924x: -1 - lower_bound: 0 @@ -234610,9 +232977,9 @@ - id: "MAR11539" - name: "Formation of 3-Hydoxy-Suberyl Coa" - metabolites: !!omap + - MAM01802x: -1 + - MAM01803x: 1 - MAM02040x: -1 - - MAM02041x: 1 - - MAM02630x: -1 - MAM03261x: 1 - MAM03922x: -1 - lower_bound: 0 @@ -235334,12 +233701,12 @@ - metabolites: !!omap - MAM02750c: -1 - MAM02750e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - - eccodes: "" - - references: "PMID:8145081" + - eccodes: "3.6.3.44;3.6.3.1" + - references: "PMID:8145081;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -235349,12 +233716,12 @@ - metabolites: !!omap - MAM03803c: -1 - MAM03803e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - eccodes: "" - - references: "PMID:8145081" + - references: "PMID:8145081;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -235364,12 +233731,12 @@ - metabolites: !!omap - MAM03802c: -1 - MAM03802e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - eccodes: "" - - references: "PMID:8145081" + - references: "PMID:8145081;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -235379,12 +233746,12 @@ - metabolites: !!omap - MAM03804c: -1 - MAM03804e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - eccodes: "" - - references: "PMID:8145081" + - references: "PMID:8145081;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -235949,12 +234316,12 @@ - metabolites: !!omap - MAM03936c: -1 - MAM03936e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - - eccodes: "" - - references: "" + - eccodes: "3.6.3.1" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -235964,12 +234331,12 @@ - metabolites: !!omap - MAM03937c: -1 - MAM03937e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - - eccodes: "" - - references: "" + - eccodes: "3.6.3.1" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -235979,12 +234346,12 @@ - metabolites: !!omap - MAM03938c: -1 - MAM03938e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - - eccodes: "" - - references: "" + - eccodes: "3.6.3.1" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -235994,12 +234361,12 @@ - metabolites: !!omap - MAM03940c: -1 - MAM03940e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - - eccodes: "" - - references: "" + - eccodes: "3.6.3.1" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -236009,12 +234376,12 @@ - metabolites: !!omap - MAM03939c: -1 - MAM03939e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - - eccodes: "" - - references: "" + - eccodes: "3.6.3.1" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -236024,12 +234391,12 @@ - metabolites: !!omap - MAM03941c: -1 - MAM03941e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - - eccodes: "2.3.1.13" - - references: "" + - eccodes: "2.3.1.13;3.6.3.1" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -236039,12 +234406,12 @@ - metabolites: !!omap - MAM03943c: -1 - MAM03943e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - eccodes: "" - - references: "" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -236054,12 +234421,12 @@ - metabolites: !!omap - MAM03942c: -1 - MAM03942e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - eccodes: "" - - references: "" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -236069,12 +234436,12 @@ - metabolites: !!omap - MAM03945c: -1 - MAM03945e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - eccodes: "" - - references: "" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -236084,12 +234451,12 @@ - metabolites: !!omap - MAM03944c: -1 - MAM03944e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - eccodes: "" - - references: "" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -236099,12 +234466,12 @@ - metabolites: !!omap - MAM03946c: -1 - MAM03946e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - eccodes: "" - - references: "" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -236114,12 +234481,12 @@ - metabolites: !!omap - MAM03948c: -1 - MAM03948e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - eccodes: "" - - references: "" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -236129,12 +234496,12 @@ - metabolites: !!omap - MAM03947c: -1 - MAM03947e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - eccodes: "2.3.1.13" - - references: "" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -236144,12 +234511,12 @@ - metabolites: !!omap - MAM03949c: -1 - MAM03949e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - eccodes: "" - - references: "" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -236159,12 +234526,12 @@ - metabolites: !!omap - MAM03950c: -1 - MAM03950e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - eccodes: "" - - references: "" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -236174,12 +234541,12 @@ - metabolites: !!omap - MAM03951c: -1 - MAM03951e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" - eccodes: "" - - references: "" + - references: "PMID:11581500;PMID:10856719" - subsystem: - "Transport reactions" - confidence_score: 0 @@ -236237,66 +234604,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11649" - - name: "Transport of 1-Phosphatidyl-1D-Myo-Inositol, Vescicular" - - metabolites: !!omap - - MAM02750c: 1 - - MAM02750e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "3.6.3.44;3.6.3.1" - - references: "PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR11650" - - name: "Transport of 1-Arachidonoylglycerophosphoinositol, Vescicular" - - metabolites: !!omap - - MAM03802c: 1 - - MAM03802e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR11651" - - name: "Transport of 1-Palmitoylglycerophosphoinositol, Vescicular" - - metabolites: !!omap - - MAM03803c: 1 - - MAM03803e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - - !!omap - - id: "MAR11652" - - name: "Transport of 1-Stearoylglycerophosphoinositol, Vescicular" - - metabolites: !!omap - - MAM03804c: 1 - - MAM03804e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11653" - name: "Transport of 2-Linoleoylglycerophosphocholine, Vescicular" @@ -236967,21 +235274,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11697" - - name: "Transport of Sphingomyelin (D18:0/24:1) Vescicular Transport" - - metabolites: !!omap - - MAM03936c: 1 - - MAM03936e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "3.6.3.1" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11698" - name: "Transport of Sphingomyelin (D18:1/14:0), Active Transport" @@ -237002,21 +235294,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11699" - - name: "Transport of Sphingomyelin (D18:1/14:0), Vescicular Transport" - - metabolites: !!omap - - MAM03937c: 1 - - MAM03937e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "3.6.3.1" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11700" - name: "Transport of Sphingomyelin (D18:1/15:0), Active Transport" @@ -237037,21 +235314,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11701" - - name: "Transport of Sphingomyelin (D18:1/15:0), Vescicular Transport" - - metabolites: !!omap - - MAM03938c: 1 - - MAM03938e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "3.6.3.1" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11702" - name: "Transport of Sphingomyelin (D18:1/16:0), Active Transport" @@ -237072,21 +235334,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11703" - - name: "Transport of Sphingomyelin (D18:1/16:0), Vescicular Transport" - - metabolites: !!omap - - MAM03940c: 1 - - MAM03940e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "3.6.3.1" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11704" - name: "Transport of Sphingomyelin (D18:1/16:1), Active Transport" @@ -237107,21 +235354,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11705" - - name: "Transport of Sphingomyelin (D18:1/16:1), Vescicular Transport" - - metabolites: !!omap - - MAM03939c: 1 - - MAM03939e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "3.6.3.1" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11706" - name: "Transport of Sphingomyelin (D18:1/17:0), Active" @@ -237142,21 +235374,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11707" - - name: "Transport of Sphingomyelin (D18:1/17:0), Vescicular" - - metabolites: !!omap - - MAM03941c: 1 - - MAM03941e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "3.6.3.1" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11708" - name: "Transport of Sphingomyelin (D18:1/18:0), Active" @@ -237177,21 +235394,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11709" - - name: "Transport of Sphingomyelin (D18:1/18:0), Vescicular" - - metabolites: !!omap - - MAM03943c: 1 - - MAM03943e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11710" - name: "Transport of Sphingomyelin (D18:1/18:1), Active" @@ -237212,21 +235414,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11711" - - name: "Transport of Sphingomyelin (D18:1/18:1), Vescicular" - - metabolites: !!omap - - MAM03942c: 1 - - MAM03942e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11712" - name: "Transport of Sphingomyelin (D18:1/20:0), Active" @@ -237247,21 +235434,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11713" - - name: "Transport of Sphingomyelin (D18:1/20:0), Vescicular" - - metabolites: !!omap - - MAM03945c: 1 - - MAM03945e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11714" - name: "Transport of Sphingomyelin (D18:1/20:1), Active" @@ -237282,21 +235454,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11715" - - name: "Transport of Sphingomyelin (D18:1/20:1), Vescicular" - - metabolites: !!omap - - MAM03944c: 1 - - MAM03944e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11716" - name: "Transport of Sphingomyelin (D18:1/21:0), Active" @@ -237317,21 +235474,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11717" - - name: "Transport of Sphingomyelin (D18:1/21:0), Vescicular" - - metabolites: !!omap - - MAM03946c: 1 - - MAM03946e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11718" - name: "Transport of Sphingomyelin (D18:1/22:0), Active Transport" @@ -237352,21 +235494,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11719" - - name: "Transport of Sphingomyelin (D18:1/22:0), Vescicular Transport" - - metabolites: !!omap - - MAM03948c: 1 - - MAM03948e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11720" - name: "Transport of Sphingomyelin (D18:1/22:1), Active" @@ -237387,21 +235514,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11721" - - name: "Transport of Sphingomyelin (D18:1/22:1), Vescicular" - - metabolites: !!omap - - MAM03947c: 1 - - MAM03947e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11722" - name: "Transport of Sphingomyelin (D18:1/23:0), Active" @@ -237422,21 +235534,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11723" - - name: "Transport of Sphingomyelin (D18:1/23:0), Vescicular" - - metabolites: !!omap - - MAM03949c: 1 - - MAM03949e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11724" - name: "Transport of Sphingomyelin (D18:0/24:0), Active Transport" @@ -237457,21 +235554,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11725" - - name: "Transport of Sphingomyelin (D18:0/24:0), Vescicular Transport" - - metabolites: !!omap - - MAM03950c: 1 - - MAM03950e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11726" - name: "Transport of Sphingomyelin (D18:0/25:0), Active Transport" @@ -237492,28 +235574,13 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11727" - - name: "Transport of Sphingomyelin (D18:0/25:0), Vescicular Transport" - - metabolites: !!omap - - MAM03951c: 1 - - MAM03951e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "PMID:11581500;PMID:10856719" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11728" - name: "Transport of 2-Hydroxy-Isocaproate, Extracellular, Uptake" - metabolites: !!omap - MAM03187c: 1 - MAM03187e: -1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" @@ -237522,21 +235589,6 @@ - subsystem: - "Transport reactions" - confidence_score: 0 - - !!omap - - id: "MAR11729" - - name: "Transport of 2-Hydroxy-Isocaproate, Extracellular, Secretion" - - metabolites: !!omap - - MAM03187c: -1 - - MAM03187e: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11730" - name: "Exchange of 2-Hydroxy-Isocaproate" @@ -241437,7 +239489,7 @@ - metabolites: !!omap - MAM01351c: -1 - MAM01351e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" @@ -241460,28 +239512,13 @@ - subsystem: - "Exchange/demand reactions" - confidence_score: 0 - - !!omap - - id: "MAR11988" - - name: "Transport of Apo B, Extracellular" - - metabolites: !!omap - - MAM01351c: 1 - - MAM01351e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11989" - name: "Transport of Apo C1, Extracellular" - metabolites: !!omap - MAM01353c: -1 - MAM01353e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" @@ -241504,28 +239541,13 @@ - subsystem: - "Exchange/demand reactions" - confidence_score: 0 - - !!omap - - id: "MAR11991" - - name: "Transport of Apo C1, Extracellular" - - metabolites: !!omap - - MAM01353c: 1 - - MAM01353e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11992" - name: "Transport of Apo C2, Extracellular" - metabolites: !!omap - MAM01354c: -1 - MAM01354e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" @@ -241548,28 +239570,13 @@ - subsystem: - "Exchange/demand reactions" - confidence_score: 0 - - !!omap - - id: "MAR11994" - - name: "Transport of Apo C2, Extracellular" - - metabolites: !!omap - - MAM01354c: 1 - - MAM01354e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11995" - name: "Transport of Apo C3, Extracellular" - metabolites: !!omap - MAM01355c: -1 - MAM01355e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" @@ -241592,28 +239599,13 @@ - subsystem: - "Exchange/demand reactions" - confidence_score: 0 - - !!omap - - id: "MAR11997" - - name: "Transport of Apo C3, Extracellular" - - metabolites: !!omap - - MAM01355c: 1 - - MAM01355e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR11998" - name: "Transport of Apo E, Extracellular" - metabolites: !!omap - MAM01359c: -1 - MAM01359e: 1 - - lower_bound: 0 + - lower_bound: -1000 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "" @@ -241636,21 +239628,6 @@ - subsystem: - "Exchange/demand reactions" - confidence_score: 0 - - !!omap - - id: "MAR12000" - - name: "Transport of Apo E, Extracellular" - - metabolites: !!omap - - MAM01359c: 1 - - MAM01359e: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Transport reactions" - - confidence_score: 0 - !!omap - id: "MAR12001" - name: "Dopamine 4-O-Sulfotransferase" @@ -243712,13 +241689,13 @@ - id: "MAR12146" - name: "3-dehydro-chenodehydroxycholic acid formation" - metabolites: !!omap + - MAM01435c: -1 - MAM02039c: -1 - MAM02040c: 2 - MAM02554c: 1 - MAM02555c: -1 - MAM02630c: -1 - MAM03206c: 1 - - MAM03318c: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "cyp-13A1 or cyp-13A10 or cyp-13A11 or cyp-13A2 or cyp-13A3 or cyp-13A4 or cyp-13A5 or cyp-13A6 or cyp-13A7 or cyp-13A8" @@ -244118,9 +242095,9 @@ - id: "MAR12174" - name: "UDP-Glucuronosyltransferase (UGT) cytosolic (chenodeoxycholic acid)" - metabolites: !!omap + - MAM01435c: -1 - MAM03106c: 1 - MAM03109c: -1 - - MAM03318c: -1 - MAM03508c: 1 - lower_bound: 0 - upper_bound: 1000 @@ -244135,9 +242112,9 @@ - id: "MAR12175" - name: "UDP-Glucuronosyltransferase (UGT) (chenodeoxycholic acid)" - metabolites: !!omap + - MAM01435r: -1 - MAM03106r: 1 - MAM03109r: -1 - - MAM03318r: -1 - MAM03508r: 1 - lower_bound: 0 - upper_bound: 1000 @@ -244187,9 +242164,9 @@ - id: "MAR12178" - name: "UDP-Glucuronosyltransferase (UGT) cytosolic (chenodeoxycholic acid)" - metabolites: !!omap + - MAM01435c: -1 - MAM03106c: 1 - MAM03109c: -1 - - MAM03318c: -1 - MAM03509c: 1 - lower_bound: 0 - upper_bound: 1000 @@ -244204,9 +242181,9 @@ - id: "MAR12179" - name: "UDP-Glucuronosyltransferase (UGT) ER (chenodeoxycholic acid)" - metabolites: !!omap + - MAM01435r: -1 - MAM03106r: 1 - MAM03109r: -1 - - MAM03318r: -1 - MAM03509r: 1 - lower_bound: 0 - upper_bound: 1000 @@ -244273,12 +242250,12 @@ - id: "MAR12183" - name: "Chenodeoxycholic acid 6alpha-hydroxylase" - metabolites: !!omap + - MAM01435c: -1 - MAM02039c: -1 - MAM02040c: 1 - MAM02554c: 1 - MAM02555c: -1 - MAM02630c: -1 - - MAM03318c: -1 - MAM03685c: 1 - lower_bound: 0 - upper_bound: 1000 @@ -247362,7 +245339,7 @@ - MAM03238m: 1 - lower_bound: 0 - upper_bound: 1000 - - gene_reaction_rule: "B0303.3 or acdh-12 or ech-1.1 or ech-1.2" + - gene_reaction_rule: "acdh-12 or ech-1.1 or ech-1.2 or hadb-1" - rxnNotes: "" - eccodes: "1.3.99.-;4.2.1.17;1.1.1.211;2.3.1.16" - references: "PMID:1680649" @@ -247375,12 +245352,12 @@ - metabolites: !!omap - MAM01261x: 2 - MAM01597x: -2 + - MAM01802x: -1 + - MAM01803x: 2 - MAM02039x: 2 - MAM02040x: -2 - - MAM02041x: 2 - MAM02552x: -2 - MAM02553x: 2 - - MAM02630x: -1 - MAM03236x: -1 - MAM03238x: 1 - lower_bound: 0 @@ -254620,14 +252597,14 @@ - metabolites: !!omap - MAM01261x: 4 - MAM01597x: -4 + - MAM01802x: -2 + - MAM01803x: 2 - MAM02039x: 3 - MAM02040x: -2 - - MAM02041x: 2 - MAM02552x: -4 - MAM02553x: 4 - MAM02554x: 1 - MAM02555x: -1 - - MAM02630x: -2 - MAM03580x: -1 - MAM03893x: 1 - lower_bound: 0 @@ -258638,20 +256615,6 @@ - subsystem: - "Exchange/demand reactions" - confidence_score: 0 - - !!omap - - id: "MAR13064" - - name: "EX_M01268[e]" - - metabolites: !!omap - - MAM01268e: -1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Exchange/demand reactions" - - confidence_score: 0 - !!omap - id: "MAR13065" - name: "EX_HC02080[e]" @@ -258938,20 +256901,6 @@ - subsystem: - "Exchange/demand reactions" - confidence_score: 0 - - !!omap - - id: "MAR10025" - - name: "Exchange of 20-hydroxy-arachidonate" - - metabolites: !!omap - - MAM00591e: -1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "" - - eccodes: "" - - references: "" - - subsystem: - - "Exchange/demand reactions" - - confidence_score: 0 - !!omap - id: "MAR10026" - name: "Exchange of chenodiol" @@ -261219,24 +259168,6 @@ - subsystem: - "Retinol metabolism" - confidence_score: 0 - - !!omap - - id: "MAR20002" - - name: "MAR20002" - - metabolites: !!omap - - MAM02039c: 1 - - MAM02552c: -1 - - MAM02553c: 1 - - MAM02832c: 1 - - MAM02834c: -1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "adh-5" - - rxnNotes: "" - - eccodes: "1.1.1.105" - - references: "" - - subsystem: - - "Retinol metabolism" - - confidence_score: 0 - !!omap - id: "MAR20003" - name: "MAR20003" @@ -262232,22 +260163,6 @@ - subsystem: - "Insect hormone biosynthesis" - confidence_score: 0 - - !!omap - - id: "MAR20066" - - name: "MAR20066" - - metabolites: !!omap - - MAM02040x: 2 - - MAM02041x: -2 - - MAM02630x: 1 - - lower_bound: 0 - - upper_bound: 1000 - - gene_reaction_rule: "ctl-1 or ctl-2 or ctl-3" - - rxnNotes: "" - - eccodes: "1.11.1.6; 1.11.1.21" - - references: "" - - subsystem: - - "Glyoxylate and dicarboxylate metabolism" - - confidence_score: 0 - !!omap - id: "MAR20067" - name: "MAR20067" @@ -262612,6 +260527,57 @@ - subsystem: - "Miscellaneous" - confidence_score: 0 + - !!omap + - id: "MAR20112" + - name: "MAR20112" + - metabolites: !!omap + - MAM01285m: 1 + - MAM01357m: -1 + - MAM01371m: -1 + - MAM02039m: 1 + - MAM02046m: -1 + - MAM02751m: 1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "pod-2" + - rxnNotes: "" + - eccodes: "6.4.1.2" + - references: "PMID:10677481;PMID:16721829;PMID:17126822;PMID:235695;PMID:24055;PMID:6116153;PMID:6116159;PMID:6116163;PMID:6138355;PMID:7732023;PMID:9099716" + - subsystem: + - "Fatty acid biosynthesis (even-chain)" + - confidence_score: 0 + - !!omap + - id: "MAR20113" + - name: "MAR20113" + - metabolites: !!omap + - MAM00185c: -1 + - MAM00185m: 1 + - lower_bound: -1000 + - upper_bound: 1000 + - gene_reaction_rule: "" + - rxnNotes: "" + - eccodes: "" + - references: "" + - subsystem: + - "Transport reactions" + - confidence_score: 0 + - !!omap + - id: "MAR20114" + - name: "MAR20014" + - metabolites: !!omap + - MAM01802x: 1 + - MAM01803x: -1 + - MAM02041x: 1 + - MAM02630x: -1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "C15B12.1 or acox-1.1 or acox-1.2 or acox-1.3 or acox-1.4 or acox-3 or amx-3 or daao-1 or hpo-15 or xdh-1" + - rxnNotes: "" + - eccodes: "" + - references: "PMID:30378035" + - subsystem: + - "Miscellaneous" + - confidence_score: 0 - !!omap - id: "MAR15001" - name: "" @@ -263689,6 +261655,21 @@ - subsystem: - "Fatty acid elongation (even-chain)" - confidence_score: 2 + - !!omap + - id: "MAR00443" + - name: "3-Beta-Hydroxysteroid-Delta (8), Delta (7)-Isomerase" + - metabolites: !!omap + - MAM01066r: 1 + - MAM03158r: -1 + - lower_bound: 0 + - upper_bound: 1000 + - gene_reaction_rule: "" + - rxnNotes: "reaction added by gap filling" + - eccodes: "5.3.3.5" + - references: "PMID:10391219" + - subsystem: + - "Cholesterol metabolism" + - confidence_score: 0 - !!omap - id: "MAR01498" - name: "Lanosterol Synthase" @@ -263705,16 +261686,16 @@ - "Cholesterol metabolism" - confidence_score: 0 - !!omap - - id: "MAR01510" + - id: "MAR01508" - name: "Lathosterol Oxidase" - metabolites: !!omap + - MAM01066r: -1 + - MAM01189r: 1 - MAM02039r: -1 - MAM02040r: 2 - - MAM02343r: -1 - MAM02554r: 1 - MAM02555r: -1 - MAM02630r: -1 - - MAM02805r: 1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "" @@ -263784,21 +261765,6 @@ - subsystem: - "Cholesterol metabolism" - confidence_score: 0 - - !!omap - - id: "MAR02339" - - name: "5Alpha-Cholest-7-En-3Beta-Ol Delta7-Delta8-Isomerase" - - metabolites: !!omap - - MAM01449r: 1 - - MAM02343r: -1 - - lower_bound: -1000 - - upper_bound: 1000 - - gene_reaction_rule: "" - - rxnNotes: "reaction added by gap filling" - - eccodes: "5.3.3.5" - - references: "PMID:10391219;PMID:12133002;PMID:4475632;PMID:5810070" - - subsystem: - - "Cholesterol metabolism" - - confidence_score: 0 - !!omap - id: "MAR05151" - name: "" @@ -264018,20 +261984,20 @@ - "Cysteine and methionine metabolism" - confidence_score: 0 - !!omap - - id: "MAR04262" - - name: "nicotinamide-D-ribonucleotide:diphosphate phospho-alpha-D-ribosyltransferase" + - id: "MAR04265" + - name: "" - metabolites: !!omap - - MAM02039c: -1 + - MAM01285c: 1 + - MAM01371c: -1 + - MAM02039c: 1 - MAM02581c: 1 - - MAM02583c: -1 - - MAM02759c: 1 - - MAM02806c: -1 + - MAM02582c: -1 - lower_bound: 0 - upper_bound: 1000 - gene_reaction_rule: "" - rxnNotes: "reaction added by gap filling" - - eccodes: "2.4.2.12" - - references: "PMID:12555668;PMID:1443581;PMID:14612543;PMID:4344987;PMID:6176238" + - eccodes: "2.7.1.22" + - references: "" - subsystem: - "Nicotinate and nicotinamide metabolism" - confidence_score: 0 @@ -264537,12 +262503,6 @@ - !!omap - id: "B0272.4" - name: "B0272.4" - - !!omap - - id: "B0281.8" - - name: "B0281.8" - - !!omap - - id: "B0303.3" - - name: "B0303.3" - !!omap - id: "B0395.3" - name: "B0395.3" @@ -264621,9 +262581,6 @@ - !!omap - id: "C18B12.4" - name: "C18B12.4" - - !!omap - - id: "C18E9.4" - - name: "C18E9.4" - !!omap - id: "C24A3.4" - name: "C24A3.4" @@ -264636,9 +262593,6 @@ - !!omap - id: "C25H3.3" - name: "C25H3.3" - - !!omap - - id: "C25H3.9" - - name: "C25H3.9" - !!omap - id: "C26D10.4" - name: "C26D10.4" @@ -264657,9 +262611,6 @@ - !!omap - id: "C29F7.3" - name: "C29F7.3" - - !!omap - - id: "C31C9.2" - - name: "C31C9.2" - !!omap - id: "C31H1.5" - name: "C31H1.5" @@ -264672,18 +262623,12 @@ - !!omap - id: "C32F10.8" - name: "C32F10.8" - - !!omap - - id: "C33A12.1" - - name: "C33A12.1" - !!omap - id: "C33F10.14" - name: "C33F10.14" - !!omap - id: "C33G3.4" - name: "C33G3.4" - - !!omap - - id: "C34B2.8" - - name: "C34B2.8" - !!omap - id: "C35A11.4" - name: "C35A11.4" @@ -264714,9 +262659,6 @@ - !!omap - id: "C50D2.7" - name: "C50D2.7" - - !!omap - - id: "C50D2.9" - - name: "C50D2.9" - !!omap - id: "C50F4.16" - name: "C50F4.16" @@ -264756,9 +262698,6 @@ - !!omap - id: "D2023.4" - name: "D2023.4" - - !!omap - - id: "D2030.4" - - name: "D2030.4" - !!omap - id: "D2045.9" - name: "D2045.9" @@ -264822,9 +262761,6 @@ - !!omap - id: "F13G3.6" - name: "F13G3.6" - - !!omap - - id: "F13H8.9" - - name: "F13H8.9" - !!omap - id: "F19B6.1" - name: "F19B6.1" @@ -264957,9 +262893,6 @@ - !!omap - id: "F42F12.4" - name: "F42F12.4" - - !!omap - - id: "F42G8.10" - - name: "F42G8.10" - !!omap - id: "F43C11.7" - name: "F43C11.7" @@ -264972,15 +262905,9 @@ - !!omap - id: "F44G3.2" - name: "F44G3.2" - - !!omap - - id: "F44G4.2" - - name: "F44G4.2" - !!omap - id: "F45H10.2" - name: "F45H10.2" - - !!omap - - id: "F45H10.3" - - name: "F45H10.3" - !!omap - id: "F46F11.1" - name: "F46F11.1" @@ -265005,12 +262932,6 @@ - !!omap - id: "F52C9.3" - name: "F52C9.3" - - !!omap - - id: "F53C11.3" - - name: "F53C11.3" - - !!omap - - id: "F53F4.10" - - name: "F53F4.10" - !!omap - id: "F54D5.7" - name: "F54D5.7" @@ -265038,9 +262959,6 @@ - !!omap - id: "F59B2.3" - name: "F59B2.3" - - !!omap - - id: "F59C6.5" - - name: "F59C6.5" - !!omap - id: "H10E21.5" - name: "H10E21.5" @@ -265212,24 +263130,15 @@ - !!omap - id: "T12B3.3" - name: "T12B3.3" - - !!omap - - id: "T13C2.6" - - name: "T13C2.6" - !!omap - id: "T13C5.6" - name: "T13C5.6" - - !!omap - - id: "T19B4.3" - - name: "T19B4.3" - !!omap - id: "T20B3.1" - name: "T20B3.1" - !!omap - id: "T20D3.6" - name: "T20D3.6" - - !!omap - - id: "T20H4.5" - - name: "T20H4.5" - !!omap - id: "T22B7.3" - name: "T22B7.3" @@ -265392,30 +263301,18 @@ - !!omap - id: "Y51A2D.1" - name: "Y51A2D.1" - - !!omap - - id: "Y51H1A.3" - - name: "Y51H1A.3" - !!omap - id: "Y53F4B.18" - name: "Y53F4B.18" - !!omap - id: "Y53G8AR.5" - name: "Y53G8AR.5" - - !!omap - - id: "Y54E10BR.3" - - name: "Y54E10BR.3" - - !!omap - - id: "Y54F10AM.5" - - name: "Y54F10AM.5" - !!omap - id: "Y54G2A.18" - name: "Y54G2A.18" - !!omap - id: "Y55D5A.3" - name: "Y55D5A.3" - - !!omap - - id: "Y56A3A.19" - - name: "Y56A3A.19" - !!omap - id: "Y57A10A.31" - name: "Y57A10A.31" @@ -265434,9 +263331,6 @@ - !!omap - id: "Y62E10A.6" - name: "Y62E10A.6" - - !!omap - - id: "Y63D3A.7" - - name: "Y63D3A.7" - !!omap - id: "Y65B4A.8" - name: "Y65B4A.8" @@ -265479,9 +263373,6 @@ - !!omap - id: "Y71H2AM.25" - name: "Y71H2AM.25" - - !!omap - - id: "Y71H2AM.4" - - name: "Y71H2AM.4" - !!omap - id: "Y71H2AM.6" - name: "Y71H2AM.6" @@ -265512,9 +263403,6 @@ - !!omap - id: "Y92H12BL.5" - name: "Y92H12BL.5" - - !!omap - - id: "Y94H6A.8" - - name: "Y94H6A.8" - !!omap - id: "ZC155.4" - name: "ZC155.4" @@ -265530,9 +263418,6 @@ - !!omap - id: "ZC434.8" - name: "ZC434.8" - - !!omap - - id: "ZC513.2" - - name: "ZC513.2" - !!omap - id: "ZC8.6" - name: "ZC8.6" @@ -265557,9 +263442,6 @@ - !!omap - id: "ZK370.4" - name: "ZK370.4" - - !!omap - - id: "ZK550.3" - - name: "ZK550.3" - !!omap - id: "ZK550.6" - name: "ZK550.6" @@ -265956,6 +263838,9 @@ - !!omap - id: "apg-1" - name: "apg-1" + - !!omap + - id: "aprt-1" + - name: "aprt-1" - !!omap - id: "apy-1" - name: "apy-1" @@ -266547,6 +264432,9 @@ - !!omap - id: "ddx-19" - name: "ddx-19" + - !!omap + - id: "decr-1.1" + - name: "decr-1.1" - !!omap - id: "decr-1.2" - name: "decr-1.2" @@ -266709,9 +264597,6 @@ - !!omap - id: "drp-1" - name: "drp-1" - - !!omap - - id: "dsc-4" - - name: "dsc-4" - !!omap - id: "dtmk-1" - name: "dtmk-1" @@ -266772,6 +264657,9 @@ - !!omap - id: "eel-1" - name: "eel-1" + - !!omap + - id: "eelo-2" + - name: "eelo-2" - !!omap - id: "egl-8" - name: "egl-8" @@ -266862,15 +264750,15 @@ - !!omap - id: "fce-1" - name: "fce-1" + - !!omap + - id: "fdgt-1" + - name: "fdgt-1" - !!omap - id: "fdps-1" - name: "fdps-1" - !!omap - id: "fecl-1" - name: "fecl-1" - - !!omap - - id: "fgt-1" - - name: "fgt-1" - !!omap - id: "figo-1" - name: "figo-1" @@ -266988,9 +264876,6 @@ - !!omap - id: "gei-1" - name: "gei-1" - - !!omap - - id: "gei-8" - - name: "gei-8" - !!omap - id: "ger-1" - name: "ger-1" @@ -267015,6 +264900,9 @@ - !!omap - id: "gldc-1" - name: "gldc-1" + - !!omap + - id: "gldi-2" + - name: "gldi-2" - !!omap - id: "gln-3" - name: "gln-3" @@ -267156,12 +265044,6 @@ - !!omap - id: "gro-1" - name: "gro-1" - - !!omap - - id: "gsp-1" - - name: "gsp-1" - - !!omap - - id: "gsp-2" - - name: "gsp-2" - !!omap - id: "gspd-1" - name: "gspd-1" @@ -267228,6 +265110,9 @@ - !!omap - id: "hacl-1" - name: "hacl-1" + - !!omap + - id: "hadb-1" + - name: "hadb-1" - !!omap - id: "haly-1" - name: "haly-1" @@ -267240,9 +265125,6 @@ - !!omap - id: "hat-1" - name: "hat-1" - - !!omap - - id: "hda-2" - - name: "hda-2" - !!omap - id: "hecd-1" - name: "hecd-1" @@ -267435,9 +265317,6 @@ - !!omap - id: "kcc-2" - name: "kcc-2" - - !!omap - - id: "kin-1" - - name: "kin-1" - !!omap - id: "klo-1" - name: "klo-1" @@ -267597,6 +265476,9 @@ - !!omap - id: "mca-3" - name: "mca-3" + - !!omap + - id: "mcat-1" + - name: "mcat-1" - !!omap - id: "mccc-1" - name: "mccc-1" @@ -267621,6 +265503,12 @@ - !!omap - id: "mdh-2" - name: "mdh-2" + - !!omap + - id: "mec-10" + - name: "mec-10" + - !!omap + - id: "mec-4" + - name: "mec-4" - !!omap - id: "mecr-1" - name: "mecr-1" @@ -267786,6 +265674,9 @@ - !!omap - id: "nath-10" - name: "nath-10" + - !!omap + - id: "nca-2" + - name: "nca-2" - !!omap - id: "nceh-1" - name: "nceh-1" @@ -267810,9 +265701,54 @@ - !!omap - id: "ncx-9" - name: "ncx-9" + - !!omap + - id: "ndab-1" + - name: "ndab-1" - !!omap - id: "ndk-1" - name: "ndk-1" + - !!omap + - id: "ndua-12" + - name: "ndua-12" + - !!omap + - id: "ndua-13" + - name: "ndua-13" + - !!omap + - id: "ndua-2" + - name: "ndua-2" + - !!omap + - id: "ndua-5" + - name: "ndua-5" + - !!omap + - id: "ndua-7" + - name: "ndua-7" + - !!omap + - id: "ndua-8" + - name: "ndua-8" + - !!omap + - id: "ndub-10" + - name: "ndub-10" + - !!omap + - id: "ndub-11" + - name: "ndub-11" + - !!omap + - id: "ndub-2" + - name: "ndub-2" + - !!omap + - id: "ndub-3" + - name: "ndub-3" + - !!omap + - id: "ndub-5" + - name: "ndub-5" + - !!omap + - id: "ndub-7" + - name: "ndub-7" + - !!omap + - id: "ndub-8" + - name: "ndub-8" + - !!omap + - id: "nduc-2" + - name: "nduc-2" - !!omap - id: "nduf-2.2" - name: "nduf-2.2" @@ -267828,6 +265764,12 @@ - !!omap - id: "nduf-9" - name: "nduf-9" + - !!omap + - id: "ndus-8" + - name: "ndus-8" + - !!omap + - id: "nduv-2" + - name: "nduv-2" - !!omap - id: "ndx-2" - name: "ndx-2" @@ -267843,15 +265785,6 @@ - !!omap - id: "nex-3" - name: "nex-3" - - !!omap - - id: "nhr-2" - - name: "nhr-2" - - !!omap - - id: "nhr-23" - - name: "nhr-23" - - !!omap - - id: "nhr-85" - - name: "nhr-85" - !!omap - id: "nhx-2" - name: "nhx-2" @@ -268209,6 +266142,9 @@ - !!omap - id: "pgs-1" - name: "pgs-1" + - !!omap + - id: "phdh-1" + - name: "phdh-1" - !!omap - id: "phip-1" - name: "phip-1" @@ -268479,9 +266415,6 @@ - !!omap - id: "rga-8" - name: "rga-8" - - !!omap - - id: "rgl-1" - - name: "rgl-1" - !!omap - id: "rhr-1" - name: "rhr-1" @@ -268500,6 +266433,9 @@ - !!omap - id: "rml-1" - name: "rml-1" + - !!omap + - id: "rnf-126" + - name: "rnf-126" - !!omap - id: "rnf-5" - name: "rnf-5" @@ -268605,9 +266541,6 @@ - !!omap - id: "sars-1" - name: "sars-1" - - !!omap - - id: "sbp-1" - - name: "sbp-1" - !!omap - id: "sca-1" - name: "sca-1" @@ -268621,11 +266554,8 @@ - id: "scl-1" - name: "scl-1" - !!omap - - id: "scl-20" - - name: "scl-20" - - !!omap - - id: "scl-3" - - name: "scl-3" + - id: "scly-1" + - name: "scly-1" - !!omap - id: "scpl-3" - name: "scpl-3" @@ -268692,9 +266622,6 @@ - !!omap - id: "set-9" - name: "set-9" - - !!omap - - id: "sex-1" - - name: "sex-1" - !!omap - id: "sfxn-1.5" - name: "sfxn-1.5" @@ -268707,9 +266634,6 @@ - !!omap - id: "sig-7" - name: "sig-7" - - !!omap - - id: "sin-3" - - name: "sin-3" - !!omap - id: "sir-2.1" - name: "sir-2.1" @@ -268980,9 +266904,6 @@ - !!omap - id: "tdo-2" - name: "tdo-2" - - !!omap - - id: "tgs-1" - - name: "tgs-1" - !!omap - id: "tgt-1" - name: "tgt-1" @@ -269022,6 +266943,9 @@ - !!omap - id: "tres-1" - name: "tres-1" + - !!omap + - id: "trim-21" + - name: "trim-21" - !!omap - id: "trm-1" - name: "trm-1" diff --git a/model/dependencies.txt b/model/dependencies.txt index aba56d2..0d92e48 100644 --- a/model/dependencies.txt +++ b/model/dependencies.txt @@ -2,4 +2,4 @@ MATLAB 9.10.0.1602886 (R2021a) libSBML 5.19.0 RAVEN_toolbox 2.7.6 COBRA_toolbox 3.4.0 -Human-GEM 1.16.0 +Human-GEM 1.17.0 diff --git a/model/metabolites.tsv b/model/metabolites.tsv index 43c2a3b..10024d7 100644 --- a/model/metabolites.tsv +++ b/model/metabolites.tsv @@ -75,8 +75,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00026m" "" "" "CE6186" "" "m00026m" "" "" "" "MNXM33779" "" "CE6186" "m00026m" "MAM00026" "MAM00026x" "" "" "CE6186" "" "m00026p" "" "" "" "MNXM33779" "" "CE6186" "m00026p" "MAM00026" "MAM00027x" "" "" "CE6191" "" "m00027p" "" "" "" "MNXM33780" "53481494" "CE6191" "m00027p" "MAM00027" -"MAM00028c" "" "CHEBI:81563" "CE7090" "" "m00028c" "" "" "" "MNXM33782" "16061126" "CE7090" "m00028c" "MAM00028" -"MAM00029c" "" "CHEBI:81563" "CE7090" "" "m00029c" "" "" "LMFA03070025" "MNXM33782" "16061126" "CE7090" "m00029c" "MAM00029" +"MAM00028c" "" "CHEBI:81563" "CE7090" "" "m00028c" "" "" "" "MNXM33782" "16061126" "CE7090" "m00028c;MAM00029c" "MAM00028" "MAM00030c" "" "CHEBI:82558" "" "" "m00030c" "" "C19559" "" "MNXM13488" "" "M00030" "m00030c" "MAM00030" "MAM00031c" "" "CHEBI:33995" "" "" "m00031c" "" "C14791" "" "MNXM6499" "" "M00031" "m00031c" "MAM00031" "MAM00032c" "onpthl" "CHEBI:33998" "" "" "m00032c" "" "C14786" "" "MNXM12425;MNXM3390" "108063" "onpthl" "m00032c" "MAM00032" @@ -86,7 +85,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00035c" "2425dhvitd3" "CHEBI:28818" "" "" "m00035c" "" "C07712" "LMST03020273" "MNXM6763" "" "2425dhvitd3" "m00035c" "MAM00035" "MAM00035m" "2425dhvitd3" "CHEBI:28818" "" "" "m00035m" "" "C07712" "LMST03020273" "MNXM6763" "" "2425dhvitd3" "m00035m" "MAM00035" "MAM00035e" "2425dhvitd3" "CHEBI:28818" "" "" "m00035s" "" "C07712" "LMST03020273" "MNXM6763" "" "2425dhvitd3" "m00035s" "MAM00035" -"MAM00036m" "" "CHEBI:52050" "CE5168" "" "m00036m" "" "C05450" "" "MNXM732;MNXM827" "46224537" "HC01459" "m00036m" "MAM00036" "MAM00036x" "" "CHEBI:52050" "CE5168" "" "m00036p" "" "C05450" "" "MNXM732;MNXM827" "46224537" "HC01459" "m00036p" "MAM00036" "MAM00037x" "thcholoylcoa" "CHEBI:27403" "" "" "m00037p" "" "C05448" "" "MNXM165175;MNXM3395;MNXM560" "46224536" "thcholoylcoa" "m00037p" "MAM00037" "MAM00038c" "" "" "" "" "m00038c" "HC01597" "C05754" "" "MNXM28221" "" "HC01597" "m00038c" "MAM00038" @@ -119,9 +117,9 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00054m" "" "" "" "" "m00054m" "" "" "" "" "" "M00054" "m00054m" "MAM00054" "MAM00055c" "" "" "" "" "m00055c" "" "" "" "" "" "M00055" "m00055c" "MAM00055" "MAM00056m" "" "CHEBI:76292" "" "" "m00056m" "" "" "" "MNXM170116" "" "M00056" "m00056m" "MAM00056" -"MAM00057c" "od2coa" "CHEBI:50570" "" "HMDB0006529" "m00057c" "" "C16218" "LMFA07050055" "MNXM954" "53477850" "od2coa" "m00057c" "MAM00057" -"MAM00057m" "od2coa" "CHEBI:50570" "" "HMDB0006529" "m00057m" "" "C16218" "LMFA07050055" "MNXM954" "53477850" "od2coa" "m00057m" "MAM00057" -"MAM00057x" "od2coa" "CHEBI:50570" "" "HMDB0006529" "m00057p" "" "C16218" "LMFA07050055" "MNXM954" "53477850" "od2coa" "m00057p" "MAM00057" +"MAM00057c" "od2coa" "CHEBI:50570" "" "HMDB0006529" "m00057c" "" "C16218" "LMFA07050385" "MNXM954" "53477850" "od2coa" "m00057c" "MAM00057" +"MAM00057m" "od2coa" "CHEBI:50570" "" "HMDB0006529" "m00057m" "" "C16218" "LMFA07050385" "MNXM954" "53477850" "od2coa" "m00057m" "MAM00057" +"MAM00057x" "od2coa" "CHEBI:50570" "" "HMDB0006529" "m00057p" "" "C16218" "LMFA07050385" "MNXM954" "53477850" "od2coa" "m00057p" "MAM00057" "MAM00058c" "" "" "" "" "m00058c" "HC01594" "C05751" "" "MNXM23766" "" "HC01594" "m00058c" "MAM00058" "MAM00059m" "" "CHEBI:27537" "" "" "m00059m" "HC01415" "C05276" "LMFA07050024" "MNXM784" "46173358" "HC01415" "m00059m" "MAM00059" "MAM00059x" "" "CHEBI:27537" "" "" "m00059p" "HC01415" "C05276" "LMFA07050024" "MNXM784" "46173358" "HC01415" "m00059p" "MAM00059" @@ -146,7 +144,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00074c" "" "" "CE4835" "" "m00074c" "" "" "" "MNXM145822" "" "CE4835" "m00074c" "MAM00074" "MAM00075x" "" "CHEBI:20067" "CE5126" "" "m00075p" "" "" "LMFA07050065" "MNXM108213;MNXM35866" "" "CE5126" "m00075p" "MAM00075" "MAM00076x" "" "" "CE5936" "" "m00076p" "" "" "" "" "" "CE5936" "m00076p" "MAM00076" -"MAM00078x" "pristcoa" "CHEBI:64039" "CE5125" "" "m00078p" "" "" "LMFA07050064" "MNXM30947" "" "CE5125" "m00078p" "MAM00078" +"MAM00078x" "CE5125" "CHEBI:64039" "CE5125" "" "m00078p" "" "" "LMFA07050064" "MNXM30947" "" "CE5125" "m00078p" "MAM00078" "MAM00079x" "" "" "CE5941" "" "m00079p" "" "" "" "MNXM30996" "53481417" "CE5941" "m00079p" "MAM00079" "MAM00080x" "" "" "CE5935" "" "m00080p" "" "" "" "MNXM30997" "53481419" "CE5935" "m00080p" "MAM00080" "MAM00081m" "" "" "CE2418" "" "m00081m" "" "" "" "MNXM31113" "53481423" "CE2418" "m00081m" "MAM00081" @@ -285,9 +283,9 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00129r" "" "" "" "" "m00129r" "" "" "" "" "" "M00129" "m00129r" "MAM00129" "MAM00130c" "tettet6crn" "" "" "" "m00130c" "" "" "" "MNXM9141" "" "tettet6crn" "m00130c" "MAM00130" "MAM00130r" "tettet6crn" "" "" "" "m00130r" "" "" "" "MNXM9141" "" "tettet6crn" "m00130r" "MAM00130" -"MAM00131c" "tettet6coa" "CHEBI:63548" "CE4837" "HMDB0006516" "m00131c" "" "C16171" "LMFA07050041" "MNXM1512;MNXM5945" "53477846" "tettet6coa" "m00131c" "MAM00131" +"MAM00131c" "CE4837;tettet6coa" "CHEBI:63548" "CE4837" "HMDB0006516" "m00131c" "" "C16171" "LMFA07050041" "MNXM1512;MNXM5945;MNXM165171" "53477846" "CE4837;tettet6coa" "CE4837_c;m00131c;MAM03354c" "MAM00131" "MAM00131x" "tettet6coa" "CHEBI:63548" "CE4837" "HMDB0006516" "m00131p" "" "C16171" "LMFA07050041" "MNXM1512;MNXM5945" "53477846" "tettet6coa" "m00131p" "MAM00131" -"MAM00131r" "tettet6coa" "CHEBI:63548" "CE4837" "HMDB0006516" "m00131r" "" "C16171" "LMFA07050041" "MNXM1512;MNXM5945" "53477846" "tettet6coa" "m00131r" "MAM00131" +"MAM00131r" "CE4837;tettet6coa" "CHEBI:63548" "CE4837" "HMDB0006516" "m00131r" "" "C16171" "LMFA07050041" "MNXM1512;MNXM5945;MNXM165171" "53477846" "CE4837;tettet6coa" "CE4837_r;m00131r;MAM03354r" "MAM00131" "MAM00132c" "tettet6" "" "" "" "m00132c" "" "" "LMFA01030819" "MNXM12999" "152972" "tettet6" "m00132c" "MAM00132" "MAM00132l" "tettet6" "" "" "" "m00132l" "" "" "LMFA01030819" "MNXM12999" "152972" "tettet6" "m00132l" "MAM00132" "MAM00132r" "tettet6" "" "" "" "m00132r" "" "" "LMFA01030819" "MNXM12999" "152972" "tettet6" "m00132r" "MAM00132" @@ -508,7 +506,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00269l" "10fthf7glu" "" "" "" "m00269l" "" "" "" "MNXM5422" "" "10fthf7glu" "m00269l" "MAM00269" "MAM00269m" "10fthf7glu" "" "" "" "m00269m" "" "" "" "MNXM5422" "" "10fthf7glu" "m00269m" "MAM00269" "MAM00269e" "10fthf7glu" "" "" "" "m00269s" "" "" "" "MNXM5422" "" "10fthf7glu" "m00269s" "MAM00269" -"MAM00270c" "wharachd" "CHEBI:34306" "" "" "m00270c" "" "C14748" "" "MNXM22451" "5283157" "wharachd" "m00270c" "MAM00270" +"MAM00270c" "wharachd" "CHEBI:34306" "" "" "m00270c;m00591c" "HC02179" "C14748" "" "MNXM22451;MNXM6760" "5283157" "wharachd" "m00270c;m00591c;MAM00591c" "MAM00270" "MAM00270r" "wharachd" "CHEBI:34306" "" "" "m00270r" "" "C14748" "" "MNXM22451" "5283157" "wharachd" "m00270r" "MAM00270" "MAM00271c" "" "" "CE6447" "" "m00271c" "" "" "" "MNXM163636" "" "CE6447" "m00271c" "MAM00271" "MAM00272c" "" "" "CE6459" "" "m00272c" "" "" "" "MNXM164048" "" "CE6459" "m00272c" "MAM00272" @@ -849,8 +847,8 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00528c" "mi34p" "CHEBI:28858" "" "HMDB0006235" "m00528c" "" "C04063" "" "MNXM163431;MNXM2768" "440211" "mi34p" "m00528c" "MAM00528" "MAM00529c" "mi3p__D" "CHEBI:18169" "" "" "m00529c" "" "C04006" "" "MNXM540" "440194" "mi3p_D" "m00529c" "MAM00529" "MAM00530c" "mi4p__D" "CHEBI:18384" "" "" "m00530c" "" "C03546" "" "MNXM2063" "" "mi4p_D" "m00530c" "MAM00530" -"MAM00531c" "ppmi1346p" "" "" "" "m00531c" "" "C18058" "" "MNXM34087" "890" "ppmi1346p" "m00531c" "MAM00531" -"MAM00531n" "ppmi1346p" "" "" "" "m00531n" "" "C18058" "" "MNXM34087" "890" "ppmi1346p" "m00531n" "MAM00531" +"MAM00531c" "ppmi1346p" "" "" "" "m00531c" "" "C18058" "" "MNXM34087" "96024277" "ppmi1346p" "m00531c" "MAM00531" +"MAM00531n" "ppmi1346p" "" "" "" "m00531n" "" "C18058" "" "MNXM34087" "96024277" "ppmi1346p" "m00531n" "MAM00531" "MAM00532c" "" "" "" "" "m00532c" "" "" "LMGP10060005" "MNXM116015" "" "M00532" "m00532c" "MAM00532" "MAM00533c" "" "" "CE6504" "" "m00533c" "" "" "" "MNXM164037" "" "CE6504" "m00533c" "MAM00533" "MAM00534c" "" "" "CE3481" "" "m00534c" "" "" "" "MNXM32836" "53481443" "CE3481" "m00534c" "MAM00534" @@ -938,8 +936,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00588r" "" "" "CE2056" "" "m00588r" "" "" "" "MNXM35484" "53481509" "CE2056" "m00588r" "MAM00588" "MAM00589c" "" "" "CE6451" "" "m00589c" "" "" "" "MNXM163661" "" "CE6451" "m00589c" "MAM00589" "MAM00590c" "" "" "CE5815" "" "m00590c" "" "" "" "MNXM164163" "" "CE5815" "m00590c" "MAM00590" -"MAM00591c" "" "CHEBI:34306" "" "" "m00591c" "HC02179" "C14748" "" "MNXM6760" "" "" "m00591c" "MAM00591" -"MAM00591e" "" "CHEBI:34306" "" "" "m00591s" "HC02179" "C14748" "" "MNXM6760" "" "" "m00591s" "MAM00591" "MAM00592r" "20ahchsterol" "CHEBI:1296" "" "HMDB0006283" "m00592r" "" "C05500" "LMST01010201" "MNXM164166;MNXM3824" "440711" "20ahchsterol" "m00592r" "MAM00592" "MAM00593c" "" "" "CE6467" "" "m00593c" "" "" "" "MNXM166019" "" "CE6467" "m00593c" "MAM00593" "MAM00594c" "" "" "CE6466" "" "m00594c" "" "" "" "MNXM35491" "53481510" "CE6466" "m00594c" "MAM00594" @@ -979,11 +975,9 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00614r" "dhcholestancoa" "CHEBI:15494" "" "HMDB0002159" "m00614r" "HC01332" "C04644" "LMST01010221" "MNXM162803;MNXM90923" "440420" "dhcholestancoa" "m00614r" "MAM00614" "MAM00615c" "" "" "" "" "m00615c" "" "" "" "MNXM827" "" "M00615" "m00615c" "MAM00615" "MAM00615x" "" "" "" "" "m00615p" "" "" "" "MNXM827" "" "M00615" "m00615p" "MAM00615" -"MAM00616m" "cholcoar" "CHEBI:37642" "CE5165" "" "m00616m" "HC01348" "C15613" "LMST01010218" "MNXM549;MNXM90922;MNXM91096" "15942889" "cholcoar" "m00616m" "MAM00616" "MAM00616x" "cholcoar" "CHEBI:37642" "CE5165" "" "m00616p" "HC01348" "C15613" "LMST01010218" "MNXM549;MNXM90922;MNXM91096" "15942889" "cholcoar" "m00616p" "MAM00616" "MAM00616r" "cholcoar" "CHEBI:37642" "CE5165" "" "m00616r" "HC01348" "C15613" "LMST01010218" "MNXM549;MNXM90922;MNXM91096" "15942889" "cholcoar" "m00616r" "MAM00616" "MAM00617x" "" "" "" "" "m00617p" "" "C17346" "" "MNXM5367" "" "M00617" "m00617p" "MAM00617" -"MAM00618m" "cholcoas" "CHEBI:37643" "CE5166" "" "m00618m" "" "C17343" "" "MNXM1201;MNXM8131" "15942888" "CE5166;cholcoas" "m00618m" "MAM00618" "MAM00618x" "cholcoas" "CHEBI:37643" "CE5166" "" "m00618p" "" "C17343" "" "MNXM1201;MNXM8131" "15942888" "CE5166;cholcoas" "m00618p" "MAM00618" "MAM00619r" "xol25oh" "" "" "" "m00619r" "" "" "LMST01010018" "MNXM852" "65094" "xol25oh" "m00619r" "MAM00619" "MAM00620c" "25hvitd2" "" "" "HMDB0001438" "m00620c" "" "" "" "MNXM4976" "22833566" "25hvitd2" "m00620c" "MAM00620" @@ -1085,7 +1079,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00681c" "" "" "CE4830" "" "m00681c" "" "" "" "MNXM145987;MNXM163157" "" "CE4830" "m00681c" "MAM00681" "MAM00682m" "" "" "CE4795" "" "m00682m" "" "" "" "" "" "CE4795" "m00682m" "MAM00682" "MAM00682x" "" "" "CE4795" "" "m00682p" "" "" "" "" "" "CE4795" "m00682p" "MAM00682" -"MAM00684c" "" "CHEBI:1438" "" "HMDB0001527" "m00684c" "" "C08276" "LMFA01130006" "MNXM2782" "563" "M00684" "m00684c" "MAM00684" +"MAM00684c" "" "CHEBI:1438" "" "HMDB0001527" "m00684c" "" "C08276" "LMFA01130006" "MNXM2782" "563" "M00684" "m00684c;MAM03325c" "MAM00684" "MAM00685x" "" "" "CE5943" "" "m00685p" "" "" "" "" "" "CE5943" "m00685p" "MAM00685" "MAM00686x" "" "" "CE5940" "" "m00686p" "" "" "" "" "" "CE5940" "m00686p" "MAM00686" "MAM00687m" "" "" "CE5968" "" "m00687m" "" "" "" "MNXM161244" "" "CE5968" "m00687m" "MAM00687" @@ -1182,9 +1176,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00745r" "" "CHEBI:28834" "" "HMDB0000626" "m00745r" "" "C04483" "LMST04010040" "MNXM57907" "222528" "dchac" "m00745r" "MAM00745" "MAM00746m" "" "" "" "" "m00746m" "" "" "LMST04030155" "MNXM30747;MNXM36899" "" "M00746" "m00746m" "MAM00746" "MAM00747r" "" "" "CE1274" "" "m00747r" "" "" "" "MNXM151029" "" "CE1274" "m00747r" "MAM00747" -"MAM00748m" "cholcoaone" "CHEBI:27379" "CE5169" "HMDB0006891" "m00748m" "HC01473" "C05467" "LMST01010216" "MNXM162946;MNXM873" "440690" "cholcoaone" "m00748m" "MAM00748" -"MAM00748x" "cholcoaone" "CHEBI:27379" "CE5169" "HMDB0006891" "m00748p" "HC01473" "C05467" "LMST01010216" "MNXM162946;MNXM873" "440690" "cholcoaone" "m00748p" "MAM00748" -"MAM00749m" "cholcoads" "CHEBI:27505" "" "HMDB0006889" "m00749m" "HC01466" "C05460" "LMST01010217" "MNXM162945;MNXM2747" "5280797" "cholcoads" "m00749m" "MAM00749" +"MAM00748x" "cholcoaone" "CHEBI:27379" "CE5169" "HMDB0006891" "m00748p" "HC01473" "C05467" "LMST01010216" "MNXM162946;MNXM873" "440690" "cholcoaone" "m00748p;MAM03368x" "MAM00748" "MAM00749x" "cholcoads" "CHEBI:27505" "" "HMDB0006889" "m00749p" "HC01466" "C05460" "LMST01010217" "MNXM162945;MNXM2747" "5280797" "cholcoads" "m00749p" "MAM00749" "MAM00750c" "thcholst" "CHEBI:48940" "" "" "m00750c" "HC00757" "C01301" "LMST04030164" "MNXM162326;MNXM163900;MNXM867;MNXM90392" "439479" "thcholst" "m00750c" "MAM00750" "MAM00750m" "thcholst" "CHEBI:48940" "" "" "m00750m" "HC00757" "C01301" "LMST04030164" "MNXM162326;MNXM163900;MNXM867;MNXM90392" "439479" "thcholst" "m00750m" "MAM00750" @@ -1203,7 +1195,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00758m" "dhcholestanate" "CHEBI:48467" "" "HMDB0000359" "m00758m" "HC01313" "C04554" "LMST04030066" "MNXM162671;MNXM688" "53477686" "dhcholestanate" "m00758m" "MAM00758" "MAM00758x" "dhcholestanate" "CHEBI:48467" "" "HMDB0000359" "m00758p" "HC01313" "C04554" "LMST04030066" "MNXM162671;MNXM688" "53477686" "dhcholestanate" "m00758p" "MAM00758" "MAM00758r" "dhcholestanate" "CHEBI:48467" "" "HMDB0000359" "m00758r" "HC01313" "C04554" "LMST04030066" "MNXM162671;MNXM688" "53477686" "dhcholestanate" "m00758r" "MAM00758" -"MAM00759c" "" "" "" "" "m00759c" "" "C13712" "LMST02030130" "MNXM3494" "" "M00759" "m00759c" "MAM00759" "MAM00760c" "" "CHEBI:58374" "" "" "m00760c" "" "C05665" "" "MNXM43758" "75" "bamppald" "m00760c" "MAM00760" "MAM00761m" "" "" "CE3038" "" "m00761m" "" "" "" "MNXM6853" "3081084" "CE3038" "m00761m" "MAM00761" "MAM00762g" "cs_hs_linkage" "G00157" "" "" "m00762g" "" "C04903" "" "MNXM147451" "" "cs_hs_linkage" "m00762g" "MAM00762" @@ -1237,7 +1228,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00783c" "" "" "" "" "m00783c" "" "" "" "MNXM1171" "" "M00783" "m00783c" "MAM00783" "MAM00783x" "" "" "" "" "m00783p" "" "" "" "MNXM1171" "" "M00783" "m00783p" "MAM00783" "MAM00784m" "3hmp" "CHEBI:37373" "" "HMDB0000023" "m00784m" "HC00705" "C06001" "" "MNXM396" "440873" "3hmp" "m00784m" "MAM00784" -"MAM00785m" "3hibutcoa" "CHEBI:15481" "" "" "m00785m" "HC01223" "C04047" "" "MNXM1034;MNXM446" "45259165" "HC01223" "m00785m" "MAM00785" +"MAM00785m" "3hibutcoa" "CHEBI:15481" "" "" "m00785m" "HC01223" "C04047" "" "MNXM1034;MNXM446" "45259165" "3hibutcoa;HC01223" "3hibutcoa_m;m00785m;MAM03226m" "MAM00785" "MAM00786c" "3hxkynam" "" "" "" "m00786c" "" "C05636" "" "MNXM36534" "440736" "3hxkynam" "m00786c" "MAM00786" "MAM00787c" "" "" "CE2095" "" "m00787c" "" "" "" "MNXM163184" "" "CE2095" "m00787c" "MAM00787" "MAM00788c" "hLkynr" "CHEBI:17380" "" "HMDB0000732" "m00788c" "HC01079" "C03227" "" "MNXM576" "11811" "hLkynr" "m00788c" "MAM00788" @@ -1386,21 +1377,20 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00890m" "3ohodcoa" "CHEBI:50571" "" "HMDB0006498" "m00890m" "" "C16216" "" "MNXM513" "22833663" "3ohodcoa" "m00890m" "MAM00890" "MAM00890x" "3ohodcoa" "CHEBI:50571" "" "HMDB0006498" "m00890p" "" "C16216" "" "MNXM513" "22833663" "3ohodcoa" "m00890p" "MAM00890" "MAM00891c" "" "" "" "" "m00891c" "HC01593" "C05750" "" "MNXM28031" "" "HC01593" "m00891c" "MAM00891" -"MAM00892m" "" "CHEBI:28264" "" "" "m00892m" "HC01406" "C05267" "LMFA07050016" "MNXM706" "11966162" "HC01406" "m00892m" "MAM00892" -"MAM00892x" "" "CHEBI:28264" "" "" "m00892p" "HC01406" "C05267" "LMFA07050016" "MNXM706" "11966162" "HC01406" "m00892p" "MAM00892" +"MAM00892m" "" "CHEBI:28264" "" "" "m00892m" "HC01406" "C05267" "LMFA07050249" "MNXM706" "11966162" "HC01406" "m00892m" "MAM00892" +"MAM00892x" "" "CHEBI:28264" "" "" "m00892p" "HC01406" "C05267" "LMFA07050249" "MNXM706" "11966162" "HC01406" "m00892p" "MAM00892" "MAM00893m" "" "" "CE5160" "" "m00893m" "HC10858" "" "" "MNXM150997" "" "HC10858" "m00893m" "MAM00893" "MAM00893x" "" "" "CE5160" "" "m00893p" "HC10858" "" "" "MNXM150997" "" "HC10858" "m00893p" "MAM00893" "MAM00894m" "" "" "CE0853" "" "m00894m" "HC10853" "" "" "MNXM166250" "440601" "CE0853;HC10853" "m00894m" "MAM00894" "MAM00894x" "" "" "CE0853" "" "m00894p" "HC10853" "" "" "MNXM166250" "440601" "CE0853;HC10853" "m00894p" "MAM00894" -"MAM00895m" "3ohdcoa" "CHEBI:15491" "" "" "m00895m" "HC01398" "C05259" "LMFA07050016" "MNXM738" "169621" "3ohdcoa" "m00895m" "MAM00895" -"MAM00895x" "3ohdcoa" "CHEBI:15491" "" "" "m00895p" "HC01398" "C05259" "LMFA07050016" "MNXM738" "169621" "3ohdcoa" "m00895p" "MAM00895" +"MAM00895m" "3ohdcoa" "CHEBI:15491" "" "" "m00895m" "HC01398" "C05259" "LMFA07050250" "MNXM738" "169621" "3ohdcoa" "m00895m" "MAM00895" +"MAM00895x" "3ohdcoa" "CHEBI:15491" "" "" "m00895p" "HC01398" "C05259" "LMFA07050250" "MNXM738" "169621" "3ohdcoa" "m00895p" "MAM00895" "MAM00896c" "" "" "" "" "m00896c" "" "" "" "" "" "M00896" "m00896c" "MAM00896" "MAM00897m" "" "" "" "" "m00897m" "" "" "" "" "" "M00897" "m00897m" "MAM00897" "MAM00898c" "" "" "" "" "m00898c" "" "" "" "" "" "M00898" "m00898c" "MAM00898" "MAM00899m" "" "" "" "" "m00899m" "" "" "" "MNXM10118" "" "M00899" "m00899m" "MAM00899" "MAM00900m" "msa" "CHEBI:17960" "" "" "m00900m" "HC00203" "C00222" "" "MNXM244" "868" "msa" "m00900m" "MAM00900" "MAM00901c" "" "" "CE4851" "" "m00901c" "" "" "" "MNXM164265" "" "CE4851" "m00901c" "MAM00901" -"MAM00902c" "" "" "CE4820" "" "m00902c" "" "" "" "MNXM164259" "" "CE4820" "m00902c" "MAM00902" "MAM00903c" "" "" "CE4834" "" "m00903c" "" "" "" "MNXM164266" "" "CE4834" "m00903c" "MAM00903" "MAM00904c" "" "" "CE2253" "" "m00904c" "" "" "" "MNXM36773" "25229583" "CE2253" "m00904c" "MAM00904" "MAM00904x" "" "" "CE2253" "" "m00904p" "" "" "" "MNXM36773" "25229583" "CE2253" "m00904p" "MAM00904" @@ -1438,7 +1428,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00931c" "" "" "" "" "m00931c" "" "C19564" "" "MNXM10159" "" "M00931" "m00931c" "MAM00931" "MAM00932c" "" "" "" "" "m00932c" "" "C16453" "" "MNXM5537" "" "M00932" "m00932c" "MAM00932" "MAM00932e" "" "" "" "" "m00932s" "" "C16453" "" "MNXM5537" "" "M00932" "m00932s" "MAM00932" -"MAM00933c" "dmnoncoa" "" "CE4805" "" "m00933c" "" "" "LMFA07050034" "MNXM37161" "" "CE4805" "m00933c" "MAM00933" +"MAM00933c" "dmnoncoa" "" "CE4805" "" "m00933c" "" "" "LMFA07050034" "MNXM37161;MNXM6100" "" "CE4805;dmnoncoa" "dmnoncoa_c;m00933c;MAM03554c" "MAM00933" "MAM00933m" "dmnoncoa" "" "CE4805" "" "m00933m" "" "" "LMFA07050034" "MNXM37161" "" "CE4805" "m00933m" "MAM00933" "MAM00933x" "dmnoncoa" "" "CE4805" "" "m00933p" "" "" "LMFA07050034" "MNXM37161" "" "CE4805" "m00933p" "MAM00933" "MAM00934m" "" "" "CE4806" "" "m00934m" "" "" "" "MNXM468808" "" "CE4806" "m00934m" "MAM00934" @@ -1659,8 +1649,8 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01087r" "" "" "CE1273" "HMDB0002208" "m01087r" "" "" "LMST04030177" "MNXM163691" "6453659" "CE1273" "m01087r" "MAM01087" "MAM01088r" "" "" "CE1278" "HMDB0002180" "m01088r" "" "" "LMST04030016" "MNXM164360" "5284194" "CE1278" "m01088r" "MAM01088" "MAM01089r" "" "" "CE1272" "HMDB0000524" "m01089r" "" "" "LMST04030031" "MNXM29720" "53477712" "CE1272" "m01089r" "MAM01089" -"MAM01090c" "xoltetrol" "CHEBI:17278" "" "HMDB0001231" "m01090c" "HC01455" "C05446" "LMST04030014" "MNXM163006" "193321" "xoltetrol" "m01090c" "MAM01090" -"MAM01090m" "xoltetrol" "CHEBI:17278" "" "HMDB0001231" "m01090m" "HC01455" "C05446" "LMST04030014" "MNXM163006" "193321" "xoltetrol" "m01090m" "MAM01090" +"MAM01090c" "xoltetrol" "CHEBI:17278" "" "HMDB0006264" "m01090c" "HC01455" "C05446" "LMST04030014" "MNXM163006" "193321" "xoltetrol" "m01090c" "MAM01090" +"MAM01090m" "xoltetrol" "CHEBI:17278" "" "HMDB0006264" "m01090m" "HC01455" "C05446" "LMST04030014" "MNXM163006" "193321" "xoltetrol" "m01090m" "MAM01090" "MAM01091c" "" "" "CE4874" "" "m01091c" "" "" "" "MNXM163692" "" "CE4874" "m01091c" "MAM01091" "MAM01091m" "" "" "CE4874" "" "m01091m" "" "" "" "MNXM163692" "" "CE4874" "m01091m" "MAM01091" "MAM01092c" "" "CHEBI:17278" "CE0232" "HMDB0001231" "m01092c" "" "C05446" "" "MNXM162569" "193321" "M01092" "m01092c" "MAM01092" @@ -1713,7 +1703,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01122m" "" "" "CE5342" "" "m01122m" "" "" "" "MNXM162806" "" "CE5342" "m01122m" "MAM01122" "MAM01122x" "" "" "CE5342" "" "m01122p" "" "" "" "MNXM162806" "" "CE5342" "m01122p" "MAM01122" "MAM01122r" "" "" "CE5342" "" "m01122r" "" "" "" "MNXM162806" "" "CE5342" "m01122r" "MAM01122" -"MAM01123c" "" "" "CE2084" "" "m01123c" "" "" "" "MNXM162741" "" "CE7097" "m01123c" "MAM01123" +"MAM01123c" "" "" "CE7097" "" "m01123c" "" "" "" "MNXM162741" "" "CE7097" "m01123c" "MAM01123" "MAM01124c" "" "" "CE5178" "" "m01124c" "" "" "" "MNXM38280" "53481526" "CE5178" "m01124c" "MAM01124" "MAM01124m" "" "" "CE5178" "" "m01124m" "" "" "" "MNXM38280" "53481526" "CE5178" "m01124m" "MAM01124" "MAM01124x" "" "" "CE5178" "" "m01124p" "" "" "" "MNXM38280" "53481526" "CE5178" "m01124p" "MAM01124" @@ -1861,7 +1851,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01227m" "" "" "CE5719" "" "m01227m" "" "" "" "MNXM39477" "" "CE5719" "m01227m" "MAM01227" "MAM01228m" "" "" "CE5847" "" "m01228m" "" "" "" "MNXM39478" "" "CE5847" "m01228m" "MAM01228" "MAM01229c" "" "" "CE3136" "" "m01229c" "" "" "" "MNXM166718" "" "CE3136" "m01229c" "MAM01229" -"MAM01230c" "retinal_cis_9" "" "CE5575" "" "m01230c" "" "" "" "MNXM162775;MNXM2209" "638015" "retinal_cis_9" "m01230c" "MAM01230" +"MAM01230c" "retinal_cis_9" "" "CE5575" "" "m01230c" "" "" "" "MNXM162775;MNXM2209" "6436082" "retinal_cis_9" "m01230c" "MAM01230" "MAM01230r" "retinal_cis_9" "" "CE5575" "" "m01230r" "" "" "" "MNXM162775;MNXM2209" "638015" "retinal_cis_9" "m01230r" "MAM01230" "MAM01231c" "" "" "CE1617" "" "m01231c" "" "" "" "MNXM10472" "449171" "CE1617" "m01231c" "MAM01231" "MAM01231r" "" "" "CE1617" "" "m01231r" "" "" "" "MNXM10472" "449171" "CE1617" "m01231r" "MAM01231" @@ -1938,12 +1928,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01265m" "prpncoa" "CHEBI:15513" "" "" "m01265m" "HC00579" "C00894" "" "MNXM650" "439340" "prpncoa" "m01265m" "MAM01265" "MAM01266c" "" "" "" "" "m01266c" "HC01797" "C10905" "" "MNXM2964" "" "HC01797" "m01266c" "MAM01266" "MAM01267c" "" "" "" "" "m01267c" "HC02116" "" "" "MNXM166880" "" "HC02116" "m01267c" "MAM01267" -"MAM01268c" "" "" "" "" "m01268c" "" "" "PROTEIN" "" "" "M01268" "m01268c" "MAM01268" -"MAM01268m" "" "" "" "" "m01268m" "" "" "PROTEIN" "" "" "M01268" "m01268m" "MAM01268" -"MAM01268n" "" "" "" "" "m01268n" "" "" "PROTEIN" "" "" "M01268" "m01268n" "MAM01268" -"MAM01268x" "" "" "" "" "m01268p" "" "" "PROTEIN" "" "" "M01268" "m01268p" "MAM01268" -"MAM01268r" "" "" "" "" "m01268r" "" "" "PROTEIN" "" "" "M01268" "m01268r" "MAM01268" -"MAM01268e" "" "" "" "" "m01268s" "" "" "PROTEIN" "" "" "M01268" "m01268s" "MAM01268" "MAM01269c" "" "" "" "" "m01269c" "HC02082" "" "" "" "" "HC02082" "m01269c" "MAM01269" "MAM01270c" "" "" "" "" "m01270c" "HC02089" "" "" "" "" "HC02089" "m01270c" "MAM01270" "MAM01271c" "" "" "" "" "m01271c" "HC02044" "" "" "" "" "HC02044" "m01271c" "MAM01271" @@ -2025,7 +2009,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01311x" "akgp_hs" "CHEBI:17197" "" "" "m01311p" "" "C03715" "" "MNXM9595" "" "akgp_hs" "m01311p" "MAM01311" "MAM01312c" "" "CHEBI:30837" "" "HMDB0001209" "m01312c" "" "C00499" "" "MNXM584" "203" "alltt" "m01312c" "MAM01312" "MAM01313c" "" "CHEBI:15676" "" "HMDB0000462" "m01313c" "" "C01551" "" "MNXM612" "204" "alltn" "m01313c" "MAM01313" -"MAM01314c" "" "CHEBI:50169" "CE2211" "HMDB0001449" "m01314c" "" "C13712" "LMST02030130" "MNXM3494" "92786" "CE2211" "m01314c" "MAM01314" +"MAM01314c" "" "CHEBI:50169" "CE2211" "HMDB0001449" "m01314c" "" "C13712" "LMST02030130" "MNXM3494" "92786" "CE2211" "m01314c;MAM00759c" "MAM01314" "MAM01315c" "" "CHEBI:730073" "CE0074" "HMDB0002818" "m01315c" "" "C07599" "" "MNXM15828" "5781" "CE0074" "m01315c" "MAM01315" "MAM01315e" "" "CHEBI:730073" "CE0074" "HMDB0002818" "m01315s" "" "C07599" "" "MNXM15828" "5781" "CE0074" "m01315s" "MAM01315" "MAM01316c" "decdp" "" "" "" "m01316c" "" "" "" "MNXM1721" "" "decdp" "m01316c" "MAM01316" @@ -2034,7 +2018,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01319c" "" "" "" "" "m01319c" "" "C19581" "" "MNXM10644" "" "M01319" "m01319c" "MAM01319" "MAM01320c" "" "" "" "" "m01320c" "" "C19580" "" "MNXM10645" "" "M01320" "m01320c" "MAM01320" "MAM01321c" "" "" "CE5853" "" "m01321c" "" "" "" "MNXM15963" "" "CE5853" "m01321c" "MAM01321" -"MAM01322c" "gal1p" "CHEBI:17973" "" "" "m01322c" "" "C03384" "" "MNXM336" "123912" "gal1p" "m01322c" "MAM01322" +"MAM01322c" "gal1p" "CHEBI:17973" "" "" "m01322c" "" "C00446" "" "MNXM336" "123912" "gal1p" "m01322c" "MAM01322" "MAM01323c" "m1mpdol__L" "CHEBI:28067" "" "" "m01323c" "" "C05861" "" "MNXM148043" "" "m1mpdol_L" "m01323c" "MAM01323" "MAM01324c" "acgagbside_hs" "" "" "" "m01324c" "" "" "" "MNXM7051" "" "acgagbside_hs" "m01324c" "MAM01324" "MAM01324g" "acgagbside_hs" "" "" "" "m01324g" "" "" "" "MNXM7051" "" "acgagbside_hs" "m01324g" "MAM01324" @@ -2231,6 +2215,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01420c" "cbp" "CHEBI:17672" "" "" "m01420c" "HC00164" "C00169" "" "MNXM138" "278" "cbp" "m01420c" "MAM01420" "MAM01420r" "cbp" "CHEBI:17672" "" "" "m01420r" "HC00164" "C00169" "" "MNXM138" "278" "cbp" "m01420r" "MAM01420" "MAM01422c" "cbtnCCP" "" "" "" "m01422c" "" "C04419" "" "MNXM5655" "" "" "m01422c" "MAM01422" +"MAM01422m" "cbtnCCP" "" "" "" "" "" "C04419" "" "MNXM5655" "" "" "" "MAM01422" "MAM01423c" "carn" "CHEBI:15727" "" "HMDB0000033" "m01423c" "HC00321" "C00386" "" "MNXM114412;MNXM1419" "439224" "carn" "m01423c" "MAM01423" "MAM01424c" "cdp" "CHEBI:17239" "" "" "m01424c" "HC00110" "C00112" "" "MNXM220" "6132" "cdp" "m01424c" "MAM01424" "MAM01424m" "cdp" "CHEBI:17239" "" "" "m01424m" "HC00110" "C00112" "" "MNXM220" "6132" "cdp" "m01424m" "MAM01424" @@ -2260,10 +2245,10 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01434c" "dcholcoa" "CHEBI:28701" "" "HMDB0006292" "m01434c" "HC01426" "C05337" "" "MNXM834" "11953854" "dcholcoa" "m01434c" "MAM01434" "MAM01434x" "dcholcoa" "CHEBI:28701" "" "HMDB0006292" "m01434p" "HC01426" "C05337" "" "MNXM834" "11953854" "dcholcoa" "m01434p" "MAM01434" "MAM01434r" "dcholcoa" "CHEBI:28701" "" "HMDB0006292" "m01434r" "HC01426" "C05337" "" "MNXM834" "11953854" "dcholcoa" "m01434r" "MAM01434" -"MAM01435c" "" "CHEBI:16755" "" "HMDB0000518" "m01435c" "HC00958" "C02528" "LMST04010032" "MNXM1183" "10133" "HC00958" "m01435c" "MAM01435" +"MAM01435c" "" "CHEBI:16755" "" "HMDB0000518" "m01435c" "HC00958" "C02528" "LMST04010032" "MNXM1183" "10133" "HC00958" "m01435c;MAM03318c" "MAM01435" "MAM01435x" "" "CHEBI:16755" "" "HMDB0000518" "m01435p" "HC00958" "C02528" "LMST04010032" "MNXM1183" "10133" "HC00958" "m01435p" "MAM01435" -"MAM01435r" "" "CHEBI:16755" "" "HMDB0000518" "m01435r" "HC00958" "C02528" "LMST04010032" "MNXM1183" "10133" "HC00958" "m01435r" "MAM01435" -"MAM01435e" "" "CHEBI:16755" "" "HMDB0000518" "m01435s" "HC00958" "C02528" "LMST04010032" "MNXM1183" "10133" "HC00958" "m01435s" "MAM01435" +"MAM01435r" "" "CHEBI:16755" "" "HMDB0000518" "m01435r" "HC00958" "C02528" "LMST04010032" "MNXM1183" "10133" "HC00958" "m01435r;MAM03318r" "MAM01435" +"MAM01435e" "C02528" "CHEBI:16755" "" "HMDB0000518" "m01435s" "HC00958" "C02528" "LMST04010032" "MNXM1183" "10133" "C02528;HC00958" "C02528_s;m01435s;MAM03318e" "MAM01435" "MAM01436c" "" "CHEBI:17029" "" "" "m01436c" "" "C00461" "" "MNXM10923;MNXM1271" "" "M01436" "m01436c" "MAM01436" "MAM01437c" "" "CHEBI:17029" "" "" "m01437c" "" "C00461" "" "MNXM1271;MNXM46301" "" "M01437" "m01437c" "MAM01437" "MAM01438c" "chtn" "" "" "" "m01438c" "HC02118" "" "" "MNXM1271" "" "chtn" "m01438c" "MAM01438" @@ -2277,7 +2262,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01443c" "" "CHEBI:27869" "" "" "m01443c" "" "C06755" "" "MNXM1468" "" "M01443" "m01443c" "MAM01443" "MAM01444c" "" "" "" "" "m01444c" "" "C14859" "" "MNXM5082" "" "M01444" "m01444c" "MAM01444" "MAM01445c" "cholate" "CHEBI:16359" "" "HMDB0000619" "m01445c" "HC00502" "C00695" "LMST04010001" "MNXM450" "221493" "cholate" "m01445c" "MAM01445" -"MAM01445m" "cholate" "CHEBI:16359" "" "HMDB0000619" "m01445m" "HC00502" "C00695" "LMST04010001" "MNXM450" "221493" "cholate" "m01445m" "MAM01445" "MAM01445x" "cholate" "CHEBI:16359" "" "HMDB0000619" "m01445p" "HC00502" "C00695" "LMST04010001" "MNXM450" "221493" "cholate" "m01445p" "MAM01445" "MAM01445r" "cholate" "CHEBI:16359" "" "HMDB0000619" "m01445r" "HC00502" "C00695" "LMST04010001" "MNXM450" "221493" "cholate" "m01445r" "MAM01445" "MAM01445e" "cholate" "CHEBI:16359" "" "HMDB0000619" "m01445s" "HC00502" "C00695" "LMST04010001" "MNXM450" "221493" "cholate" "m01445s" "MAM01445" @@ -2425,7 +2409,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01513r" "chol" "CHEBI:15354" "" "HMDB0000097" "m01513r" "HC00112" "C00114" "" "MNXM90" "305" "chol" "m01513r" "MAM01513" "MAM01513e" "chol" "CHEBI:15354" "" "HMDB0000097" "m01513s" "HC00112" "C00114" "" "MNXM90" "305" "chol" "m01513s" "MAM01513" "MAM01514c" "cholcoa" "CHEBI:15519" "" "HMDB0001374" "m01514c" "HC00844" "C01794" "" "MNXM162468;MNXM431" "439573" "cholcoa" "m01514c" "MAM01514" -"MAM01514m" "cholcoa" "CHEBI:15519" "" "HMDB0001374" "m01514m" "HC00844" "C01794" "" "MNXM162468;MNXM431" "439573" "cholcoa" "m01514m" "MAM01514" "MAM01514x" "cholcoa" "CHEBI:15519" "" "HMDB0001374" "m01514p" "HC00844" "C01794" "" "MNXM162468;MNXM431" "439573" "cholcoa" "m01514p" "MAM01514" "MAM01514r" "cholcoa" "CHEBI:15519" "" "HMDB0001374" "m01514r" "HC00844" "C01794" "" "MNXM162468;MNXM431" "439573" "cholcoa" "m01514r" "MAM01514" "MAM01515g" "cs_a_b_pre2" "" "" "" "m01515g" "" "" "" "MNXM148157" "" "cs_a_b_pre2" "m01515g" "MAM01515" @@ -2781,10 +2764,10 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01695c" "digalsgalside_hs" "" "" "" "m01695c" "" "C06127" "" "MNXM91564" "" "digalsgalside_hs" "m01695c" "MAM01695" "MAM01695g" "digalsgalside_hs" "" "" "" "m01695g" "" "C06127" "" "MNXM91564" "" "digalsgalside_hs" "m01695g" "MAM01695" "MAM01695e" "digalsgalside_hs" "" "" "" "m01695s" "" "C06127" "" "MNXM91564" "" "digalsgalside_hs" "m01695s" "MAM01695" -"MAM01696c" "dlnlcg" "CHEBI:53486" "CE2516" "HMDB0002925" "m01696c" "HC02100" "C03242" "LMFA01030158" "MNXM147467;MNXM5607" "5280581" "dlnlcg" "m01696c" "MAM01696" +"MAM01696c" "CE2516;dlnlcg" "CHEBI:53486" "CE2516" "HMDB0002925" "m01696c" "HC02100" "C03242" "LMFA01030158" "MNXM147467;MNXM5607" "5280581" "CE2516;dlnlcg" "CE2516_c;m01696c;MAM03332c" "MAM01696" "MAM01696l" "dlnlcg" "CHEBI:53486" "CE2516" "HMDB0002925" "m01696l" "HC02100" "C03242" "LMFA01030158" "MNXM147467;MNXM5607" "5280581" "dlnlcg" "m01696l" "MAM01696" "MAM01696r" "dlnlcg" "CHEBI:53486" "CE2516" "HMDB0002925" "m01696r" "HC02100" "C03242" "LMFA01030158" "MNXM147467;MNXM5607" "5280581" "dlnlcg" "m01696r" "MAM01696" -"MAM01696e" "dlnlcg" "CHEBI:53486" "CE2516" "HMDB0002925" "m01696s" "HC02100" "C03242" "LMFA01030158" "MNXM147467;MNXM5607" "5280581" "dlnlcg" "m01696s" "MAM01696" +"MAM01696e" "dlnlcg" "CHEBI:53486" "CE2516" "HMDB0002925" "m01696s" "HC02100" "C03242" "LMFA01030158" "MNXM147467;MNXM5607" "5280581" "CE2516;dlnlcg" "CE2516_s;m01696s;MAM03332e" "MAM01696" "MAM01697c" "dlnlcgcoa" "CHEBI:27979" "" "HMDB0003947" "m01697c" "HC02102" "C03595" "LMFA07050011" "MNXM1536;MNXM5128" "16061156" "dlnlcgcoa" "m01697c" "MAM01697" "MAM01697m" "dlnlcgcoa" "CHEBI:27979" "" "HMDB0003947" "m01697m" "HC02102" "C03595" "LMFA07050011" "MNXM1536;MNXM5128" "16061156" "dlnlcgcoa" "m01697m" "MAM01697" "MAM01697r" "dlnlcgcoa" "CHEBI:27979" "" "HMDB0003947" "m01697r" "HC02102" "C03595" "LMFA07050011" "MNXM1536;MNXM5128" "16061156" "dlnlcgcoa" "m01697r" "MAM01697" @@ -2846,7 +2829,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01727m" "" "" "" "" "m01727m" "" "" "" "" "" "M01727" "m01727m" "MAM01727" "MAM01727r" "" "" "" "" "m01727r" "" "" "" "" "" "M01727" "m01727r" "MAM01727" "MAM01728c" "ddcaACP" "" "" "" "m01728c" "HC01394" "C05223" "" "MNXM5723;MNXM89851" "" "ddcaACP" "m01728c" "MAM01728" -"MAM01729c" "" "" "" "HMDB0002250" "m01729c" "" "" "" "MNXM51468;MNXM588354" "168381" "M01729" "m01729c" "MAM01729" +"MAM01729c" "" "" "" "HMDB0002250" "m01729c" "" "" "" "MNXM51468;MNXM588354" "168381" "M01729" "m01729c;MAM03540c" "MAM01729" "MAM01729m" "" "" "" "HMDB0002250" "m01729m" "" "" "" "MNXM51468;MNXM588354" "168381" "M01729" "m01729m" "MAM01729" "MAM01729r" "" "" "" "HMDB0002250" "m01729r" "" "" "" "MNXM51468;MNXM588354" "168381" "M01729" "m01729r" "MAM01729" "MAM01730c" "dolichol__L" "CHEBI:16091" "" "" "m01730c" "" "C00381" "LMPR03070004" "MNXM147098" "" "dolichol_L" "m01730c" "MAM01730" @@ -2864,7 +2847,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01737c" "dopasf" "CHEBI:37946" "" "" "m01737c" "" "C13690" "" "MNXM163796" "122136" "dopasf" "m01737c" "MAM01737" "MAM01737e" "dopasf" "CHEBI:37946" "" "" "m01737s" "" "C13690" "" "MNXM163796" "122136" "dopasf" "m01737s" "MAM01737" "MAM01738c" "" "" "CE5276" "" "m01738c" "" "" "" "MNXM5727" "162602" "CE5276" "m01738c" "MAM01738" -"MAM01739c" "" "CHEBI:27404" "CE4888" "HMDB0004058" "m01739c" "" "C05578" "" "MNXM163363" "114683" "CE4888" "m01739c" "MAM01739" +"MAM01739c" "" "CHEBI:27404" "CE4888" "HMDB0004058" "m01739c;m03162c" "" "C05578" "" "MNXM163363;MNXM2336" "114683" "CE4888;M03162" "m01739c;m03162c;MAM03162c" "MAM01739" "MAM01740c" "orn__D" "CHEBI:16176" "" "HMDB0003374" "m01740c" "" "C00515" "" "MNXM1148" "71082" "orn_D" "m01740c" "MAM01740" "MAM01740x" "orn__D" "CHEBI:16176" "" "HMDB0003374" "m01740p" "" "C00515" "" "MNXM1148" "71082" "orn_D" "m01740p" "MAM01740" "MAM01740e" "orn__D" "CHEBI:16176" "" "HMDB0003374" "m01740s" "" "C00515" "" "MNXM1148" "71082" "orn_D" "m01740s" "MAM01740" @@ -2881,7 +2864,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01744e" "ser__D" "CHEBI:16523" "" "HMDB0003406" "m01744s" "" "C00740" "" "MNXM694" "71077" "ser_D" "m01744s" "MAM01744" "MAM01745c" "tag__D" "CHEBI:47693" "" "HMDB0003418" "m01745c" "" "C00795" "" "MNXM92401" "92092" "tagat_D" "m01745c" "MAM01745" "MAM01745e" "tag__D" "CHEBI:47693" "" "HMDB0003418" "m01745s" "" "C00795" "" "MNXM92401" "92092" "tagat_D" "m01745s" "MAM01745" -"MAM01746c" "tag1p__D" "CHEBI:4251" "" "" "m01746c" "HC00664" "C01097" "" "MNXM164716;MNXM795" "439396" "HC00664" "m01746c" "MAM01746" +"MAM01746c" "tag6p__D" "CHEBI:4251" "" "" "m01746c" "HC00664" "C01097" "" "MNXM164716;MNXM795" "439396" "HC00664" "m01746c" "MAM01746" "MAM01747c" "dtdp" "CHEBI:18075" "" "HMDB0001274" "m01747c" "HC00307" "C00363" "" "MNXM152" "164628" "dtdp" "m01747c" "MAM01747" "MAM01747m" "dtdp" "CHEBI:18075" "" "HMDB0001274" "m01747m" "HC00307" "C00363" "" "MNXM152" "164628" "dtdp" "m01747m" "MAM01747" "MAM01747n" "dtdp" "CHEBI:18075" "" "HMDB0001274" "m01747n" "HC00307" "C00363" "" "MNXM152" "164628" "dtdp" "m01747n" "MAM01747" @@ -3033,7 +3016,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01813c" "" "CHEBI:35366" "" "" "m01813c" "HC02065" "C00162" "" "MNXM72" "" "HC02065" "m01813c" "MAM01813" "MAM01814c" "" "CHEBI:35366" "" "" "m01814c" "HC02064" "C00162" "" "MNXM72" "" "HC02064" "m01814c" "MAM01814" "MAM01815c" "" "CHEBI:35366" "" "" "m01815c" "HC02063" "C00162" "" "MNXM72" "" "HC02063" "m01815c" "MAM01815" -"MAM01816n" "" "" "" "" "m01816n" "" "" "PROTEIN" "" "" "M01816" "m01816n" "MAM01816" "MAM01819e" "" "CHEBI:35366" "" "" "m01819s" "" "C00162" "" "MNXM72" "" "M01819" "m01819s" "MAM01819" "MAM01820e" "" "CHEBI:35366" "" "" "m01820s" "" "C00162" "" "MNXM72" "" "M01820" "m01820s" "MAM01820" "MAM01821c" "fe2" "CHEBI:29033" "" "HMDB0000692" "m01821c" "HC01846" "C14818" "" "MNXM111" "27284" "fe2" "m01821c" "MAM01821" @@ -3346,9 +3328,9 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM02007c" "glx" "CHEBI:16891" "" "HMDB0000119" "m02007c" "" "C00048" "" "MNXM69" "760" "glx" "m02007c" "MAM02007" "MAM02007m" "glx" "CHEBI:16891" "" "HMDB0000119" "m02007m" "" "C00048" "" "MNXM69" "760" "glx" "m02007m" "MAM02007" "MAM02007x" "glx" "CHEBI:16891" "" "HMDB0000119" "m02007p" "" "C00048" "" "MNXM69" "760" "glx" "m02007p" "MAM02007" -"MAM02008c" "gm1_hs" "CHEBI:18216" "" "" "m02008c" "HC02161" "C04911" "LMSP0601AP00" "MNXM164818" "" "HC02161" "m02008c" "MAM02008" -"MAM02008g" "gm1_hs" "CHEBI:18216" "" "" "m02008g" "HC02161" "C04911" "LMSP0601AP00" "MNXM164818" "" "HC02161" "m02008g" "MAM02008" -"MAM02008l" "gm1_hs" "CHEBI:18216" "" "" "m02008l" "HC02161" "C04911" "LMSP0601AP00" "MNXM164818" "" "HC02161" "m02008l" "MAM02008" +"MAM02008c" "HC02161" "CHEBI:18216" "" "" "m02008c" "HC02161" "C04911" "LMSP0601AP00" "MNXM164818" "" "HC02161" "m02008c" "MAM02008" +"MAM02008g" "HC02161" "CHEBI:18216" "" "" "m02008g" "HC02161" "C04911" "LMSP0601AP00" "MNXM164818" "" "HC02161" "m02008g" "MAM02008" +"MAM02008l" "HC02161" "CHEBI:18216" "" "" "m02008l" "HC02161" "C04911" "LMSP0601AP00" "MNXM164818" "" "HC02161" "m02008l" "MAM02008" "MAM02009g" "gm1a_hs" "" "" "" "m02009g" "" "" "" "MNXM92361" "" "gm1a_hs" "m02009g" "MAM02009" "MAM02011c" "gm2_hs" "CHEBI:51013" "" "HMDB0004936" "m02011c" "HC02160" "C04884" "LMSP0601AM00" "MNXM164819" "20057332" "HC02160" "m02011c" "MAM02011" "MAM02011g" "gm2_hs" "CHEBI:51013" "" "HMDB0004936" "m02011g" "HC02160" "C04884" "LMSP0601AM00" "MNXM164819" "20057332" "HC02160" "m02011g" "MAM02011" @@ -3440,7 +3422,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM02041e" "h2o2" "CHEBI:16240" "" "HMDB0003125" "m02041s" "HC00036" "C00027" "" "MNXM22" "784" "h2o2" "m02041s" "MAM02041" "MAM02042c" "" "CHEBI:16136" "" "" "m02042c" "HC00250" "C00283" "" "MNXM162964;MNXM89582" "402" "HC00250" "m02042c" "MAM02042" "MAM02042e" "" "CHEBI:16136" "" "" "m02042s" "HC00250" "C00283" "" "MNXM162964;MNXM89582" "402" "HC00250" "m02042s" "MAM02042" -"MAM02043c" "" "CHEBI:16094" "" "" "m02043c" "HC01501" "C00320" "" "MNXM164836;MNXM323" "24478" "HC01501" "m02043c" "MAM02043" +"MAM02043c" "" "CHEBI:5587" "" "" "m02043c" "HC01501" "C05529" "" "MNXM164836;MNXM323" "24478" "HC01501" "m02043c" "MAM02043" "MAM02044c" "" "" "" "" "m02044c" "HC01939" "" "PROTEIN" "" "" "HC01939" "m02044c" "MAM02044" "MAM02044l" "" "" "" "" "m02044l" "HC01939" "" "PROTEIN" "" "" "HC01939" "m02044l" "MAM02044" "MAM02044e" "" "" "" "" "m02044s" "HC01939" "" "PROTEIN" "" "" "HC01939" "m02044s" "MAM02044" @@ -3838,11 +3820,11 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM02325e" "3aib" "CHEBI:33094" "" "HMDB0002166" "m02325s" "" "C03284" "" "MNXM2053;MNXM786" "439434" "3aib" "m02325s" "MAM02325" "MAM02326e" "" "CHEBI:16934" "" "" "m02326s" "HC00955" "C02512" "" "MNXM1014" "439742" "HC00955" "m02326s" "MAM02326" "MAM02327m" "4hglusa" "CHEBI:27809" "" "HMDB0006556" "m02327m" "" "C05938" "" "MNXM2687" "440851" "4hglusa" "m02327m" "MAM02327" -"MAM02328c" "galgluside_hs" "CHEBI:17950" "" "HMDB0004866" "m02328c" "HC02162" "C01290" "LMSP0501AB00" "MNXM269" "" "C01290" "m02328c" "MAM02328" -"MAM02328g" "galgluside_hs" "CHEBI:17950" "" "HMDB0004866" "m02328g" "HC02162" "C01290" "LMSP0501AB00" "MNXM269" "" "C01290" "m02328g" "MAM02328" -"MAM02328l" "galgluside_hs" "CHEBI:17950" "" "HMDB0004866" "m02328l" "HC02162" "C01290" "LMSP0501AB00" "MNXM269" "" "C01290" "m02328l" "MAM02328" -"MAM02328r" "galgluside_hs" "CHEBI:17950" "" "HMDB0004866" "m02328r" "HC02162" "C01290" "LMSP0501AB00" "MNXM269" "" "C01290" "m02328r" "MAM02328" -"MAM02328e" "galgluside_hs" "CHEBI:17950" "" "HMDB0004866" "m02328s" "HC02162" "C01290" "LMSP0501AB00" "MNXM269" "" "C01290" "m02328s" "MAM02328" +"MAM02328c" "digalside_hs" "CHEBI:17950" "" "HMDB0004866" "m02328c" "HC02162" "C01290" "LMSP0501AB00" "MNXM269" "" "C01290" "m02328c" "MAM02328" +"MAM02328g" "digalside_hs" "CHEBI:17950" "" "HMDB0004866" "m02328g" "HC02162" "C01290" "LMSP0501AB00" "MNXM269" "" "C01290" "m02328g" "MAM02328" +"MAM02328l" "digalside_hs" "CHEBI:17950" "" "HMDB0004866" "m02328l" "HC02162" "C01290" "LMSP0501AB00" "MNXM269" "" "C01290" "m02328l" "MAM02328" +"MAM02328r" "digalside_hs" "CHEBI:17950" "" "HMDB0004866" "m02328r" "HC02162" "C01290" "LMSP0501AB00" "MNXM269" "" "C01290" "m02328r" "MAM02328" +"MAM02328e" "digalside_hs" "CHEBI:17950" "" "HMDB0004866" "m02328s" "HC02162" "C01290" "LMSP0501AB00" "MNXM269" "" "C01290" "m02328s" "MAM02328" "MAM02329c" "lald__L" "CHEBI:18419" "" "" "m02329c" "" "C05999" "" "MNXM2387" "439231" "lald_L" "m02329c" "MAM02329" "MAM02329m" "lald__L" "CHEBI:18419" "" "" "m02329m" "" "C05999" "" "MNXM2387" "439231" "lald_L" "m02329m" "MAM02329" "MAM02330g" "gal14acglcgalgluside_hs" "" "" "" "m02330g" "" "" "" "MNXM6313" "" "gal14acglcgalgluside_hs" "m02330g" "MAM02330" @@ -4272,9 +4254,9 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM02578n" "" "CHEBI:16134" "" "" "m02578n" "HC00024" "C00014" "" "" "" "" "m02578n" "MAM02578" "MAM02578x" "" "CHEBI:16134" "" "" "m02578p" "HC00024" "C00014" "" "" "" "" "m02578p" "MAM02578" "MAM02578e" "" "CHEBI:16134" "" "" "m02578s" "HC00024" "C00014" "" "" "" "" "m02578s" "MAM02578" -"MAM02579c" "nh4" "CHEBI:16134" "" "HMDB0000051" "m02579c" "HC00765" "C00014" "" "MNXM15" "222" "nh4" "m02579c" "MAM02579" -"MAM02579m" "nh4" "CHEBI:16134" "" "HMDB0000051" "m02579m" "HC00765" "C00014" "" "MNXM15" "222" "nh4" "m02579m" "MAM02579" -"MAM02579e" "nh4" "CHEBI:16134" "" "HMDB0000051" "m02579s" "HC00765" "C00014" "" "MNXM15" "222" "nh4" "m02579s" "MAM02579" +"MAM02579c" "nh4" "CHEBI:28938" "" "HMDB0000051" "m02579c" "HC00765" "C01342" "" "MNXM15" "222" "nh4" "m02579c" "MAM02579" +"MAM02579m" "nh4" "CHEBI:28938" "" "HMDB0000051" "m02579m" "HC00765" "C01342" "" "MNXM15" "222" "nh4" "m02579m" "MAM02579" +"MAM02579e" "nh4" "CHEBI:28938" "" "HMDB0000051" "m02579s" "HC00765" "C01342" "" "MNXM15" "222" "nh4" "m02579s" "MAM02579" "MAM02580c" "" "" "" "" "m02580c" "" "C14789" "" "MNXM7572" "" "M02580" "m02580c" "MAM02580" "MAM02581c" "nmn" "CHEBI:16171" "" "HMDB0000229" "m02581c" "HC00366" "C00455" "" "MNXM355" "14180" "nmn" "m02581c" "MAM02581" "MAM02581m" "nmn" "CHEBI:16171" "" "HMDB0000229" "m02581m" "HC00366" "C00455" "" "MNXM355" "14180" "nmn" "m02581m" "MAM02581" @@ -4398,10 +4380,10 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM02646l" "ocdcea" "CHEBI:30823" "" "HMDB0000207" "m02646l" "HC00510" "C00712" "LMFA01030002" "MNXM306;MNXM727011" "5460221" "ocdcea" "m02646l" "MAM02646" "MAM02646r" "ocdcea" "CHEBI:30823" "" "HMDB0000207" "m02646r" "HC00510" "C00712" "LMFA01030002" "MNXM306;MNXM727011" "5460221" "ocdcea" "m02646r" "MAM02646" "MAM02646e" "ocdcea" "CHEBI:30823" "" "HMDB0000207" "m02646s" "HC00510" "C00712" "LMFA01030002" "MNXM306;MNXM727011" "5460221" "ocdcea" "m02646s" "MAM02646" -"MAM02647c" "odecoa" "CHEBI:15534" "" "HMDB0001322" "m02647c" "HC00400" "C00510" "LMFA07050055" "MNXM1848;MNXM686" "5280355" "odecoa" "m02647c" "MAM02647" -"MAM02647m" "odecoa" "CHEBI:15534" "" "HMDB0001322" "m02647m" "HC00400" "C00510" "LMFA07050055" "MNXM1848;MNXM686" "5280355" "odecoa" "m02647m" "MAM02647" -"MAM02647x" "odecoa" "CHEBI:15534" "" "HMDB0001322" "m02647p" "HC00400" "C00510" "LMFA07050055" "MNXM1848;MNXM686" "5280355" "odecoa" "m02647p" "MAM02647" -"MAM02647r" "odecoa" "CHEBI:15534" "" "HMDB0001322" "m02647r" "HC00400" "C00510" "LMFA07050055" "MNXM1848;MNXM686" "5280355" "odecoa" "m02647r" "MAM02647" +"MAM02647c" "odecoa" "CHEBI:15534" "" "HMDB0001322" "m02647c" "HC00400" "C00510" "LMFA07050356" "MNXM1848;MNXM686" "5280355" "odecoa" "m02647c" "MAM02647" +"MAM02647m" "odecoa" "CHEBI:15534" "" "HMDB0001322" "m02647m" "HC00400" "C00510" "LMFA07050356" "MNXM1848;MNXM686" "5280355" "odecoa" "m02647m" "MAM02647" +"MAM02647x" "odecoa" "CHEBI:15534" "" "HMDB0001322" "m02647p" "HC00400" "C00510" "LMFA07050356" "MNXM1848;MNXM686" "5497111" "odecoa" "m02647p" "MAM02647" +"MAM02647r" "odecoa" "CHEBI:15534" "" "HMDB0001322" "m02647r" "HC00400" "C00510" "LMFA07050356" "MNXM1848;MNXM686" "5280355" "odecoa" "m02647r" "MAM02647" "MAM02648c" "eicostet" "" "" "HMDB0002177" "m02648c" "" "" "LMFA01030176" "MNXM11474" "11722594" "eicostet" "m02648c" "MAM02648" "MAM02648l" "eicostet" "" "" "HMDB0002177" "m02648l" "" "" "LMFA01030176" "MNXM11474" "11722594" "eicostet" "m02648l" "MAM02648" "MAM02648r" "eicostet" "" "" "HMDB0002177" "m02648r" "" "" "LMFA01030176" "MNXM11474" "11722594" "eicostet" "m02648r" "MAM02648" @@ -4450,17 +4432,17 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM02675l" "hdcea" "CHEBI:28716" "" "HMDB0003229" "m02675l" "HC01981" "C08362" "LMFA01030056" "MNXM950" "445638" "hdcea" "m02675l" "MAM02675" "MAM02675r" "hdcea" "CHEBI:28716" "" "HMDB0003229" "m02675r" "HC01981" "C08362" "LMFA01030056" "MNXM950" "445638" "hdcea" "m02675r" "MAM02675" "MAM02675e" "hdcea" "CHEBI:28716" "" "HMDB0003229" "m02675s" "HC01981" "C08362" "LMFA01030056" "MNXM950" "445638" "hdcea" "m02675s" "MAM02675" -"MAM02676c" "hdcecrn" "" "" "" "m02676c" "HC10854" "" "" "MNXM8716" "11953816" "hdcecrn" "m02676c" "MAM02676" -"MAM02676m" "hdcecrn" "" "" "" "m02676m" "HC10854" "" "" "MNXM8716" "11953816" "hdcecrn" "m02676m" "MAM02676" -"MAM02676r" "hdcecrn" "" "" "" "m02676r" "HC10854" "" "" "MNXM8716" "11953816" "hdcecrn" "m02676r" "MAM02676" +"MAM02676c" "hdcecrn" "" "" "" "m02676c" "HC10854" "" "" "MNXM8716" "129849228" "hdcecrn" "m02676c" "MAM02676" +"MAM02676m" "hdcecrn" "" "" "" "m02676m" "HC10854" "" "" "MNXM8716" "129849228" "hdcecrn" "m02676m" "MAM02676" +"MAM02676r" "hdcecrn" "" "" "" "m02676r" "HC10854" "" "" "MNXM8716" "129849228" "hdcecrn" "m02676r" "MAM02676" "MAM02677c" "hdcoa" "CHEBI:53152" "CE0852" "HMDB0006532" "m02677c" "HC10852" "" "LMFA07050059" "MNXM781;MNXM90167" "53477852" "hdcoa" "m02677c" "MAM02677" "MAM02677m" "hdcoa" "CHEBI:53152" "CE0852" "HMDB0006532" "m02677m" "HC10852" "" "LMFA07050059" "MNXM781;MNXM90167" "53477852" "hdcoa" "m02677m" "MAM02677" "MAM02677x" "hdcoa" "CHEBI:53152" "CE0852" "HMDB0006532" "m02677p" "HC10852" "" "LMFA07050059" "MNXM781;MNXM90167" "53477852" "hdcoa" "m02677p" "MAM02677" "MAM02677r" "hdcoa" "CHEBI:53152" "CE0852" "HMDB0006532" "m02677r" "HC10852" "" "LMFA07050059" "MNXM781;MNXM90167" "53477852" "hdcoa" "m02677r" "MAM02677" -"MAM02678c" "pmtcoa" "CHEBI:15525" "" "HMDB0001338" "m02678c" "HC00150" "C00154" "LMFA07050002" "MNXM88" "15667" "pmtcoa" "m02678c" "MAM02678" -"MAM02678m" "pmtcoa" "CHEBI:15525" "" "HMDB0001338" "m02678m" "HC00150" "C00154" "LMFA07050002" "MNXM88" "15667" "pmtcoa" "m02678m" "MAM02678" -"MAM02678x" "pmtcoa" "CHEBI:15525" "" "HMDB0001338" "m02678p" "HC00150" "C00154" "LMFA07050002" "MNXM88" "15667" "pmtcoa" "m02678p" "MAM02678" -"MAM02678r" "pmtcoa" "CHEBI:15525" "" "HMDB0001338" "m02678r" "HC00150" "C00154" "LMFA07050002" "MNXM88" "15667" "pmtcoa" "m02678r" "MAM02678" +"MAM02678c" "pmtcoa" "CHEBI:15525" "" "HMDB0001338" "m02678c" "HC00150" "C00154" "LMFA07050002" "MNXM88" "644109" "pmtcoa" "m02678c" "MAM02678" +"MAM02678m" "pmtcoa" "CHEBI:15525" "" "HMDB0001338" "m02678m" "HC00150" "C00154" "LMFA07050002" "MNXM88" "644109" "pmtcoa" "m02678m" "MAM02678" +"MAM02678x" "pmtcoa" "CHEBI:15525" "" "HMDB0001338" "m02678p" "HC00150" "C00154" "LMFA07050002" "MNXM88" "644109" "pmtcoa" "m02678p" "MAM02678" +"MAM02678r" "pmtcoa" "CHEBI:15525" "" "HMDB0001338" "m02678r" "HC00150" "C00154" "LMFA07050002" "MNXM88" "644109" "pmtcoa" "m02678r" "MAM02678" "MAM02679c" "ptth" "CHEBI:16753" "" "HMDB0003426" "m02679c" "HC00554" "C00831" "" "MNXM727034" "439322" "" "m02679c" "MAM02679" "MAM02679m" "ptth" "CHEBI:16753" "" "HMDB0003426" "m02679m" "HC00554" "C00831" "" "MNXM727034" "439322" "" "m02679m" "MAM02679" "MAM02680c" "pnto__R" "CHEBI:7916" "" "HMDB0000210" "m02680c" "HC00568" "C00864" "" "MNXM364" "988" "pnto_R" "m02680c" "MAM02680" @@ -4577,9 +4559,9 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM02745l" "" "" "" "HMDB0000521" "m02745l" "" "" "LMFA01030248" "MNXM23686;MNXM499525" "5312400" "M02745" "m02745l" "MAM02745" "MAM02745r" "" "" "" "HMDB0000521" "m02745r" "" "" "LMFA01030248" "MNXM23686;MNXM499525" "5312400" "M02745" "m02745r" "MAM02745" "MAM02745e" "" "" "" "HMDB0000521" "m02745s" "" "" "LMFA01030248" "MNXM23686;MNXM499525" "5312400" "M02745" "m02745s" "MAM02745" -"MAM02746c" "phyt" "CHEBI:16285" "CE2414" "HMDB0000801" "m02746c" "" "C01607" "LMPR0104010004" "MNXM165293;MNXM1774" "26840" "CE2414" "m02746c" "MAM02746" -"MAM02746x" "phyt" "CHEBI:16285" "CE2414" "HMDB0000801" "m02746p" "" "C01607" "LMPR0104010004" "MNXM165293;MNXM1774" "26840" "CE2414" "m02746p" "MAM02746" -"MAM02746e" "phyt" "CHEBI:16285" "CE2414" "HMDB0000801" "m02746s" "" "C01607" "LMPR0104010004" "MNXM165293;MNXM1774" "26840" "CE2414" "m02746s" "MAM02746" +"MAM02746c" "phyt" "CHEBI:16285" "CE2414" "HMDB0000801" "m02746c" "" "C01607" "LMPR0104010004" "MNXM165293;MNXM1774;MNXM91275" "26840" "CE2414;phyt" "m02746c;phyt_c;MAM03884c" "MAM02746" +"MAM02746x" "phyt" "CHEBI:16285" "CE2414" "HMDB0000801" "m02746p" "" "C01607" "LMPR0104010004" "MNXM165293;MNXM1774" "26840" "CE2414" "m02746p;MAM03884x" "MAM02746" +"MAM02746e" "phyt" "CHEBI:16285" "CE2414" "HMDB0000801" "m02746s" "" "C01607" "LMPR0104010004" "MNXM165293;MNXM1774;MNXM91275" "26840" "CE2414;phyt" "m02746s;phyt_s;MAM03884e" "MAM02746" "MAM02747c" "phytcoa" "CHEBI:15538" "CE5122" "" "m02747c" "" "C02060" "" "MNXM91276;MNXM931" "439640" "phytcoa" "m02747c" "MAM02747" "MAM02747x" "phytcoa" "CHEBI:15538" "CE5122" "" "m02747p" "" "C02060" "" "MNXM91276;MNXM931" "439640" "phytcoa" "m02747p" "MAM02747" "MAM02748c" "" "CHEBI:31998" "" "" "m02748c" "" "C12145" "LMSP01030000" "MNXM731" "" "M02748" "m02748c" "MAM02748" @@ -4605,9 +4587,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM02754e" "4nph" "CHEBI:16836" "" "" "m02754s" "HC00570" "C00870" "" "MNXM162908" "" "4nph" "m02754s" "MAM02754" "MAM02755c" "" "CHEBI:15986" "" "" "m02755c" "" "C00419" "" "MNXM162987" "" "M02755" "m02755c" "MAM02755" "MAM02756c" "ppbng" "CHEBI:17381" "" "HMDB0000245" "m02756c" "HC00588" "C00931" "" "MNXM554" "1021" "ppbng" "m02756c" "MAM02756" -"MAM02757c" "" "" "" "" "m02757c" "" "" "" "" "" "M02757" "m02757c" "MAM02757" -"MAM02757l" "" "" "" "" "m02757l" "" "" "" "" "" "M02757" "m02757l" "MAM02757" -"MAM02757n" "" "" "" "" "m02757n" "" "" "" "" "" "M02757" "m02757n" "MAM02757" "MAM02759c" "ppi" "CHEBI:18361" "" "HMDB0000250" "m02759c" "HC00023" "C00013" "" "MNXM11" "644102" "ppi" "m02759c" "MAM02759" "MAM02759m" "ppi" "CHEBI:18361" "" "HMDB0000250" "m02759m" "HC00023" "C00013" "" "MNXM11" "644102" "ppi" "m02759m" "MAM02759" "MAM02759n" "ppi" "CHEBI:18361" "" "HMDB0000250" "m02759n" "HC00023" "C00013" "" "MNXM11" "644102" "ppi" "m02759n" "MAM02759" @@ -5079,8 +5058,8 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM03019x" "" "CHEBI:87717" "" "" "m03019p" "" "" "" "" "" "M03019" "m03019p" "MAM03019" "MAM03020m" "" "CHEBI:77549" "CE2591" "" "m03020m" "HC12591" "" "" "MNXM683714" "" "CE2591" "m03020m" "MAM03020" "MAM03020x" "" "CHEBI:77549" "CE2591" "" "m03020p" "HC12591" "" "" "MNXM683714" "" "CE2591" "m03020p" "MAM03020" -"MAM03021m" "" "CHEBI:28387" "" "HMDB0011123" "m03021m" "" "C05279" "" "MNXM2039" "53480665" "C05279" "m03021m" "MAM03021" -"MAM03021x" "" "CHEBI:28387" "" "HMDB0011123" "m03021p" "" "C05279" "" "MNXM2039" "53480665" "C05279" "m03021p" "MAM03021" +"MAM03021m" "" "CHEBI:28387" "" "HMDB0011123" "m03021m" "" "C05279" "" "MNXM2039" "5280770" "C05279" "m03021m" "MAM03021" +"MAM03021x" "" "CHEBI:28387" "" "HMDB0011123" "m03021p" "" "C05279" "" "MNXM2039" "5280770" "C05279" "m03021p" "MAM03021" "MAM03022m" "" "CHEBI:87701" "" "" "m03022m" "" "" "" "" "" "M03022" "m03022m" "MAM03022" "MAM03022x" "" "CHEBI:87701" "" "" "m03022p" "" "" "" "" "" "M03022" "m03022p" "MAM03022" "MAM03023m" "" "" "CE2594" "" "m03023m" "HC12594" "" "" "" "" "CE2594;HC12594" "m03023m" "MAM03023" @@ -5327,7 +5306,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM03160l" "" "CHEBI:27499" "" "" "m03160l" "" "C06128" "LMSP0601AA00" "MNXM147517" "" "M03160" "m03160l" "MAM03160" "MAM03161c" "" "CHEBI:28087" "" "" "m03161c" "" "C00182" "" "MNXM55375" "" "M03161" "m03161c" "MAM03161" "MAM03161e" "" "CHEBI:28087" "" "" "m03161s" "" "C00182" "" "MNXM55375" "" "M03161" "m03161s" "MAM03161" -"MAM03162c" "" "CHEBI:27404" "" "" "m03162c" "" "C05578" "" "MNXM2336" "" "M03162" "m03162c" "MAM03162" "MAM03163c" "ind56qn" "CHEBI:27406" "" "" "m03163c" "" "C05579" "" "MNXM5183" "" "M03163;ind56qn" "m03163c" "MAM03163" "MAM03164c" "alaala" "CHEBI:16576" "" "" "m03164c" "" "C00993" "" "MNXM739338" "5460362" "M03164;alaala" "m03164c" "MAM03164" "MAM03165c" "" "CHEBI:16802" "" "" "m03165c" "" "" "" "MNXM44065" "" "M03165" "m03165c" "MAM03165" @@ -5340,7 +5318,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM03140c" "" "" "" "" "m03140c" "" "" "" "" "" "M03140" "m03140c" "MAM03140" "MAM03143c" "" "" "" "" "m03143c" "" "" "" "" "" "M03143" "m03143c" "MAM03143" "MAM01004m" "34hpl" "CHEBI:17385" "" "HMDB0000755" "" "" "C03672" "" "MNXM114141" "9378" "34hpl" "m01004m" "MAM01004" -"MAM03226m" "3hibutcoa" "CHEBI:15481" "" "" "" "" "C04047" "" "MNXM446" "" "3hibutcoa" "3hibutcoa_m" "MAM03226" "MAM00799c" "3hpcoa" "CHEBI:27762" "" "" "" "HC01557" "C05668" "" "MNXM1263" "440753" "3hpcoa" "m00799c" "MAM00799" "MAM02142c" "3hpp" "CHEBI:33404" "" "HMDB0000700" "" "HC00625" "C01013" "" "MNXM872" "68152" "3hpp" "m02142c" "MAM02142" "MAM00900c" "msa" "CHEBI:17960" "" "" "" "HC00203" "C00222" "" "MNXM244" "868" "msa" "m00900c" "MAM00900" @@ -5389,7 +5366,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00809r" "4mzym_int2" "CHEBI:50593" "" "" "" "HC02109" "C15816" "LMST01010167" "MNXM162901;MNXM36392;MNXM8744" "" "4mzym_int2" "m00809r" "MAM00809" "MAM04082r" "zym_int2" "" "" "" "" "" "" "" "MNXM97119" "22298942" "zym_int2" "zym_int2_r" "MAM04082" "MAM03158r" "zymst" "CHEBI:18252" "" "" "" "HC01451" "C05437" "LMST01010066" "MNXM574" "92746" "zymst" "m03158r" "MAM03158" -"MAM02579r" "nh4" "CHEBI:16134" "" "HMDB0000051" "" "HC00765" "C00014" "" "MNXM15" "222" "nh4" "m02579r" "MAM02579" +"MAM02579r" "nh4" "CHEBI:28938" "" "HMDB0000051" "" "HC00765" "C01342" "" "MNXM15" "222" "nh4" "m02579r" "MAM02579" "MAM01427m" "cdpdag_hs" "" "" "" "" "HC02078" "C00269" "LMGP13010000" "MNXM5661" "" "cdpdag_hs" "m01427m" "MAM01427" "MAM02733m" "pa_hs" "CHEBI:16337" "" "" "" "HC02049" "C00416" "LMGP10010000" "MNXM77635" "" "pa_hs" "m02733m" "MAM02733" "MAM00121x" "clpndcoa" "CHEBI:63541" "CE4822" "HMDB0006267" "" "" "C16166" "LMFA07050048" "MNXM4529;MNXM97364" "53477812" "clpndcoa" "m00121p" "MAM00121" @@ -5402,11 +5379,11 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01431e" "crmp_hs" "" "" "" "" "HC02165" "" "" "MNXM92165" "" "crmp_hs" "m01431s" "MAM01431" "MAM00950x" "dmnoncrn" "" "" "" "" "" "" "" "MNXM8138" "" "dmnoncrn" "m00950p" "MAM00950" "MAM03554x" "dmnoncoa" "" "" "" "" "" "" "" "MNXM6100" "" "dmnoncoa" "dmnoncoa_p" "MAM03554" -"MAM02579n" "nh4" "CHEBI:16134" "" "HMDB0000051" "" "HC00765" "C00014" "" "MNXM15" "222" "nh4" "m02579n" "MAM02579" +"MAM02579n" "nh4" "CHEBI:28938" "" "HMDB0000051" "" "HC00765" "C01342" "" "MNXM15" "222" "nh4" "m02579n" "MAM02579" "MAM00240r" "dag_hs" "CHEBI:17815" "" "" "" "HC02055" "C00641" "LMGL02010000" "MNXM59" "" "dag_hs" "m00240r" "MAM00240" "MAM02733n" "pa_hs" "CHEBI:16337" "" "" "" "HC02049" "C00416" "LMGP10010000" "MNXM77635" "" "pa_hs" "m02733n" "MAM02733" "MAM00240e" "dag_hs" "CHEBI:17815" "" "" "" "HC02055" "C00641" "LMGL02010000" "MNXM59" "" "dag_hs" "m00240s" "MAM00240" -"MAM02579x" "nh4" "CHEBI:16134" "" "HMDB0000051" "" "HC00765" "C00014" "" "MNXM15" "222" "nh4" "m02579p" "MAM02579" +"MAM02579x" "nh4" "CHEBI:28938" "" "HMDB0000051" "" "HC00765" "C01342" "" "MNXM15" "222" "nh4" "m02579p" "MAM02579" "MAM02959c" "tag_hs" "CHEBI:17855" "" "" "" "HC02062" "C00422" "LMGL03010000" "MNXM9170" "" "tag_hs" "m02959c" "MAM02959" "MAM01449r" "zymstnl" "CHEBI:16608" "" "HMDB0006841" "" "HC02126" "C03845" "LMST01010096" "MNXM2494" "101770" "zymstnl" "m01449r" "MAM01449" "MAM01066r" "chlstol" "CHEBI:16290" "" "" "" "HC01452" "C05439" "" "MNXM162749;MNXM830" "" "chlstol" "m01066r" "MAM01066" @@ -5422,7 +5399,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01706x" "dmpp" "CHEBI:16057" "" "HMDB0001120" "" "HC00213" "C00235" "LMPR01010001" "MNXM132" "647" "dmpp" "m01706p" "MAM01706" "MAM01953x" "grdp" "CHEBI:17211" "" "" "" "HC00288" "C00341" "" "MNXM100" "445995" "grdp" "m01953p" "MAM01953" "MAM03553m" "dmhptcoa" "" "" "" "" "" "" "" "MNXM8044" "" "dmhptcoa" "dmhptcoa_m" "MAM03553" -"MAM03554c" "dmnoncoa" "" "" "" "" "" "" "" "MNXM6100" "" "dmnoncoa" "dmnoncoa_c" "MAM03554" "MAM03554m" "dmnoncoa" "" "" "" "" "" "" "" "MNXM6100" "" "dmnoncoa" "dmnoncoa_m" "MAM03554" "MAM01731c" "dolglcp__L" "CHEBI:15812" "" "" "" "" "C01246" "LMPR03080014" "MNXM146386" "" "dolglcp_L" "m01731c" "MAM01731" "MAM00164x" "5dpmev" "CHEBI:15899" "" "" "" "HC00685" "C01143" "" "MNXM689" "439418" "5dpmev" "m00164p" "MAM00164" @@ -5444,7 +5420,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM03623e" "glygn5" "" "" "" "" "" "" "" "MNXM11717" "" "glygn5" "glygn5_s" "MAM03623" "MAM00656e" "lpchol_hs" "CHEBI:17504" "" "" "" "HC02016" "C04230" "LMGP01050000" "MNXM5213" "" "lpchol_hs" "m00656s" "MAM00656" "MAM02715e" "pglyc_hs" "" "" "" "" "HC02096" "C00344" "LMGP04010000" "MNXM9017" "" "pglyc_hs" "m02715s" "MAM02715" -"MAM03884e" "phyt" "CHEBI:16285" "" "HMDB0000801" "" "" "C01607" "" "MNXM91275" "26840" "phyt" "phyt_s" "MAM03884" "MAM02808e" "ps_hs" "CHEBI:18303" "" "" "" "HC02006" "C02737" "LMGP03010000" "MNXM5273" "" "ps_hs" "m02808s" "MAM02808" "MAM01232e" "retinol_9_cis" "" "CE1754" "" "" "" "" "" "MNXM162711;MNXM2626" "9947823" "retinol_9_cis" "m01232s" "MAM01232" "MAM00291e" "retinol_cis_11" "" "" "" "" "" "C00899" "LMPR01090005" "MNXM162437;MNXM870" "5280382" "retinol_cis_11" "m00291s" "MAM00291" @@ -5455,7 +5430,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM03726c" "lnlcACP" "" "" "" "" "" "" "" "MNXM19075" "" "lnlcACP" "lnlcACP_c" "MAM03726" "MAM03725c" "lneldcACP" "" "" "" "" "" "" "" "MNXM19074" "" "lneldcACP" "lneldcACP_c" "MAM03725" "MAM03887c" "pristcoa" "CHEBI:64039" "" "" "" "" "" "" "MNXM7699" "25137904" "pristcoa" "pristcoa_c" "MAM03887" -"MAM03884c" "phyt" "CHEBI:16285" "" "HMDB0000801" "" "" "C01607" "" "MNXM91275" "26840" "phyt" "phyt_c" "MAM03884" "MAM03791m" "octd11ecoa" "" "" "" "" "" "" "" "" "" "octd11ecoa" "octd11ecoa_m" "MAM03791" "MAM00108x" "strdnccoa" "CHEBI:63545" "CE4815" "" "" "" "C16163" "LMFA07050046" "MNXM3361" "23724640" "strdnccoa" "m00108p" "MAM00108" "MAM00103x" "tmndnccoa" "" "CE4813" "" "" "" "C16165" "LMFA07050063" "MNXM1449;MNXM2869" "52922050" "tmndnccoa" "m00103p" "MAM00103" @@ -5507,7 +5481,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM02733g" "pa_hs" "CHEBI:16337" "" "" "" "HC02049" "C00416" "LMGP10010000" "MNXM77635" "" "pa_hs" "m02733g" "MAM02733" "MAM02684m" "pchol_hs" "CHEBI:16110" "" "" "" "HC02000" "C00157" "" "MNXM2028" "" "pchol_hs" "m02684m" "MAM02684" "MAM03850r" "pecgoncoa" "" "" "" "" "" "" "" "MNXM92624" "443846" "pecgoncoa" "pecgoncoa_r" "MAM03850" -"MAM03887x" "pristcoa" "CHEBI:64039" "" "" "" "" "" "" "MNXM7699" "25137904" "pristcoa" "pristcoa_p" "MAM03887" +"MAM03887x" "pristcoa" "CHEBI:77250" "" "" "" "" "" "" "MNXM7699" "25137904" "pristcoa" "pristcoa_p" "MAM03887" "MAM02717c" "pgp_hs" "" "" "" "" "HC02095" "C03892" "LMGP05010000" "MNXM12647" "" "pgp_hs" "m02717c" "MAM02717" "MAM02725m" "phpyr" "CHEBI:30851" "" "HMDB0000205" "" "" "C00166" "" "MNXM162242;MNXM210" "997" "phpyr" "m02725m" "MAM02725" "MAM00553r" "pail4p_hs" "CHEBI:17526" "" "" "" "" "C01277" "" "MNXM2456" "" "pail4p_hs" "m00553r" "MAM00553" @@ -5520,7 +5494,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01265x" "prpncoa" "CHEBI:15513" "" "" "" "HC00579" "C00894" "" "MNXM650" "439340" "prpncoa" "m01265p" "MAM01265" "MAM02808g" "ps_hs" "CHEBI:18303" "" "" "" "HC02006" "C02737" "LMGP03010000" "MNXM5273" "" "ps_hs" "m02808g" "MAM02808" "MAM02808m" "ps_hs" "CHEBI:18303" "" "" "" "HC02006" "C02737" "LMGP03010000" "MNXM5273" "" "ps_hs" "m02808m" "MAM02808" -"MAM03884x" "phyt" "CHEBI:16285" "" "HMDB0000801" "" "" "C01607" "" "MNXM91275" "26840" "phyt" "phyt_p" "MAM03884" "MAM01291x" "adrn" "CHEBI:53487" "" "HMDB0002226" "" "" "C16527" "LMFA01030178" "MNXM40344;MNXM5042" "5497181" "adrn" "m01291p" "MAM01291" "MAM02816m" "pyam5p" "CHEBI:18335" "" "" "" "HC00475" "C00647" "" "MNXM366" "1053" "pyam5p" "m02816m" "MAM02816" "MAM02814m" "pydx5p" "CHEBI:18405" "" "HMDB0001491" "" "HC00028" "C00018" "" "MNXM161" "1051" "pydx5p" "m02814m" "MAM02814" @@ -5550,15 +5523,13 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM03127e" "" "CHEBI:28766" "" "" "" "HC01609" "C05766" "" "MNXM1123;MNXM165232" "440775" "HC01609" "m03127s" "MAM03127" "MAM01605e" "cpppg1" "CHEBI:28607" "" "HMDB0002158" "" "HC01610" "C05768" "" "MNXM1322" "440776" "cpppg1" "m01605s" "MAM01605" "MAM02011e" "gm2_hs" "CHEBI:51013" "" "HMDB0004936" "" "HC02160" "C04884" "LMSP0601AM00" "MNXM164819" "20057332" "HC02160" "m02011s" "MAM02011" -"MAM02008e" "gm1_hs" "CHEBI:18216" "" "" "" "HC02161" "C04911" "LMSP0601AP00" "MNXM164818" "" "HC02161" "m02008s" "MAM02008" +"MAM02008e" "HC02161" "CHEBI:18216" "" "" "" "HC02161" "C04911" "LMSP0601AP00" "MNXM164818" "" "HC02161" "m02008s" "MAM02008" "MAM03108e" "udpg" "CHEBI:18066" "" "" "" "HC00038" "C00029" "" "MNXM52" "53477679" "udpg" "m03108s" "MAM03108" "MAM02411x" "pmtcrn" "CHEBI:17490" "" "HMDB0000222" "" "HC01034" "C02990" "LMFA07070004" "MNXM162587;MNXM787" "11953816" "pmtcrn" "m02411p" "MAM02411" "MAM02388x" "lnlccrn" "" "" "" "" "HC10855" "" "" "MNXM8847" "6450015" "lnlccrn" "m02388p" "MAM02388" "MAM01363x" "arachdcrn" "" "" "" "" "HC12236" "" "" "MNXM8358" "" "arachdcrn" "m01363p" "MAM01363" "MAM01747e" "dtdp" "CHEBI:18075" "" "HMDB0001274" "" "HC00307" "C00363" "" "MNXM152" "164628" "dtdp" "m01747s" "MAM01747" "MAM00755c" "dhcholoylcoa" "CHEBI:27393" "" "" "" "" "C05447" "LMST01010220" "MNXM163354;MNXM2748" "5280796" "dhcholoylcoa" "m00755c" "MAM00755" -"MAM03318r" "C02528" "CHEBI:16755" "" "HMDB0000518" "" "" "C02528" "" "MNXM1183" "10133" "C02528" "C02528_r" "MAM03318" -"MAM03318c" "C02528" "CHEBI:16755" "" "HMDB0000518" "" "" "C02528" "" "MNXM1183" "10133" "C02528" "C02528_c" "MAM03318" "MAM00726m" "34dhmald" "" "" "" "" "HC01514" "C05577" "" "MNXM1633" "151725" "34dhmald" "m00726m" "MAM00726" "MAM00727m" "34dhoxmand" "" "" "" "" "HC01517" "C05580" "" "MNXM3473;MNXM90911" "85782" "34dhoxmand" "m00727m" "MAM00727" "MAM02137m" "homoval" "CHEBI:545959" "" "HMDB0000118" "" "HC01519" "C05582" "" "MNXM162963;MNXM3287" "1738" "homoval" "m02137m" "MAM02137" @@ -5566,7 +5537,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00820m" "3m4hpga" "" "" "" "" "HC01520" "C05583" "" "MNXM162904;MNXM1989" "440729" "3m4hpga" "m00820m" "MAM00820" "MAM03136m" "3mox4hoxm" "CHEBI:1127735" "" "HMDB0000291" "" "HC01521" "C05584" "" "MNXM163196;MNXM3383" "736172" "3mox4hoxm" "m03136m" "MAM03136" "MAM02336x" "lanost" "CHEBI:16521" "" "HMDB0001251" "" "HC00833" "C01724" "LMST01010017" "MNXM482" "246983" "lanost" "m02336p" "MAM02336" -"MAM03318e" "C02528" "CHEBI:16755" "" "HMDB0000518" "" "" "C02528" "" "MNXM1183" "10133" "C02528" "C02528_s" "MAM03318" "MAM00755m" "dhcholoylcoa" "CHEBI:27393" "" "" "" "" "C05447" "LMST01010220" "MNXM163354;MNXM2748" "5280796" "dhcholoylcoa" "m00755m" "MAM00755" "MAM00968r" "" "" "" "" "" "HC02110" "C05103" "" "MNXM1804" "22212495" "HC02110" "m00968r" "MAM00968" "MAM00051r" "hdd2coa" "CHEBI:28935" "" "HMDB0003945" "" "HC01411" "C05272" "LMFA07050020" "MNXM581" "46173176" "hdd2coa" "m00051r" "MAM00051" @@ -5577,7 +5547,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM03326m" "" "" "CE0692" "" "" "" "" "" "" "" "CE0692" "CE0692_m" "MAM03326" "MAM03393c" "HC02154" "" "" "" "" "HC02154" "" "" "MNXM164821" "" "HC02154" "HC02154_c" "MAM03393" "MAM03393e" "HC02154" "" "" "" "" "HC02154" "" "" "MNXM164821" "" "HC02154" "HC02154_s" "MAM03393" -"MAM00270e" "wharachd" "CHEBI:34306" "" "" "" "" "C14748" "" "MNXM22451" "5283157" "wharachd" "m00270s" "MAM00270" +"MAM00270e" "wharachd" "CHEBI:34306" "" "" "m00591s" "HC02179" "C14748" "" "MNXM22451;MNXM6760" "5283157" "wharachd" "m00270s;m00591s;MAM00591e" "MAM00270" "MAM02938m" "ocdca" "CHEBI:28842" "" "HMDB0000827" "" "" "C01530" "LMFA01010018" "MNXM236" "5281" "ocdca" "m02938m" "MAM02938" "MAM02938x" "ocdca" "CHEBI:28842" "" "HMDB0000827" "" "" "C01530" "LMFA01010018" "MNXM236" "5281" "ocdca" "m02938p" "MAM02938" "MAM00083c" "" "" "CE2421" "" "" "" "" "" "MNXM31120" "53481430" "CE2421" "m00083c" "MAM00083" @@ -5593,7 +5563,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM02385m" "lgnc" "CHEBI:28866" "" "HMDB0002003" "" "HC01788" "C08320" "LMFA01010024" "MNXM3297;MNXM8841" "11197" "lgnc" "m02385m" "MAM02385" "MAM02385x" "lgnc" "CHEBI:28866" "" "HMDB0002003" "" "HC01788" "C08320" "LMFA01010024" "MNXM3297;MNXM8841" "11197" "lgnc" "m02385p" "MAM02385" "MAM00890r" "3ohodcoa" "CHEBI:50571" "" "HMDB0006498" "" "" "C16216" "" "MNXM513" "22833663" "3ohodcoa" "m00890r" "MAM00890" -"MAM00057n" "od2coa" "CHEBI:50570" "" "HMDB0006529" "" "" "C16218" "LMFA07050055" "MNXM954" "53477850" "od2coa" "m00057n" "MAM00057" +"MAM00057n" "od2coa" "CHEBI:50570" "" "HMDB0006529" "" "" "C16218" "LMFA07050385" "MNXM954" "53477850" "od2coa" "m00057n" "MAM00057" "MAM02941n" "stcoa" "CHEBI:15541" "" "HMDB0001114" "" "HC00338" "C00412" "LMFA07050004" "MNXM272" "439229" "stcoa" "m02941n" "MAM02941" "MAM02158e" "" "" "CE2011" "" "" "" "" "" "MNXM57006" "124985" "CE2011" "m02158s" "MAM02158" "MAM02986l" "tcynt" "CHEBI:18022" "" "HMDB0001453" "" "" "C01755" "" "MNXM762" "9322" "tcynt" "m02986l" "MAM02986" @@ -5682,7 +5652,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00761c" "" "" "CE3038" "" "" "" "" "" "MNXM6853" "3081084" "CE3038" "m00761c" "MAM00761" "MAM01180c" "" "" "CE2345" "" "" "" "" "" "MNXM164390" "" "CE2345" "m01180c" "MAM01180" "MAM01434m" "dcholcoa" "CHEBI:28701" "" "HMDB0006292" "" "HC01426" "C05337" "" "MNXM834" "11953854" "dcholcoa" "m01434m" "MAM01434" -"MAM03318m" "C02528" "CHEBI:16755" "" "HMDB0000518" "" "" "C02528" "" "MNXM1183" "10133" "C02528" "C02528_m" "MAM03318" "MAM00614m" "dhcholestancoa" "CHEBI:15494" "" "HMDB0002159" "" "HC01332" "C04644" "LMST01010221" "MNXM162803;MNXM90923" "440420" "dhcholestancoa" "m00614m" "MAM00614" "MAM00570e" "" "" "" "" "" "" "C02355" "" "MNXM3150" "439715" "23cump" "m00570s" "MAM00570" "MAM00921e" "" "CHEBI:28895" "" "" "" "" "C01368" "" "MNXM2184" "101543" "3ump" "m00921s" "MAM00921" @@ -5820,7 +5789,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00943r" "" "" "CE2314" "HMDB0006840" "" "" "C15915" "LMST01010225" "MNXM5534" "23724604" "CE2314" "m00943r" "MAM00943" "MAM03377c" "CE6027" "" "CE6027" "" "" "" "" "" "MNXM164173" "" "CE6027" "CE6027_c" "MAM03377" "MAM03377m" "CE6027" "" "CE6027" "" "" "" "" "" "MNXM164173" "" "CE6027" "CE6027_m" "MAM03377" -"MAM03354c" "CE4837" "CHEBI:63548" "CE4837" "HMDB0006516" "" "" "C16171" "" "MNXM165171" "53477846" "CE4837" "CE4837_c" "MAM03354" "MAM00864r" "" "" "CE4833" "" "" "" "" "" "MNXM164263" "" "CE4833" "m00864r" "MAM00864" "MAM00870r" "" "" "CE4841" "" "" "" "" "" "MNXM164268" "" "CE4841" "m00870r" "MAM00870" "MAM00865r" "" "" "CE4845" "" "" "" "" "" "MNXM164264" "" "CE4845" "m00865r" "MAM00865" @@ -5844,12 +5812,9 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM03364r" "CE5160" "" "CE5160" "" "" "" "" "" "MNXM163191" "" "CE5160" "CE5160_r" "MAM03364" "MAM03365c" "CE5161" "" "CE5161" "" "" "" "" "" "MNXM163175" "" "CE5161" "CE5161_c" "MAM03365" "MAM03366c" "CE5162" "" "CE5162" "" "" "" "" "" "MNXM163591" "" "CE5162" "CE5162_c" "MAM03366" -"MAM03367m" "" "" "CE5168" "" "" "" "" "" "" "" "CE5168" "CE5168_m" "MAM03367" "MAM03367x" "" "" "CE5168" "" "" "" "" "" "" "" "CE5168" "CE5168_p" "MAM03367" "MAM03367c" "CE5168" "" "CE5168" "" "" "" "" "" "MNXM166027" "" "CE5168" "CE5168_c" "MAM03367" "MAM03368c" "" "CHEBI:27379" "CE5169" "HMDB0006891" "" "" "C05467" "" "" "440690" "CE5169" "CE5169_c" "MAM03368" -"MAM03368m" "" "CHEBI:27379" "CE5169" "HMDB0006891" "" "" "C05467" "" "" "440690" "CE5169" "CE5169_m" "MAM03368" -"MAM03368x" "" "CHEBI:27379" "CE5169" "HMDB0006891" "" "" "C05467" "" "" "440690" "CE5169" "CE5169_p" "MAM03368" "MAM01428e" "cdpea" "CHEBI:16732" "" "HMDB0001564" "" "HC00433" "C00570" "" "MNXM449" "123727" "cdpea" "m01428s" "MAM01428" "MAM00475e" "12dgr120" "" "" "" "" "" "" "" "MNXM4939" "" "12dgr120" "12dgr120_s" "MAM00475" "MAM02171g" "inost" "CHEBI:17268" "" "HMDB0000211" "" "HC00135" "C00137" "" "MNXM127" "892" "inost" "m02171g" "MAM02171" @@ -5874,14 +5839,13 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00687c" "" "" "CE5968" "" "" "" "" "" "MNXM161244" "" "CE5968" "m00687c" "MAM00687" "MAM00846c" "" "" "CE5966" "" "" "" "" "" "MNXM91381" "" "CE5966" "m00846c" "MAM00846" "MAM00691c" "" "" "CE5971" "" "" "" "" "" "MNXM162897" "" "CE5971" "m00691c" "MAM00691" -"MAM01123m" "" "" "CE2084" "" "" "" "" "" "MNXM162741" "" "CE7097" "m01123m" "MAM01123" -"MAM01123x" "" "" "CE2084" "" "" "" "" "" "MNXM162741" "" "CE7097" "m01123p" "MAM01123" +"MAM01123m" "" "" "CE7097" "" "" "" "" "" "MNXM162741" "" "CE7097" "m01123m" "MAM01123" +"MAM01123x" "" "" "CE7097" "" "" "" "" "" "MNXM162741" "" "CE7097" "m01123p" "MAM01123" "MAM01040n" "" "CHEBI:28209" "" "HMDB0011134" "" "" "C04805" "LMFA03060002" "MNXM38414" "5280733" "C04805" "m01040n" "MAM01040" "MAM01126m" "" "" "CE2084" "" "" "" "" "LMFA03060011" "MNXM94297" "1831" "CE2084" "m01126m" "MAM01126" "MAM01040x" "" "CHEBI:28209" "" "HMDB0011134" "" "" "C04805" "LMFA03060002" "MNXM38414" "5280733" "C04805" "m01040p" "MAM01040" "MAM01126x" "" "" "CE2084" "" "" "" "" "LMFA03060011" "MNXM94297" "1831" "CE2084" "m01126p" "MAM01126" "MAM02364n" "leuktrB4" "CHEBI:15647" "" "HMDB0001085" "" "HC02182" "C02165" "LMFA03020001" "MNXM162284;MNXM637" "5280492" "leuktrB4" "m02364n" "MAM02364" -"MAM03325c" "C08276" "CHEBI:1438" "" "HMDB0001527" "" "" "C08276" "" "MNXM2782" "563" "C08276" "C08276_c" "MAM03325" "MAM03510c" "ch4s" "" "" "" "" "" "" "" "MNXM652" "878" "ch4s" "ch4s_c" "MAM03510" "MAM03405c" "acryl" "" "" "" "" "" "" "" "MNXM1368" "6581" "acryl" "acryl_c" "MAM03405" "MAM00309m" "12HPET" "CHEBI:15626" "" "HMDB0004243" "" "" "C05965" "LMFA03060013" "MNXM13989;MNXM2765" "5280892" "12HPET" "m00309m" "MAM00309" @@ -5902,7 +5866,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM02649c" "" "" "CE6185" "" "" "" "" "" "MNXM65538" "53481589" "CE6185" "m02649c" "MAM02649" "MAM00420c" "" "" "CE6183" "" "" "" "" "" "MNXM33740" "53481487" "CE6183" "m00420c" "MAM00420" "MAM00581c" "" "" "CE6187" "" "" "" "" "" "MNXM35480" "" "CE6187" "m00581c" "MAM00581" -"MAM03332c" "CE2516" "CHEBI:53486" "CE2516" "HMDB0002925" "" "" "C03242" "" "MNXM5607" "5280581" "CE2516" "CE2516_c" "MAM03332" "MAM02785n" "prostge1" "CHEBI:15544" "" "HMDB0001442" "" "HC02211" "C04741" "LMFA03010134" "MNXM162507;MNXM3344" "5280723" "prostge1" "m02785n" "MAM02785" "MAM02793n" "" "" "CE6234" "" "" "" "" "" "MNXM78300" "5283048" "CE6234" "m02793n" "MAM02793" "MAM00329m" "" "" "CE5525" "" "" "" "" "" "MNXM33276" "53481457" "CE5525" "m00329m" "MAM00329" @@ -5968,7 +5931,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM03489e" "c10dc" "" "" "" "" "" "" "" "MNXM162993" "" "c10dc" "c10dc_s" "MAM03489" "MAM00181c" "" "CHEBI:28325" "" "" "" "HC01403" "C05264" "LMFA07050014" "MNXM674" "11966158" "3hdcoa" "m00181c" "MAM00181" "MAM03204c" "3deccrn" "" "" "" "" "" "" "" "MNXM150909" "" "3deccrn" "3deccrn_c" "MAM03204" -"MAM03540c" "ddeccrn" "" "" "" "" "" "" "" "" "168381" "ddeccrn" "ddeccrn_c" "MAM03540" "MAM00042c" "dd2coa" "CHEBI:15471" "" "" "" "HC01078" "C03221" "LMFA07050010" "MNXM642" "45266564" "dd2coa" "m00042c" "MAM00042" "MAM03541c" "ddece1crn" "" "" "" "" "" "" "" "" "" "ddece1crn" "ddece1crn_c" "MAM03541" "MAM03491x" "c12dccoa" "CHEBI:76315" "" "" "" "" "" "" "" "" "c12dccoa" "c12dccoa_p" "MAM03491" @@ -6034,7 +5996,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM03502e" "c8dc" "" "" "" "" "" "" "" "MNXM162999" "" "c8dc" "c8dc_s" "MAM03502" "MAM01648r" "" "CHEBI:30813" "" "HMDB0000511" "" "HC02175" "C01571" "LMFA01010010" "MNXM1043;MNXM162295" "2969" "dca" "m01648r" "MAM01648" "MAM03202e" "3ddcrn" "" "" "" "" "" "" "" "MNXM150910" "" "3ddcrn" "3ddcrn_s" "MAM03202" -"MAM03540e" "ddeccrn" "" "" "" "" "" "" "" "" "168381" "ddeccrn" "ddeccrn_s" "MAM03540" "MAM03541e" "ddece1crn" "" "" "" "" "" "" "" "" "" "ddece1crn" "ddece1crn_s" "MAM03541" "MAM03204e" "3deccrn" "" "" "" "" "" "" "" "MNXM150909" "" "3deccrn" "3deccrn_s" "MAM03204" "MAM03544e" "decdicrn" "" "" "" "" "" "" "" "" "53481669" "decdicrn" "decdicrn_s" "MAM03544" @@ -6208,7 +6169,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM02741e" "pan4p" "CHEBI:16858" "" "" "" "HC00681" "C01134" "" "MNXM373" "987" "pan4p" "m02741s" "MAM02741" "MAM03933e" "slfcys" "CHEBI:27891" "" "HMDB0000731" "" "" "C05824" "" "MNXM2428" "115015" "slfcys" "slfcys_s" "MAM03933" "MAM01828e" "fmn" "CHEBI:17621" "" "HMDB0001520" "" "HC00064" "C00061" "" "MNXM119" "643976" "fmn" "m01828s" "MAM01828" -"MAM02679e" "ptth" "CHEBI:15525" "" "HMDB0001338" "" "HC00554" "C00154" "" "MNXM1154" "15667" "ptth" "m02679s" "MAM02679" +"MAM02679e" "ptth" "CHEBI:16753" "" "HMDB0003426" "" "HC00554" "C00154" "" "MNXM1154" "439322" "ptth" "m02679s" "MAM02679" "MAM03102e" "q10h2" "CHEBI:17976" "" "" "" "HC00324" "C00390" "" "MNXM9200" "9962735" "q10h2" "m03102s" "MAM03102" "MAM02439x" "mal__L" "CHEBI:30797" "" "HMDB0000156" "" "HC00146" "C00149" "" "MNXM98" "222656" "mal_L" "m02439p" "MAM02439" "MAM03933c" "slfcys" "CHEBI:27891" "" "HMDB0000731" "" "" "C05824" "" "MNXM2428" "115015" "slfcys" "slfcys_c" "MAM03933" @@ -6260,7 +6221,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM02639e" "odecrn" "" "" "HMDB0005065" "" "" "" "" "MNXM65475;MNXM8956" "" "odecrn" "m02639s" "MAM02639" "MAM02940e" "stcrn" "" "" "" "" "" "" "LMFA07070008" "MNXM82716;MNXM9119" "6426855" "stcrn" "m02940s" "MAM02940" "MAM02411e" "pmtcrn" "CHEBI:17490" "" "HMDB0000222" "" "HC01034" "C02990" "LMFA07070004" "MNXM162587;MNXM787" "11953816" "pmtcrn" "m02411s" "MAM02411" -"MAM02676e" "hdcecrn" "" "" "" "" "HC10854" "" "" "MNXM8716" "11953816" "hdcecrn" "m02676s" "MAM02676" +"MAM02676e" "hdcecrn" "" "" "" "" "HC10854" "" "" "MNXM8716" "129849228" "hdcecrn" "m02676s" "MAM02676" "MAM01620e" "pcreat" "CHEBI:58092" "" "" "" "" "C02305" "" "MNXM819;MNXM90130;MNXM91273" "9548602" "pcreat" "m01620s" "MAM01620" "MAM01580e" "" "CHEBI:32805" "" "" "" "HC00342" "C00417" "" "MNXM162425;MNXM813" "309" "HC00342" "m01580s" "MAM01580" "MAM01372e" "" "CHEBI:48131" "" "HMDB0000784" "" "" "C08261" "LMFA01170054" "MNXM164574" "2266" "C08261" "m01372s" "MAM01372" @@ -6425,7 +6386,7 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM00784e" "3hmp" "CHEBI:37373" "" "HMDB0000023" "" "HC00705" "C06001" "" "MNXM396" "440873" "3hmp" "m00784s" "MAM00784" "MAM03234c" "3hpppnohgluc" "" "" "" "" "" "" "" "" "" "3hpppnohgluc" "3hpppnohgluc_c" "MAM03234" "MAM03234e" "3hpppnohgluc" "" "" "" "" "" "" "" "" "" "3hpppnohgluc" "3hpppnohgluc_s" "MAM03234" -"MAM03232c" "3hpppn" "CHEBI:57277" "" "" "" "" "" "" "MNXM1634" "" "3hpppn" "3hpppn_c" "MAM03232" +"MAM03232c" "3hpppn" "CHEBI:57277" "" "" "" "" "" "" "MNXM1634" "" "3hpppn" "3hpppn_c;MAM03231c" "MAM03232" "MAM03233c" "3hpppnoh" "" "" "" "" "" "" "" "" "" "3hpppnoh" "3hpppnoh_c" "MAM03233" "MAM02142e" "3hpp" "CHEBI:33404" "" "HMDB0000700" "" "HC00625" "C01013" "" "MNXM872" "68152" "3hpp" "m02142s" "MAM02142" "MAM03247e" "3mhis" "CHEBI:70959" "" "" "" "" "" "" "" "" "3mhis" "3mhis_s" "MAM03247" @@ -6482,7 +6443,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM01392e" "" "CHEBI:37084" "CE2028" "HMDB0000754" "" "" "" "" "MNXM36533" "69362" "CE2028" "m01392s" "MAM01392" "MAM00830e" "" "" "CE2176" "HMDB0001434" "" "" "" "" "MNXM10073" "1670" "CE2176" "m00830s" "MAM00830" "MAM01172e" "" "CHEBI:63981" "CE2445" "HMDB0005087" "" "" "" "LMFA03020013" "MNXM48977" "5283128" "CE2445" "m01172s" "MAM01172" -"MAM03332e" "" "CHEBI:53486" "CE2516" "HMDB0002925" "" "" "C03242" "" "" "5280581" "CE2516" "CE2516_s" "MAM03332" "MAM00378e" "" "" "CE2537" "" "" "" "" "LMFA03050007" "MNXM165539;MNXM33401" "1437" "CE2537" "m00378s" "MAM00378" "MAM03569e" "eidi1114ac" "CHEBI:603631" "" "HMDB0005060" "" "" "C16525" "" "" "6439848" "eidi1114ac" "eidi1114ac_s" "MAM03569" "MAM00384e" "" "" "CE5304" "" "" "" "" "" "MNXM33412" "5283052" "CE5304" "m00384s" "MAM00384" @@ -6589,7 +6549,6 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM03215e" "3hcinnm" "" "" "" "" "" "" "" "MNXM1799" "" "3hcinnm" "3hcinnm_s" "MAM03215" "MAM03215c" "3hcinnm" "" "" "" "" "" "" "" "MNXM1799" "" "3hcinnm" "3hcinnm_c" "MAM03215" "MAM03231e" "" "" "" "" "" "" "" "" "" "" "3hppa" "3hppa_s" "MAM03231" -"MAM03231c" "" "CHEBI:57277" "" "" "" "" "" "" "" "" "3hppa" "3hppa_c" "MAM03231" "MAM02622e" "normete__L" "CHEBI:144308" "" "HMDB0000819" "" "" "C05589" "" "MNXM3674" "1237" "normete_L" "m02622s" "MAM02622" "MAM00400e" "" "CHEBI:776" "" "HMDB0000335" "" "" "C05300" "LMST02010041" "MNXM3794" "115116" "C05300" "m00400s" "MAM00400" "MAM01698e" "dhbpt" "" "" "" "" "HC00242" "C00268" "" "MNXM162257;MNXM90267" "1879" "dhbpt" "m01698s" "MAM01698" @@ -8161,6 +8120,9 @@ mets metBiGGID metChEBIID metEHMNID metHMDBID metHMR2ID metHepatoNET1ID metKEGGI "MAM02583n" "" "CHEBI:17154" "" "" "" "" "" "" "MNXM216" "" "" "" "MAM02583" "MAM20063n" "" "CHEBI:77017" "" "" "" "" "" "" "MNXM166986" "" "" "" "MAM20063" "MAM20062n" "" "CHEBI:142723" "" "" "" "" "" "" "MNXM117128" "" "" "" "MAM20062" +"MAM01435m" "" "CHEBI:16755" "" "HMDB0000518" "" "HC00958" "C02528" "LMST04010032" "MNXM1183" "10133" "HC00958" "MAM03318m" "MAM01435" +"MAM01729e" "" "" "" "HMDB0002250" "" "" "" "" "MNXM51468;MNXM588354" "168381" "M01729" "MAM03540e" "MAM01729" +"MAM00853c" "" "" "CE4820" "" "" "" "" "" "MNXM164259" "" "CE4820" ";MAM00902c" "MAM00853" "MAM15003c" "" "CHEBI:58585" "" "" "" "" "C05519" "" "MNXM2125" "7864" "" "" "MAM15003" "MAM01104x" "" "CHEBI:250388" "" "" "" "" "C11821" "" "MNXM1137" "" "" "" "MAM01104" "MAM10018x" "" "CHEBI:58639" "" "" "" "" "C12248" "" "MNXM1805" "" "" "" "MAM10018" diff --git a/model/reactions.tsv b/model/reactions.tsv index 7222e3f..3112b13 100644 --- a/model/reactions.tsv +++ b/model/reactions.tsv @@ -144,7 +144,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR08517" "MGSA2" "" "HMR_8517" "" "R01016" "MNXR101551;MNXR101552" "" "RCR11086" "MGSA2" "HMR_8517" "" "RHEA:17937" "" 0 "MAR04280" "LDH_Lm" "R00703C" "HMR_4280" "r0172" "R00703" "MNXR101040" "" "RCR11087" "LDH_Lm" "HMR_4280" "" "RHEA:23444" "" 0 "MAR00153" "ACS2" "" "HMR_0153" "r0218" "R00925" "MNXR106753;MNXR95222" "" "RCR10460" "ACS2" "HMR_0153" "RHEA:20374" "RHEA:20373" "" 0 -"MAR03212" "PPCOAOm" "" "HMR_3212" "" "R00924" "MNXR103101" "" "RCR11088" "PPCOAOm" "HMR_3212" "" "" "" 0 +"MAR03212" "PPCOAOm" "" "HMR_3212;HMR_3211" "r0683" "R00924" "MNXR103101" "" "RCR11088;RCR14348" "PPCOAOm;r0683" "HMR_3212;MAR03211" "" "" "" 0 "MAR03797" "ACCOALm" "" "HMR_3797" "r0219" "R00925" "MNXR106753;MNXR95222" "" "RCR14211" "ACCOALm" "HMR_3797" "RHEA:20376" "RHEA:20373" "" 0 "MAR03800" "OBDHm" "" "HMR_3800" "r1154" "" "MNXR102133" "" "RCR10461" "r1154" "HMR_3800" "" "" "" 0 "MAR04105" "MCD" "" "HMR_4105" "r0063" "R00233" "MNXR101412" "" "RCR10285" "MCD" "HMR_4105" "RHEA:18782" "RHEA:18781" "" 0 @@ -337,7 +337,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR04672" "" "" "HMR_4672" "" "R02325" "" "" "RCR10128" "HMR_4672" "HMR_4672" "" "RHEA:22680" "" 0 "MAR04676" "" "R02372E" "HMR_4676" "r0531" "R02372" "MNXR97821" "" "RCR11173" "r0531" "HMR_4676" "" "" "" 0 "MAR04736" "DHPM2" "R03055C" "HMR_4736" "r0593" "R03055" "MNXR107917;MNXR97433" "" "RCR11174" "DHPM2" "HMR_4736" "" "" "" 0 -"MAR04819" "BUP2" "R04666C" "HMR_4819" "r0710" "R04666" "MNXR109033;MNXR96346" "" "RCR11175" "" "HMR_4819" "" "" "" 0 +"MAR04819" "BUP2" "R04666C" "HMR_4819" "r0710" "R04666" "MNXR109033;MNXR96346" "" "RCR11175" "BUP2" "HMR_4819;BUP2;MAR00096" "" "" "" 0 "MAR05299" "URIK1" "R00964E" "HMR_5299" "r1115" "R00964" "MNXR105162" "" "RCR11176" "URIK1" "HMR_5299" "RHEA:16826" "RHEA:16825" "" 0 "MAR05352" "" "R02332E" "HMR_5352" "r1156" "R02332" "MNXR97823" "" "RCR11177" "r1156" "HMR_5352" "" "" "" 0 "MAR05415" "" "R02018M" "HMR_5415" "r1431" "R02017" "MNXR104066" "" "RCR11178" "" "HMR_5415" "" "RHEA:28034" "" 0 @@ -450,7 +450,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR08473" "DADNK" "" "HMR_8473" "" "R02556" "MNXR97079" "" "RCR30169" "DADAe" "HMR_8473" "" "RHEA:28190" "" 0 "MAR08474" "ATPH1e" "" "HMR_8474" "" "R00085" "MNXR96128" "" "RCR30513" "ATPH1e" "HMR_8474" "RHEA:20989" "RHEA:20988" "" 0 "MAR08481" "DGSNtm" "" "HMR_8481" "" "" "MNXR97324" "" "RCR11232" "DGK2m" "HMR_8481" "" "" "" 0 -"MAR08482" "TRDRm" "" "HMR_8482" "" "R02016" "MNXR104766" "" "RCR11233" "TRDRm" "HMR_8482" "" "RHEA:20345" "" 0 +"MAR08482" "TRDRm" "" "HMR_8482" "" "R02016" "MNXR104766" "" "RCR11233" "TRDRm;r1433" "HMR_8482;MAR02358" "" "RHEA:20345" "" 0 "MAR08483" "EBASTINEOHte" "" "HMR_8483" "" "R02100" "MNXR97869" "" "RCR14276" "DUTPDPn" "HMR_8483" "RHEA:10249" "RHEA:10248" "" 0 "MAR08484" "INSKm" "" "HMR_8484" "" "R01131" "MNXR100845" "" "RCR11234" "INSKm" "HMR_8484" "RHEA:21141" "RHEA:21140" "" 0 "MAR08485" "NDP7g" "" "HMR_8485" "" "R00155" "MNXR101931" "" "RCR11235" "NDP7g" "HMR_8485" "RHEA:64877" "RHEA:64876" "" 0 @@ -497,7 +497,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR03833" "P5CR" "R01251C" "HMR_3833" "r0305" "R01251" "MNXR102302" "" "RCR11261" "P5CR" "HMR_3833" "" "RHEA:14109" "" 0 "MAR03835" "PRO1xm" "R01248C" "HMR_3835" "r0304" "R01248" "MNXR102303" "" "RCR10307" "PRO1x" "HMR_3835" "" "RHEA:14105" "" 0 "MAR03837" "PRO1xm" "" "HMR_3837" "" "R01248" "MNXR102303" "" "RCR10308" "P5CRxm;PRO1xm" "HMR_3837" "" "RHEA:14105" "" 0 -"MAR03838" "" "" "HMR_3838" "r1453" "" "" "" "RCR14286" "" "HMR_3838" "" "" "" 0 "MAR03895" "GLU5Km" "R00239C" "HMR_3895" "r0072" "R00239" "MNXR100277" "" "RCR11262" "GLU5Km" "HMR_3895" "" "RHEA:14877" "" 0 "MAR03897" "G5SDym" "R03313C" "HMR_3897" "r0619" "R03313" "MNXR99896" "" "RCR14287" "G5SDym" "HMR_3897" "" "RHEA:19541" "" 0 "MAR03956" "HCO3Em" "" "HMR_3956" "" "R10092" "MNXR100482" "" "RCR10097" "H2CO3Dm" "HMR_3956" "RHEA:10750" "RHEA:10748" "" 0 @@ -554,17 +553,17 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR08608" "DRIBt" "" "HMR_8608" "" "R02894" "MNXR97783" "" "RCR14308" "HMR_8608" "HMR_8608" "" "" "" 0 "MAR08609" "P5CRm" "" "HMR_8609" "" "R01251" "MNXR102302" "" "RCR10244" "P5CRm" "HMR_8609" "" "RHEA:14109" "" 0 "MAR08610" "PROD2" "" "HMR_8610" "" "R10507" "MNXR103187" "" "RCR10316" "PROD2" "HMR_8610" "" "" "" 0 -"MAR08611" "PROD2m" "" "HMR_8611" "" "R10507" "MNXR103187" "" "RCR11294" "PROD2m" "HMR_8611" "" "" "" 0 +"MAR08611" "PROD2m" "" "HMR_8611;HMR_3838" "r1453" "R10507" "MNXR103187" "" "RCR11294;RCR14286" "PROD2m" "HMR_8611;HMR_3838;MAR03838" "" "" "" 0 "MAR04285" "" "R00713C" "HMR_4285" "r0178" "R00713" "MNXR104540" "" "RCR11295" "r0178" "HMR_4285" "RHEA:13218" "RHEA:13217" "" 0 "MAR00457" "" "R01514C" "HMR_0457" "r0339" "R01514" "MNXR100328" "" "RCR11296" "r0339" "HMR_0457" "RHEA:23517" "RHEA:23516" "" 0 "MAR00460" "" "R01514C" "HMR_0460" "r0340" "R01514" "MNXR100328" "" "RCR11297" "r0340" "HMR_0460" "RHEA:23517" "RHEA:23516" "" 0 "MAR03750" "" "RE2429M" "HMR_3750" "" "" "MNXR103672" "" "RCR14309" "RE2429M" "HMR_3750" "" "" "" 0 -"MAR03752" "ACOAD9m" "" "HMR_3752" "" "" "" "" "RCR14310" "ACOAD9m" "HMR_3752" "" "" "" 0 -"MAR03770" "ACOAD8m" "" "HMR_3770" "" "R04095" "" "" "RCR14311" "ACOAD8m" "HMR_3770" "" "" "" 0 +"MAR03752" "ACOAD9m" "R02660M" "HMR_3752;HMR_3751" "r0560" "R02660" "" "" "RCR14310;RCR14421" "ACOAD9m;r0560" "HMR_3752;HMR_3751;MAR03751" "" "" "" 0 +"MAR03770" "ACOAD8m" "R04095M" "HMR_3770;HMR_3769" "r0655" "R04095" "MNXR95318" "" "RCR14311;RCR14423" "ACOAD8m;r0655" "HMR_3770;HMR_3769;MAR03769" "" "" "" 0 "MAR03771" "" "RE2427M" "HMR_3771" "" "" "MNXR103670" "" "RCR14312" "RE2427M" "HMR_3771" "" "" "" 0 "MAR03772" "" "RE2111M" "HMR_3772" "" "" "MNXR103609" "" "RCR14313" "RE2111M" "HMR_3772" "" "" "" 0 "MAR03782" "" "RE2428M" "HMR_3782" "" "" "MNXR103671" "" "RCR14314" "RE2428M" "HMR_3782" "" "" "" 0 -"MAR03784" "ACOAD10m" "" "HMR_3784" "" "" "" "" "RCR11298" "ACOAD10m" "HMR_3784" "" "" "" 0 +"MAR03784" "ACOAD10m" "R03172M" "HMR_3784;HMR_3783" "r0603" "R03172" "MNXR108000" "" "RCR11298;RCR14424" "ACOAD10m;r0603" "HMR_3784;HMR_3783;MAR03783" "" "" "" 0 "MAR03839" "PGCD" "R01513C" "HMR_3839" "r0338" "R01513" "MNXR102527" "" "RCR11299" "PGCD" "HMR_3839" "" "RHEA:12641" "" 0 "MAR03841" "PSERT" "R04173C" "HMR_3841" "r0663" "R04173" "MNXR103225" "" "RCR11300" "PSERT" "HMR_3841" "" "RHEA:14329" "" 0 "MAR03843" "PSP_L" "R00582C" "HMR_3843" "r0159" "R00582" "MNXR103260" "" "RCR11301" "PSP_L" "HMR_3843" "" "RHEA:21208" "" 0 @@ -676,11 +675,8 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR08542" "TYRDOPO3" "" "HMR_8542" "" "R00045" "MNXR104992" "" "RCR11370" "TYRDOPO3" "HMR_8542" "RHEA:34288" "RHEA:34287" "" 0 "MAR08630" "T4HCINNOX" "" "HMR_8630" "" "" "MNXR104663" "" "RCR14345" "T4HCINNOX" "HMR_8630" "" "" "" 0 "MAR08540" "TYRASE" "" "HMR_8540" "" "" "MNXR104987" "" "RCR11371" "HMR_8540" "HMR_8540" "" "" "" 0 -"MAR09733" "" "" "HMR_9733" "" "R03674" "MNXR108330" "" "RCR14346" "HMR_9733" "HMR_9733" "" "" "" 0 -"MAR09734" "" "" "HMR_9734" "" "R04884" "MNXR109190" "" "RCR14347" "HMR_9734" "HMR_9734" "RHEA:33516" "RHEA:33515" "" 0 "MAR03206" "ACACT10m" "R00927M" "HMR_3206" "r0222" "R00927" "MNXR95195" "" "RCR11372" "ACACT10m" "HMR_3206" "" "RHEA:30719" "" 0 "MAR03208" "PPCOACm" "R01859C" "HMR_3208" "r0414" "R01859" "MNXR103100" "" "RCR11373" "PPCOACm" "HMR_3208" "RHEA:23721" "RHEA:23720" "" 0 -"MAR03211" "" "" "HMR_3211" "r0683" "R00924" "MNXR103101" "" "RCR14348" "r0683" "HMR_3211" "" "" "" 0 "MAR03213" "MMEm" "R02765M" "HMR_3213" "r0572" "R02765" "MNXR101657" "" "RCR11374" "MMEm" "HMR_3213" "RHEA:20555" "RHEA:20553" "" 0 "MAR03215" "MMMm" "R00833M" "HMR_3215" "r0197" "R00833" "MNXR101661" "" "RCR11375" "MMMm" "HMR_3215" "RHEA:22889" "RHEA:22888" "" 0 "MAR03747" "VALTA" "" "HMR_3747" "" "R01214" "MNXR96230" "" "RCR11376" "VALTA" "HMR_3747" "" "RHEA:24813" "" 0 @@ -694,8 +690,8 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR06417" "" "RE3326M" "HMR_6417" "r0561" "R02662" "MNXR107649;MNXR97451" "" "RCR14349" "RE3326M;r0561" "HMR_6417" "" "RHEA:18865" "" 0 "MAR06419" "" "R04225C" "HMR_6419" "r0670" "R04225" "MNXR108745;MNXR94911" "" "RCR11381" "r0670" "HMR_6419" "" "" "" 0 "MAR06420" "" "" "HMR_6420" "r0604" "R03174" "MNXR108002;MNXR97450" "" "RCR14350" "r0604" "HMR_6420" "" "" "" 0 -"MAR06421" "" "R01702C" "HMR_6421" "r0386" "R01702" "MNXR107132;MNXR95029" "" "RCR11382" "r0386" "HMR_6421" "" "" "" 0 -"MAR06422" "" "" "HMR_6422" "r0656" "R04097" "MNXR108654;MNXR97452" "" "RCR14351" "r0656" "HMR_6422" "" "" "" 0 +"MAR06421" "OIVD1m" "R01702C;R03171M" "HMR_6421;HMR_3767" "r0386;r0601" "R01702;R01651" "MNXR107132;MNXR95029;MNXR102172;MNXR107999" "" "RCR11382;RCR14422" "r0386;OIVD1m" "HMR_6421;HMR_3767;MAR03767_1" "" "RHEA:25177" "" 0 +"MAR06422" "OIVD1m" "R0317M" "HMR_6422;HMR_3767" "r0656;r0601" "R04097;R01651" "MNXR108654;MNXR97452;MNXR102172;MNXR107999" "" "RCR14351;RCR14422" "r0656;OIVD1m" "HMR_6422;MAR03767_2" "" "RHEA:25177" "" 0 "MAR06923" "LEUTA" "" "HMR_6923" "" "R01090" "MNXR96229" "" "RCR10325" "LEUTA" "HMR_6923" "" "RHEA:18321" "" 0 "MAR03765" "LEUTAm" "R01090C" "HMR_3765" "r0262" "R01090" "MNXR96229" "" "RCR11383" "LEUTAm" "HMR_3765" "" "RHEA:18321" "" 0 "MAR06925" "" "RE2292C" "HMR_6925" "" "" "MNXR103647" "" "RCR14353" "RE2292C" "HMR_6925" "" "" "" 0 @@ -718,8 +714,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR04232" "" "RE0549C" "HMR_4232" "" "" "MNXR103449" "" "RCR10536" "RE0549C" "HMR_4232" "" "" "" 0 "MAR04233" "" "" "HMR_4233" "r0645" "R03889" "MNXR95796" "" "RCR11396" "r0645" "HMR_4233" "" "RHEA:14469" "" 0 "MAR04235" "AMCOXO" "" "HMR_4235" "r0449" "R01938" "MNXR95807" "" "RCR11397" "AMCOXO" "HMR_4235" "" "" "" 0 -"MAR04242" "" "R02487M" "HMR_4242" "r0541" "R02487" "MNXR100293" "" "RCR14356" "r0541" "HMR_4242" "" "RHEA:30847" "" 0 -"MAR04243" "GLUTCOADHm" "" "HMR_4243" "" "R02487" "" "" "RCR11398" "GLUTCOADHm" "HMR_4243" "" "RHEA:30847" "" 0 +"MAR04243" "GLUTCOADHm" "R02487M" "HMR_4243;HMR_4242" "r0541" "R02487" "MNXR100293" "" "RCR11398;RCR14356" "GLUTCOADHm;r0541" "HMR_4243;HMR_4242;MAR04242" "" "RHEA:30847" "" 0 "MAR04244" "3HKYNAKGAT" "R04171C" "HMR_4244" "r0662" "R04171" "MNXR108708;MNXR94895" "" "RCR11399" "3HKYNAKGAT" "HMR_4244" "" "RHEA:65888" "" 0 "MAR04245" "" "" "HMR_4245" "r0647" "R03954" "MNXR105360;MNXR108552" "" "RCR11400" "r0647" "HMR_4245" "RHEA:65893" "RHEA:65892" "" 0 "MAR04246" "" "RE2349C" "HMR_4246" "" "" "" "" "RCR11401" "RE2349C" "HMR_4246" "" "" "" 0 @@ -851,7 +846,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR03995" "" "" "HMR_3995" "r0027" "R00116" "MNXR105303" "" "RCR11487" "r0027" "HMR_3995" "" "" "" 0 "MAR03996" "HMR_3996" "" "HMR_3996" "" "R00892" "MNXR106737" "" "RCR10546" "HMR_3996" "HMR_3996" "" "RHEA:20597" "" 0 "MAR04189" "" "R00533C" "HMR_4189" "r0142" "R00533" "MNXR104649" "" "RCR11488" "r0142" "HMR_4189" "RHEA:24601" "RHEA:24600" "" 0 -"MAR04302" "" "R00782C" "HMR_4302" "r0193" "R00782" "MNXR105313;MNXR96994" "" "RCR11489" "" "HMR_4302" "" "RHEA:24931" "" 0 +"MAR04302" "r0193" "R00782C" "HMR_4302" "r0193" "R00782" "MNXR105313;MNXR96994" "" "RCR11489" "r0193" "HMR_4302;r0193;MAR02027" "" "RHEA:24931" "" 0 "MAR04323" "" "R00891C" "HMR_4323" "r0210" "R00891" "MNXR105314;MNXR96986" "" "RCR11490" "r0210" "HMR_4323" "" "" "" 0 "MAR05381" "" "RE3009C" "HMR_5381" "" "R02021" "MNXR102376" "" "RCR10548" "RE3009C" "HMR_5381" "" "RHEA:11724" "" 0 "MAR05385" "" "" "HMR_5385" "" "R04420" "MNXR101759" "" "RCR14401" "MTRI" "HMR_5385" "RHEA:19990" "RHEA:19989" "" 0 @@ -922,17 +917,13 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR08689" "DASCBH" "" "HMR_8689" "" "R02923" "MNXR97151" "" "RCR14418" "DARGOp" "HMR_8689" "" "" "" 0 "MAR08690" "DPCOAPP" "" "HMR_8690" "" "R02457" "MNXR97763" "" "RCR14419" "DORNOp" "HMR_8690" "" "" "" 0 "MAR03748" "OIVD2m" "R03171M" "HMR_3748" "r0600" "R01210" "MNXR102173;MNXR107999" "" "RCR14420" "OIVD2m" "HMR_3748" "" "RHEA:13997" "" 0 -"MAR03751" "" "R02660M" "HMR_3751" "r0560" "R02660" "" "" "RCR14421" "r0560" "HMR_3751" "" "" "" 0 "MAR03753" "ECOAH2m" "R04224M" "HMR_3753" "r0669" "R04224" "MNXR97885" "" "RCR11518" "ECOAH12m;r0669" "HMR_3753" "" "RHEA:31175" "" 0 -"MAR03755" "r0779" "R03352M" "HMR_3755" "r0779" "R03352" "MNXR108112" "" "RCR11519" "r0779" "HMR_3755" "" "RHEA:20888" "" 0 +"MAR03755" "3HBCOAHLm;r0779" "R03352M" "HMR_3755" "r0779" "R03352" "MNXR108112;MNXR94891" "" "RCR11519" "3HBCOAHLm;r0779" "3HBCOAHLm;HMR_3755;MAR00042" "" "RHEA:20888" "" 0 "MAR03759" "r0643" "R03869C" "HMR_3759" "r0643" "R03869" "MNXR105358;MNXR95762" "" "RCR10556" "r0643" "HMR_3759" "" "RHEA:31043" "" 0 "MAR03763" "r0571" "" "HMR_3763" "r0571" "R02764" "MNXR105351" "" "RCR10557" "" "HMR_3763" "" "RHEA:17345" "" 0 -"MAR03767" "OIVD1m" "R03171M" "HMR_3767" "r0601" "R01651" "MNXR102172;MNXR107999" "" "RCR14422" "OIVD1m" "HMR_3767" "" "RHEA:25177" "" 0 -"MAR03769" "" "R04095M" "HMR_3769" "r0655" "R04095" "MNXR95318" "" "RCR14423" "r0655" "HMR_3769" "" "" "" 0 "MAR03773" "MCCCrm" "R04138M" "HMR_3773" "r0658" "R04138" "MNXR101411" "" "RCR11520" "MCCCrm" "HMR_3773" "" "RHEA:13589" "" 0 "MAR03775" "MGCHrm" "R02085M" "HMR_3775" "r0490" "R02085" "MNXR101513;MNXR107307" "" "RCR11521" "MGCHrm" "HMR_3775" "" "RHEA:21536" "" 0 "MAR03780" "OIVD3m" "R03171M" "HMR_3780" "r0602" "R03171" "MNXR102174;MNXR107999" "" "RCR10345" "OIVD3m" "HMR_3780" "" "RHEA:30907" "" 0 -"MAR03783" "" "R03172M" "HMR_3783" "r0603" "R03172" "MNXR108000" "" "RCR14424" "r0603" "HMR_3783" "" "" "" 0 "MAR03785" "ECOAH9m" "R04204M" "HMR_3785" "r0665" "R04204" "MNXR97894" "" "RCR11522" "ECOAH9m" "HMR_3785" "" "RHEA:31119" "" 0 "MAR03790" "r0644" "R03871C" "HMR_3790" "r0644" "R03871" "MNXR105359;MNXR108490" "" "RCR10558" "r0644" "HMR_3790" "" "" "" 0 "MAR03792" "" "R02048M" "HMR_3792" "r0483" "R02048" "MNXR105346" "" "RCR11523" "3AIBTm;r0483" "HMR_3792" "" "" "" 0 @@ -1092,7 +1083,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR05170" "" "" "HMR_5170" "" "" "" "" "RCR14472" "HMR_5170" "HMR_5170" "" "" "" 0 "MAR05171" "" "" "HMR_5171" "" "" "" "" "RCR14473" "HMR_5171" "HMR_5171" "" "" "" 0 "MAR05172" "" "" "HMR_5172" "r1402" "" "" "" "RCR14474" "HMR_5172;r1402" "HMR_5172" "" "" "" 0 -"MAR05173" "" "" "HMR_5173" "" "" "" "" "RCR14475" "HMR_5173" "HMR_5173" "" "" "" 0 "MAR05174" "" "" "HMR_5174" "" "" "" "" "RCR14476" "HMR_5174" "HMR_5174" "" "" "" 0 "MAR07282" "" "" "HMR_7282" "" "" "" "" "RCR11617" "" "HMR_7282" "" "" "" 0 "MAR07616" "" "" "HMR_7616" "" "" "" "" "RCR10348" "HMR_7616" "HMR_7616" "" "" "" 0 @@ -1129,7 +1119,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR05286" "" "" "HMR_5286" "" "" "" "" "RCR11641" "HMR_5286" "HMR_5286" "" "" "" 0 "MAR05287" "" "" "HMR_5287" "" "" "" "" "RCR11642" "HMR_5287" "HMR_5287" "" "" "" 0 "MAR05288" "" "" "HMR_5288" "r1403" "" "" "" "RCR10594" "r1403" "HMR_5288" "" "" "" 0 -"MAR05289" "" "" "HMR_5289" "" "" "" "" "RCR14478" "HMR_5289" "HMR_5289" "" "" "" 0 "MAR05290" "" "" "HMR_5290" "" "" "" "" "RCR11643" "HMR_5290" "HMR_5290" "" "" "" 0 "MAR05291" "" "" "HMR_5291" "" "" "" "" "RCR11644" "HMR_5291" "HMR_5291" "" "" "" 0 "MAR09817" "" "" "HMR_9817" "" "" "" "" "RCR10595" "HMR_9817" "HMR_9817" "" "" "" 0 @@ -1168,12 +1157,11 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR04454" "ACONT" "R01324C" "HMR_4454" "r0315" "R01324" "MNXR95384" "" "RCR10028" "ACONT" "HMR_4454" "" "RHEA:10336" "" 0 "MAR04458" "" "R01325C" "HMR_4458" "r0317" "R01325" "MNXR105321;MNXR95386" "" "RCR10106" "r0317" "HMR_4458" "RHEA:10231" "RHEA:10228" "" 0 "MAR04589" "" "R01900C" "HMR_4589" "r0426" "R01900" "MNXR105342;MNXR95387" "" "RCR10352" "r0426" "HMR_4589" "" "RHEA:22144" "" 0 -"MAR04652" "r0509" "R02164C" "HMR_4652" "r0509" "R02164" "MNXR107340" "" "RCR14481" "r0509" "HMR_4652" "" "RHEA:13713" "" 0 +"MAR04652" "r0509;SUCD1m" "R02164C" "HMR_4652;HMR_8743" "r0509" "R00408;R02164" "MNXR107340;MNXR99636" "" "RCR14481;RCR11674" "r0509;SUCD1m" "HMR_4652;HMR_8743;MAR08743" "" "RHEA:13713;RHEA:30343" "" 0 "MAR06413" "" "R03316M" "HMR_6413" "r0620" "R03316" "MNXR105357;MNXR108089" "" "RCR11672" "r0620" "HMR_6413" "" "" "" 0 "MAR06414" "" "R02570C" "HMR_6414" "r0556" "R02570" "MNXR107585;MNXR95656" "" "RCR14482" "r0556" "HMR_6414" "" "RHEA:15213" "" 0 "MAR07704" "GLXO2p" "" "HMR_7704" "" "R00466" "MNXR100305" "" "RCR10605" "GLXO2p" "HMR_7704" "" "RHEA:14837" "" 0 "MAR07706" "GLYCTO1p" "" "HMR_7706" "" "R00475" "MNXR100338" "" "RCR11673" "GLYCTO1p" "HMR_7706" "" "RHEA:25311" "" 0 -"MAR08743" "SUCD1m" "" "HMR_8743" "" "R00408" "MNXR99636" "" "RCR11674" "SUCD1m" "HMR_8743" "" "RHEA:30343" "" 0 "MAR08773" "FBP" "" "HMR_8773" "" "R01785" "MNXR99465" "" "RCR14483" "FBA4" "HMR_8773" "" "" "" 0 "MAR08774" "HPYRDC" "" "HMR_8774" "" "R01393" "MNXR100700" "" "RCR11676" "HPYRDC" "HMR_8774" "" "RHEA:20561" "" 0 "MAR08775" "GCC2am" "" "HMR_8775" "" "R01333" "MNXR100065" "" "RCR11677" "GCALDD" "HMR_8775" "RHEA:20002" "RHEA:20001" "" 0 @@ -1341,7 +1329,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR02179" "" "R04543C" "HMR_2179" "r0696" "R04543" "MNXR94946" "" "RCR11798" "r0696" "HMR_2179" "" "" "" 0 "MAR02180" "" "R04544C" "HMR_2180" "r0697" "R04544" "MNXR94881" "" "RCR11799" "r0697" "HMR_2180" "" "" "" 0 "MAR02181" "" "R04970C" "HMR_2181" "r0773" "R04970" "MNXR109259" "" "RCR11800" "r0773" "HMR_2181" "RHEA:41913" "RHEA:41912" "" 0 -"MAR04156" "ACCOAC" "R00742C" "HMR_4156" "r0184" "R00742" "MNXR95219" "" "RCR10617" "ACCOAC" "HMR_4156" "RHEA:11309" "RHEA:11308" "" 0 "MAR04295" "ACCOACrm" "R00742C" "HMR_4295" "r0185" "R00742" "MNXR95219" "" "RCR11801" "ACCOACm" "HMR_4295" "RHEA:11309" "RHEA:11308" "" 0 "MAR02227" "" "" "HMR_2227" "" "" "" "" "RCR10098" "HMR_2227" "HMR_2227" "" "" "" 0 "MAR02228" "" "" "HMR_2228" "" "" "" "" "RCR11802" "HMR_2228" "HMR_2228" "" "" "" 0 @@ -1574,7 +1561,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR02395" "" "" "HMR_2395" "" "" "" "" "RCR12032" "HMR_2395" "HMR_2395" "" "" "" 0 "MAR02397" "" "RE3154C" "HMR_2397" "" "" "MNXR103810" "" "RCR12033" "RE3154C" "HMR_2397" "" "" "" 0 "MAR02399" "" "RE3155C" "HMR_2399" "" "" "MNXR103811" "" "RCR12034" "RE3155C" "HMR_2399" "" "" "" 0 -"MAR02401" "" "RE3150C" "HMR_2401" "" "" "MNXR103806" "" "RCR12035" "" "HMR_2401" "" "" "" 0 +"MAR02401" "RE3150C" "RE3150C" "HMR_2401" "" "" "MNXR103806" "" "RCR12035" "RE3150C" "HMR_2401;RE3150C;MAR03441" "" "" "" 0 "MAR02403" "" "" "HMR_2403" "" "" "" "" "RCR12036" "HMR_2403" "HMR_2403" "" "" "" 0 "MAR02408" "" "RE3157X" "HMR_2408" "" "" "" "" "RCR12037" "RE3157X" "HMR_2408" "" "" "" 0 "MAR02409" "" "RE3159X" "HMR_2409" "" "" "" "" "RCR12038" "RE3159X" "HMR_2409" "" "" "" 0 @@ -1623,7 +1610,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR00931" "" "RE3650C" "HMR_0931" "" "" "" "" "RCR12080" "HMR_0931" "HMR_0931" "" "" "" 0 "MAR00932" "" "RE3646C" "HMR_0932" "" "" "" "" "RCR12081" "HMR_0932" "HMR_0932" "" "" "" 0 "MAR00933" "" "RE3648C" "HMR_0933" "" "" "" "" "RCR12082" "HMR_0933" "HMR_0933" "" "" "" 0 -"MAR00934" "" "RE3651C" "HMR_0934" "" "" "" "" "RCR12083" "" "HMR_0934" "" "" "" 0 +"MAR00934" "" "R07041C;RE3651C" "HMR_0934;HMR_0941" "" "R07041" "MNXR110751" "" "RCR12083;RCR12090" "" "HMR_0934;HMR_0941;MAR00941" "" "" "" 0 "MAR00935" "" "RE3647C" "HMR_0935" "" "" "" "" "RCR12084" "HMR_0935" "HMR_0935" "" "" "" 0 "MAR00936" "" "RE3649C" "HMR_0936" "" "" "" "" "RCR12085" "HMR_0936" "HMR_0936" "" "" "" 0 "MAR00937" "" "R07054C" "HMR_0937" "" "R07054" "MNXR110764" "" "RCR12086" "HMR_0937" "HMR_0937" "" "" "" 0 @@ -1915,7 +1902,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR02591" "CSNATr" "R02396C" "HMR_2591" "r0534" "R02396" "MNXR96926" "" "RCR12360" "CSNATr" "HMR_2591" "" "RHEA:21136" "" 0 "MAR02594" "C30CPT1" "" "HMR_2594" "r1396" "" "" "" "RCR12361" "C30CPT1" "HMR_2594" "" "" "" 0 "MAR02599" "" "R01923X" "HMR_2599" "r0431" "R01923" "MNXR105343;MNXR107232" "" "RCR12362" "r0431" "HMR_2599" "" "RHEA:12661" "" 0 -"MAR02602" "HMR_2602" "" "HMR_2602" "" "" "" "" "RCR12363" "HMR_2602" "HMR_2602" "" "" "" 0 +"MAR02602" "C120CPT1;HMR_2602" "" "HMR_2602" "" "" "" "" "RCR12363" "C120CPT1;HMR_2602" "C120CPT1;HMR_2602;MAR04506" "" "" "" 0 "MAR02605" "" "" "HMR_2605" "" "" "" "" "RCR12364" "HMR_2605" "HMR_2605" "" "" "" 0 "MAR02608" "HMR_2608" "" "HMR_2608" "" "" "" "" "RCR12365" "HMR_2608" "HMR_2608" "" "" "" 0 "MAR02611" "HMR_2611" "" "HMR_2611" "" "" "" "" "RCR12366" "HMR_2611" "HMR_2611" "" "" "" 0 @@ -2222,7 +2209,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR00001" "" "" "HMR_0001" "" "" "" "R-HSA-174757" "RCR30273" "HMR_0001" "HMR_0001" "" "" "" 0 "MAR00003" "" "" "HMR_0003" "" "R02687" "" "" "RCR30275" "HMR_0003" "HMR_0003" "" "" "" 0 "MAR00005" "" "" "HMR_0005" "" "R01351" "" "" "RCR12493" "HMR_0005" "HMR_0005" "" "RHEA:34019" "" 0 -"MAR00449" "" "" "HMR_0449" "" "R00848" "MNXR99875" "R-HSA-188467" "RCR12494" "GLYC3PFADm" "HMR_0449" "" "RHEA:31283" "" 0 +"MAR00449" "" "" "HMR_0449;HMR_0483" "r0205" "R00848;R00849" "MNXR99875;MNXR106713" "R-HSA-188467" "RCR12494;RCR21050" "GLYC3PFADm;r0205" "HMR_0449;HMR_0483" "" "RHEA:31283;RHEA:18977" "" 0 "MAR00604" "DAGK_hs" "" "HMR_0604" "" "R02240" "" "" "RCR14512" "DAGK_hs" "HMR_0604" "" "RHEA:10272" "" 0 "MAR00605" "" "" "HMR_0605" "r1223" "R02251" "" "" "RCR12495" "HMR_0605" "HMR_0605" "" "RHEA:10868" "" 0 "MAR00665" "" "" "HMR_0665" "r1224" "R02250" "" "" "RCR14513" "HMR_0665" "HMR_0665" "" "" "" 0 @@ -2320,11 +2307,9 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR03352" "" "" "HMR_3352" "" "" "" "" "RCR12573" "HMR_3352" "HMR_3352" "" "" "" 0 "MAR03353" "" "" "HMR_3353" "" "" "" "" "RCR12574" "HMR_3353" "HMR_3353" "" "" "" 0 "MAR03355" "DCIm" "" "HMR_3355" "" "R04100" "MNXR97183" "" "RCR12575" "FAOXC121x" "HMR_3355" "RHEA:23719" "RHEA:23716" "" 0 -"MAR03364" "" "RE2913X" "HMR_3364" "" "" "" "" "RCR12576" "" "HMR_3364" "" "" "" 0 "MAR03365" "" "RE2919X" "HMR_3365" "" "" "" "" "RCR12577" "RE2919X" "HMR_3365" "" "" "" 0 "MAR03367" "" "RE2908X" "HMR_3367" "" "" "" "" "RCR12578" "RE2908X" "HMR_3367" "" "" "" 0 "MAR03368" "" "RE2916X" "HMR_3368" "" "" "" "" "RCR12579" "RE2916X" "HMR_3368" "" "" "" 0 -"MAR03369" "" "RE2914X" "HMR_3369" "" "" "" "" "RCR12580" "" "HMR_3369" "" "" "" 0 "MAR03370" "" "RE2920X" "HMR_3370" "" "" "" "" "RCR12581" "RE2920X" "HMR_3370" "" "" "" 0 "MAR03372" "" "RE2909X" "HMR_3372" "" "" "" "" "RCR12582" "RE2909X" "HMR_3372" "" "" "" 0 "MAR03373" "" "RE2917X" "HMR_3373" "" "" "" "" "RCR12583" "RE2917X" "HMR_3373" "" "" "" 0 @@ -2347,16 +2332,13 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR03513" "" "RE3092X" "HMR_3513" "" "" "" "" "RCR12603" "RE3092X" "HMR_3513" "" "" "" 0 "MAR03514" "" "RE3093X" "HMR_3514" "" "" "" "" "RCR12604" "RE3093X" "HMR_3514" "" "" "" 0 "MAR03515" "" "RE3090X" "HMR_3515" "" "" "" "" "RCR12605" "RE3090X" "HMR_3515" "" "" "" 0 -"MAR03517" "" "RT0781" "HMR_3517" "" "" "" "" "RCR20504" "" "HMR_3517" "" "" "" 0 -"MAR03301" "" "RE1516X" "HMR_3301" "" "" "" "" "RCR12606" "" "HMR_3301" "" "" "" 0 +"MAR03517" "SCP22x" "RT0781" "HMR_3517" "" "" "MNXR104294" "" "RCR20504" "SCP22x" "HMR_3517;SCP22x;MAR01709" "" "" "" 0 "MAR03302" "" "RE1523X" "HMR_3302" "" "" "" "" "RCR12607" "RE1523X" "HMR_3302" "" "" "" 0 "MAR03304" "" "RE0512X" "HMR_3304" "" "" "" "" "RCR12608" "RE0512X" "HMR_3304" "" "" "" 0 "MAR03305" "" "RE1531X" "HMR_3305" "" "" "" "" "RCR12609" "RE1531X" "HMR_3305" "" "" "" 0 -"MAR03306" "" "RE1517X" "HMR_3306" "" "" "" "" "RCR12610" "" "HMR_3306" "" "" "" 0 "MAR03307" "" "RE1522X" "HMR_3307" "" "" "" "" "RCR12611" "RE1522X" "HMR_3307" "" "" "" 0 "MAR03309" "" "RE1525X" "HMR_3309" "" "" "" "" "RCR12612" "RE1525X" "HMR_3309" "" "" "" 0 "MAR03310" "" "RE1532X" "HMR_3310" "" "" "" "" "RCR12613" "RE1532X" "HMR_3310" "" "" "" 0 -"MAR03311" "" "RE1518X" "HMR_3311" "" "" "" "" "RCR14519" "" "HMR_3311" "" "" "" 0 "MAR03312" "" "RE1521X" "HMR_3312" "" "" "" "" "RCR14520" "RE1521X" "HMR_3312" "" "" "" 0 "MAR03314" "" "RE1526X" "HMR_3314" "" "" "" "" "RCR12614" "RE1526X" "HMR_3314" "" "" "" 0 "MAR03315" "" "RE1533X" "HMR_3315" "" "" "" "" "RCR12615" "RE1533X" "HMR_3315" "" "" "" 0 @@ -2379,27 +2361,27 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR03116" "" "" "HMR_3116" "" "R07760" "" "" "RCR12630" "HMR_3116" "HMR_3116" "RHEA:35349" "RHEA:35347" "" 0 "MAR03117" "" "" "HMR_3117" "" "" "" "" "RCR12631" "HMR_3117" "HMR_3117" "RHEA:35276" "RHEA:35275" "" 0 "MAR03118" "" "" "HMR_3118" "" "" "" "" "RCR12632" "HMR_3118" "HMR_3118" "" "" "" 0 -"MAR03121" "" "" "HMR_3121" "" "R01279" "MNXR125070" "R-HSA-77299" "RCR12633" "HMR_3121" "HMR_3121" "" "RHEA:30747" "" 0 +"MAR03121" "r0310" "" "HMR_3121" "" "R01279" "MNXR125070" "R-HSA-77299" "RCR12633" "HMR_3121;r0310" "HMR_3121;r0310;MAR02035" "" "RHEA:30747" "" 0 "MAR03122" "" "R04738X" "HMR_3122" "r0716" "R04738" "MNXR105372;MNXR97892" "" "RCR12634" "r0716" "HMR_3122" "" "RHEA:31163" "" 0 "MAR03123" "" "R04737X" "HMR_3123" "r0714" "R04737" "MNXR100548;MNXR105371" "" "RCR12635" "r0714" "HMR_3123" "" "RHEA:31159" "" 0 "MAR03125" "" "R03991X" "HMR_3125" "r0653" "R03991" "MNXR95203" "" "RCR12636" "r0653" "HMR_3125" "" "RHEA:18161" "" 0 -"MAR03128" "" "" "HMR_3128" "" "R03990" "MNXR95300" "R-HSA-77274" "RCR12637" "HMR_3128" "HMR_3128" "" "RHEA:28358" "" 0 +"MAR03128" "r1449" "" "HMR_3128" "" "R03990" "MNXR95300" "R-HSA-77274" "RCR12637" "HMR_3128;r1449" "HMR_3128;r1449;MAR02370" "" "RHEA:28358" "" 0 "MAR03129" "" "R04740X" "HMR_3129" "r0720" "R04740" "MNXR105373;MNXR97891" "" "RCR12638" "r0720" "HMR_3129" "" "RHEA:31171" "" 0 "MAR03130" "" "R04739X" "HMR_3130" "r0718" "R04739" "MNXR100547" "" "RCR12639" "r0718" "HMR_3130" "" "RHEA:31167" "" 0 "MAR03132" "" "R03858X" "HMR_3132" "r0639" "R03858" "MNXR95201" "" "RCR12640" "r0639" "HMR_3132" "" "RHEA:31091" "" 0 -"MAR03135" "" "" "HMR_3135" "" "R03857" "MNXR95299" "R-HSA-77263" "RCR12641" "HMR_3135" "HMR_3135" "" "RHEA:31039" "" 0 -"MAR03136" "" "R04170X" "HMR_3136" "r0660" "R04170" "MNXR97890" "" "RCR12642" "r0660" "HMR_3136" "" "RHEA:31075" "" 0 +"MAR03135" "r1447" "" "HMR_3135" "" "R03857" "MNXR95299" "R-HSA-77263" "RCR12641" "HMR_3135;r1447" "HMR_3135;r1447;MAR02367" "" "RHEA:31039" "" 0 +"MAR03136" "r1446" "R04170X" "HMR_3136" "r0660" "R04170" "MNXR97890" "" "RCR12642" "r0660;r1446" "HMR_3136;r1446;MAR02366" "" "RHEA:31075" "" 0 "MAR03137" "" "R04741X" "HMR_3137" "r0722" "R04741" "MNXR100546" "" "RCR12643" "r0722" "HMR_3137" "" "RHEA:31179" "" 0 "MAR03139" "" "R04742X" "HMR_3139" "r0724" "R04742" "MNXR95199;MNXR95200" "" "RCR12644" "r0724" "HMR_3139" "RHEA:31185" "RHEA:31183" "" 0 -"MAR03142" "" "" "HMR_3142" "" "R04754" "MNXR109095" "R-HSA-77345" "RCR12645" "HMR_3142" "HMR_3142" "" "RHEA:28354" "" 0 +"MAR03142" "r1451" "" "HMR_3142" "" "R04754" "MNXR109095" "R-HSA-77345" "RCR12645" "HMR_3142;r1451" "HMR_3142;r1451;MAR02373" "" "RHEA:28354" "" 0 "MAR03143" "" "R04744X" "HMR_3143" "r0728" "R04744" "MNXR97889" "" "RCR12646" "r0728" "HMR_3143" "" "RHEA:31191" "" 0 "MAR03144" "" "R04743X" "HMR_3144" "r0726" "R04743" "MNXR100545" "" "RCR12647" "r0726" "HMR_3144" "" "RHEA:31187" "" 0 "MAR03146" "" "R03778X" "HMR_3146" "r0634" "R03778" "MNXR95198" "" "RCR12648" "r0634" "HMR_3146" "RHEA:31089" "RHEA:31087" "" 0 -"MAR03149" "" "" "HMR_3149" "" "R03777" "MNXR95304" "R-HSA-77338" "RCR12649" "HMR_3149" "HMR_3149" "" "RHEA:30943" "" 0 +"MAR03149" "r1448" "" "HMR_3149" "" "R03777" "MNXR95304" "R-HSA-77338" "RCR12649" "HMR_3149;r1448" "HMR_3149;r1448;MAR02369" "" "RHEA:30943" "" 0 "MAR03150" "" "R04746M" "HMR_3150" "r0731" "R04746" "MNXR97888" "" "RCR12650" "r0731" "HMR_3150" "" "RHEA:31199" "" 0 "MAR03151" "" "R04745M" "HMR_3151" "r0730" "R04745" "MNXR100544" "" "RCR12651" "r0730" "HMR_3151" "" "RHEA:31195" "" 0 "MAR03153" "" "R04747M" "HMR_3153" "r0732" "R04747" "MNXR109092" "" "RCR12652" "r0732" "HMR_3153" "RHEA:31205" "RHEA:31203" "" 0 -"MAR03156" "" "" "HMR_3156" "" "R04751" "MNXR109093" "R-HSA-77327" "RCR12653" "HMR_3156" "HMR_3156" "" "RHEA:31207" "" 0 +"MAR03156" "r1450" "" "HMR_3156" "" "R04751" "MNXR109093" "R-HSA-77327" "RCR12653" "HMR_3156;r1450" "HMR_3156;r1450;MAR02372" "" "RHEA:31207" "" 0 "MAR03157" "" "R04749M" "HMR_3157" "r0734" "R04749" "MNXR97886" "" "RCR12654" "r0734" "HMR_3157" "" "RHEA:30547" "" 0 "MAR03158" "" "R04748M" "HMR_3158" "r0733" "R04748" "MNXR100543" "R-HSA-77323" "RCR12655" "r0733" "HMR_3158" "" "RHEA:31143" "" 0 "MAR03160" "" "R01177M" "HMR_3160" "r0287" "R01177" "MNXR95196" "R-HSA-77321" "RCR12656" "r0287" "HMR_3160" "" "RHEA:31111" "" 0 @@ -2579,8 +2561,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR07167" "" "" "HMR_7167" "" "R09845" "MNXR113246" "" "RCR12825" "HMR_7167" "HMR_7167" "" "" "" 0 "MAR07168" "" "" "HMR_7168" "" "R04496" "MNXR108926" "" "RCR12826" "HMR_7168" "HMR_7168" "" "RHEA:21672" "" 0 "MAR07169" "" "" "HMR_7169" "" "R09847" "MNXR113248" "" "RCR12827" "HMR_7169" "HMR_7169" "" "" "" 0 -"MAR01644" "" "RE3248M" "HMR_1644" "" "R04813" "" "" "RCR12830" "HMR_1644" "HMR_1644" "" "RHEA:18933" "" 0 -"MAR01651" "" "RE3250M" "HMR_1651" "" "R04812" "" "" "RCR12831" "HMR_1651" "HMR_1651" "" "" "" 0 "MAR01920" "" "RE1100C" "HMR_1920" "" "R08941" "MNXR104607;MNXR112432" "" "RCR10697" "RE1100C" "HMR_1920" "" "" "" 0 "MAR01924" "" "" "HMR_1924" "" "" "" "R-HSA-196126" "RCR12832" "" "HMR_1924" "" "" "" 0 "MAR01926" "" "" "HMR_1926" "" "" "" "R-HSA-196086" "RCR12833" "" "HMR_1926" "" "" "" 0 @@ -3047,8 +3027,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR00478" "" "" "HMR_0478" "" "R00844" "MNXR99876" "R-HSA-75889" "RCR14575" "HMR_0478" "HMR_0478" "RHEA:11098" "RHEA:11096" "" 0 "MAR00479" "G3PD1" "R00842C" "HMR_0479" "r0201" "R00842" "MNXR99876" "" "RCR14576" "G3PD1" "HMR_0479" "" "RHEA:11092" "" 0 "MAR00481" "" "R00842C" "HMR_0481" "r0202" "R00842" "MNXR99876" "" "RCR14577" "r0202" "HMR_0481" "" "RHEA:11092" "" 0 -"MAR00483" "" "" "HMR_0483" "r0205" "R00849" "MNXR106713" "" "RCR21050" "r0205" "HMR_0483" "" "RHEA:18977" "" 0 -"MAR00482" "G3PD2m" "R00848C" "HMR_0482" "" "R00848" "MNXR99875" "" "RCR14578" "HMR_0482" "HMR_0482" "" "RHEA:31283" "" 0 +"MAR00482" "G3PD2m" "R00848C" "HMR_0482;HMR_0483" "r0205" "R00848;R00849" "MNXR99875;MNXR106713" "" "RCR14578;RCR21050" "HMR_0482;r0205" "HMR_0482;HMR_0483" "" "RHEA:31283;RHEA:18977" "" 0 "MAR00579" "" "" "HMR_0579" "r1307" "R00851" "" "" "RCR13155" "HMR_0579" "HMR_0579" "" "RHEA:15325" "" 0 "MAR00580" "" "" "HMR_0580" "r1308" "R02241" "" "" "RCR13156" "HMR_0580" "HMR_0580" "" "RHEA:19709" "" 0 "MAR00581" "" "" "HMR_0581" "r1309" "" "" "" "RCR10854" "HMR_0581" "HMR_0581" "" "" "" 0 @@ -3287,13 +3266,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR07610" "" "" "HMR_7610" "" "R04321" "MNXR108810" "" "RCR14616" "HMR_7610" "HMR_7610" "" "RHEA:36183" "" 0 "MAR07614" "" "" "HMR_7614" "" "R03438" "MNXR108170" "" "RCR10262" "HMR_7614" "HMR_7614" "" "RHEA:23992" "" 0 "MAR07615" "" "" "HMR_7615" "" "R07387" "MNXR111044" "" "RCR13366" "HMR_7615" "HMR_7615" "" "RHEA:36231" "" 0 -"MAR00024" "" "" "HMR_0024" "" "" "" "" "RCR13367" "HMR_0024" "HMR_0024" "" "" "" 0 -"MAR00025" "" "" "HMR_0025" "" "" "" "" "RCR20226" "HMR_0025" "HMR_0025" "" "" "" 0 -"MAR00026" "" "" "HMR_0026" "" "" "" "" "RCR21051" "HMR_0026" "HMR_0026" "" "" "" 0 -"MAR00027" "" "" "HMR_0027" "" "" "" "" "RCR21052" "HMR_0027" "HMR_0027" "" "" "" 0 -"MAR00028" "" "" "HMR_0028" "" "" "" "" "RCR21053" "HMR_0028" "HMR_0028" "" "" "" 0 -"MAR00029" "" "" "HMR_0029" "" "" "" "" "RCR40953" "HMR_0029" "HMR_0029" "" "" "" 0 -"MAR00030" "" "" "HMR_0030" "" "" "" "" "RCR20227" "HMR_0030" "HMR_0030" "" "" "" 0 "MAR07200" "XYLTer" "" "HMR_7200" "" "R05925" "MNXR105263;MNXR109949" "" "RCR13368" "XYLTer" "HMR_7200" "" "RHEA:50192" "" 0 "MAR07202" "GALTg" "" "HMR_7202" "" "R05926" "MNXR100017;MNXR109950" "" "RCR14617" "GALTg" "HMR_7202" "" "RHEA:15297" "" 0 "MAR07203" "GALT2g" "" "HMR_7203" "" "R05927" "MNXR100016" "" "RCR13369" "GALT2g" "HMR_7203" "" "RHEA:11780" "" 0 @@ -3498,19 +3470,13 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR01622" "" "" "HMR_1622" "r2517" "" "MNXR106326" "" "RCR20231" "r2517" "HMR_1622" "" "" "" 0 "MAR01623" "HMR_1623" "" "HMR_1623" "" "" "" "" "RCR20232" "HMR_1623" "HMR_1623" "" "" "" 0 "MAR01632" "" "RE2624X" "HMR_1632" "" "R08734" "MNXR112240" "R-HSA-192056" "RCR10915" "AMACRp;RE2624X" "HMR_1632" "RHEA:40456" "RHEA:40455" "" 0 -"MAR01635" "" "RE2624M" "HMR_1635" "" "R08734" "MNXR112240" "R-HSA-192056" "RCR13606" "HMR_1635;RE2624M" "HMR_1635" "RHEA:40456" "RHEA:40455" "" 0 -"MAR01637" "" "RE3247M" "HMR_1637" "r0706" "" "MNXR105369;MNXR124225" "R-HSA-192335" "RCR13607" "HMR_1637;RE3247M" "HMR_1637" "" "" "" 0 -"MAR01638" "ACOX2x" "" "HMR_1638" "" "" "" "" "RCR10916" "ACOX2x" "HMR_1638" "" "" "" 0 -"MAR01639" "" "RE3247X" "HMR_1639" "r0706" "" "MNXR105369;MNXR124225" "R-HSA-192335" "RCR10917" "RE3247X;r0706" "HMR_1639" "" "" "" 0 +"MAR01638" "ACOX2x" "RE3247X" "HMR_1638;HMR_1639" "r0706" "" "MNXR105369;MNXR124225" "R-HSA-192335" "RCR10916;RCR10917" "ACOX2x;RE3247X;r0706" "HMR_1638;HMR_1639;MAR01639" "" "" "" 0 "MAR01642" "" "" "HMR_1642" "r0744" "R04813" "MNXR105377;MNXR109137;MNXR115598" "R-HSA-192331" "RCR10918" "r0744" "HMR_1642" "" "RHEA:18933" "" 0 "MAR01646" "" "" "HMR_1646" "r0743" "R04812" "MNXR105376;MNXR109136" "" "RCR13608" "r0743" "HMR_1646" "" "" "" 0 "MAR01652" "SCPx" "R03719X" "HMR_1652" "r0628" "R03719" "MNXR104297;MNXR108369" "" "RCR13609" "SCPx" "HMR_1652" "" "RHEA:16865" "" 0 -"MAR01653" "SCPx" "R03719X" "HMR_1653" "r0628" "R03719" "MNXR104297;MNXR108369" "" "RCR13610" "HMR_1653" "HMR_1653" "" "RHEA:16865" "" 0 -"MAR01656" "" "" "HMR_1656" "r0990" "" "MNXR105412" "" "RCR20134" "r0990" "HMR_1656" "" "" "" 0 "MAR01659" "" "" "HMR_1659" "r2501" "" "MNXR106313" "" "RCR20234" "r2501" "HMR_1659" "" "" "3.A.1.203.3" 0 "MAR01660" "" "RE1834C" "HMR_1660" "r0794" "R07296" "MNXR103558;MNXR110971" "" "RCR10217" "RE1834C" "HMR_1660" "RHEA:14542" "RHEA:14541" "" 0 -"MAR01662" "" "RE1834M" "HMR_1662" "" "R07296" "MNXR103558;MNXR110971" "" "RCR13611" "RE1834M" "HMR_1662" "RHEA:14542" "RHEA:14541" "" 0 -"MAR01663" "" "RE1834X" "HMR_1663" "" "R07296" "MNXR103558;MNXR110971" "" "RCR13612" "RE1834X" "HMR_1663" "RHEA:14542" "RHEA:14541" "" 0 +"MAR01663" "" "RE1834X;RE1834M" "HMR_1663;HMR_1662" "" "R07296" "MNXR103558;MNXR110971" "" "RCR13612;RCR13611" "RE1834X;RE1834M" "HMR_1663;HMR_1662;MAR01662" "RHEA:14542" "RHEA:14541" "" 0 "MAR01667" "BAAT2x" "R03720C" "HMR_1667" "r0631" "R03720" "MNXR108370;MNXR96203" "" "RCR10919" "BAAT2x" "HMR_1667" "" "" "" 0 "MAR01668" "" "R03720C" "HMR_1668" "r0630" "R03720" "MNXR108370;MNXR96203" "" "RCR13613" "r0630" "HMR_1668" "" "" "" 0 "MAR01670" "" "" "HMR_1670" "r0629" "R03718" "MNXR108368;MNXR96202" "" "RCR10218" "r0629" "HMR_1670" "" "RHEA:14001" "" 0 @@ -3544,7 +3510,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR01722" "" "" "HMR_1722" "r0797" "R08744" "MNXR96206" "" "RCR10263" "r0797" "HMR_1722" "" "RHEA:49788" "" 0 "MAR01723" "" "" "HMR_1723" "r0798" "R08745" "" "" "RCR13632" "RE1845C" "HMR_1723" "" "RHEA:49784" "" 0 "MAR01725" "" "" "HMR_1725" "r1018" "" "MNXR105425" "" "RCR20519" "r1018" "HMR_1725" "" "" "" 0 -"MAR01729" "" "" "HMR_1729" "" "" "" "" "RCR10395" "" "HMR_1729" "" "" "" 0 +"MAR01729" "HC02220c" "" "HMR_1729" "" "" "" "" "RCR10395" "HC02220c" "HC02220c;HMR_1729;MAR10447" "" "" "" 0 "MAR01730" "" "" "HMR_1730" "" "" "" "" "RCR10396" "HMR_1730" "HMR_1730" "" "" "" 0 "MAR01740" "" "" "HMR_1740" "" "" "MNXR124230" "R-HSA-193755" "RCR13638" "HMR_1740" "HMR_1740" "" "" "" 0 "MAR01741" "" "" "HMR_1741" "" "" "MNXR124229" "R-HSA-193746" "RCR13639" "HMR_1741" "HMR_1741" "" "" "" 0 @@ -3619,8 +3585,8 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR08759" "HYPTROX" "" "HMR_8759" "" "" "MNXR100764" "" "RCR14644" "HYPTROX" "HMR_8759" "" "" "" 0 "MAR01847" "" "" "HMR_1847" "" "" "" "" "RCR14645" "HMR_1847" "HMR_1847" "" "" "" 0 "MAR01850" "" "" "HMR_1850" "r0970" "" "MNXR105409" "" "RCR20238" "r0970" "HMR_1850" "" "" "" 0 -"MAR01853" "" "" "HMR_1853" "r0993" "" "MNXR105414" "" "RCR40170" "" "HMR_1853" "" "" "3.A.1.208.2" 0 -"MAR01854" "" "" "HMR_1854" "r0994" "" "MNXR105415" "" "RCR20528" "" "HMR_1854" "" "" "" 0 +"MAR01853" "r0993" "" "HMR_1853" "r0993" "" "MNXR105414" "" "RCR40170" "r0993" "HMR_1853;r0993;MAR02276" "" "" "3.A.1.208.2" 0 +"MAR01854" "r0994" "" "HMR_1854" "r0994" "" "MNXR105415" "" "RCR20528" "r0994" "HMR_1854;r0994;MAR02277" "" "" "" 0 "MAR01857" "" "" "HMR_1857" "r1017" "" "MNXR104744" "" "RCR40318" "" "HMR_1857" "" "" "" 0 "MAR01859" "" "" "HMR_1859" "r1027" "" "MNXR105430" "" "RCR40172" "r1027" "HMR_1859" "" "" "" 0 "MAR01861" "" "" "HMR_1861" "r1029" "" "MNXR105431" "" "RCR40147" "" "HMR_1861" "" "" "" 0 @@ -3639,9 +3605,9 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR01883" "" "" "HMR_1883" "r2154" "" "MNXR106051" "" "RCR40331" "r2154" "HMR_1883" "" "" "2.A.60.1.14" 0 "MAR01884" "" "" "HMR_1884" "r2155" "" "MNXR106052" "" "RCR40332" "r2155" "HMR_1884" "" "" "2.A.60.1.14" 0 "MAR01885" "" "" "HMR_1885" "r2156" "" "MNXR106053" "" "RCR40333" "r2156" "HMR_1885" "" "" "2.A.60.1.14" 0 -"MAR01886" "" "" "HMR_1886" "r2157" "" "MNXR106054" "" "RCR40334" "" "HMR_1886" "" "" "2.A.60.1.14" 0 -"MAR01887" "" "" "HMR_1887" "r2158" "" "MNXR106055" "" "RCR40335" "" "HMR_1887" "" "" "2.A.60.1.14" 0 -"MAR01888" "" "" "HMR_1888" "r2159" "" "MNXR106056" "" "RCR40336" "" "HMR_1888" "" "" "2.A.60.1.14" 0 +"MAR01886" "r2157" "" "HMR_1886" "r2157" "" "MNXR106054" "" "RCR40334" "r2157" "HMR_1886;r2157;MAR02390" "" "" "2.A.60.1.14" 0 +"MAR01887" "r2158" "" "HMR_1887" "r2158" "" "MNXR106055" "" "RCR40335" "r2158" "HMR_1887;r2158;MAR02392" "" "" "2.A.60.1.14" 0 +"MAR01888" "r2159" "" "HMR_1888" "r2159" "" "MNXR106056" "" "RCR40336" "r2159" "HMR_1888;r2159;MAR02394" "" "" "2.A.60.1.14" 0 "MAR01889" "" "" "HMR_1889" "r2160" "" "MNXR106057" "" "RCR40337" "r2160" "HMR_1889" "" "" "2.A.60.1.14" 0 "MAR01890" "" "" "HMR_1890" "r2161" "" "MNXR106058" "" "RCR40338" "r2161" "HMR_1890" "" "" "2.A.60.1.14" 0 "MAR01891" "" "" "HMR_1891" "r2162" "" "MNXR106059" "" "RCR40339" "r2162" "HMR_1891" "" "" "2.A.60.1.14" 0 @@ -3882,8 +3848,8 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR07669" "APOCF" "" "HMR_7669" "" "" "MNXR95887" "" "RCR13841" "APOCF" "HMR_7669" "" "" "" 0 "MAR07670" "BTNPL" "" "HMR_7670" "" "R05145" "MNXR109352;MNXR96332" "" "RCR13842" "BTNPL" "HMR_7670" "" "RHEA:59732" "" 0 "MAR07671" "APOC_LYS_BTNP" "" "HMR_7671" "" "R04869" "MNXR109178" "" "RCR13843" "APOC_LYS_BTNP" "HMR_7671" "" "" "" 0 -"MAR07672" "" "" "HMR_7672" "" "R04385" "MNXR96330" "" "RCR13844" "" "HMR_7672" "" "RHEA:13501" "" 0 -"MAR07673" "" "" "HMR_7673" "" "R04386" "MNXR95220" "" "RCR13845" "" "HMR_7673" "" "RHEA:54728" "" 0 +"MAR07672" "" "" "HMR_7672" "" "R04385" "MNXR96330" "" "RCR13844" "" "HMR_7672;MAR04156" "" "RHEA:13501" "" 0 +"MAR07673" "" "" "HMR_7673" "" "R04386" "MNXR95220" "" "RCR13845" "" "HMR_7673;MAR01456" "" "RHEA:54728" "" 0 "MAR04160" "GTPCI" "R00424C" "HMR_4160" "r0117" "R00424" "MNXR100453" "" "RCR13846" "GTPCI" "HMR_4160" "" "RHEA:17473" "" 0 "MAR04162" "GTPCIn" "R00424C" "HMR_4162" "r0118" "R00424" "MNXR100453" "" "RCR14687" "GTPCIn" "HMR_4162" "" "RHEA:17473" "" 0 "MAR04163" "PTHPS" "R04286C" "HMR_4163" "r0674" "R04286" "MNXR103331" "" "RCR10975" "PTHPS" "HMR_4163" "" "RHEA:22048" "" 0 @@ -3929,7 +3895,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR06395" "FE3R2e" "" "HMR_6395" "" "" "MNXR99523" "" "RCR30520" "FE3R2e" "HMR_6395" "" "" "" 0 "MAR09717" "" "" "HMR_9717" "" "R03684" "MNXR108338" "" "RCR14697" "HMR_9717" "HMR_9717" "" "" "" 0 "MAR06630" "" "" "HMR_6630" "" "R08379" "MNXR103440" "" "RCR13881" "RDH1a" "HMR_6630" "" "RHEA:25033" "" 0 -"MAR06631" "" "" "HMR_6631" "" "R02124" "MNXR103439" "" "RCR10422" "RDH1" "HMR_6631" "" "RHEA:21284" "" 0 +"MAR06631" "HMR_6633;RDH1;R_HMR_6633;R_RDH1;R_TRETINOLOR1;TRETINOLOR1" "" "HMR_6631" "" "R02124" "MNXR103439;MNXR189842" "" "RCR10422" "RDH1" "HMR_6631;MAR20002" "" "RHEA:21284" "" 0 "MAR06632" "" "" "HMR_6632" "" "R08379" "MNXR103440" "" "RCR13882" "HMR_6632" "HMR_6632" "" "RHEA:25033" "" 0 "MAR06633" "" "" "HMR_6633" "" "R02124" "MNXR103439" "" "RCR14698" "HMR_6633" "HMR_6633" "" "RHEA:21284" "" 0 "MAR06635" "" "" "HMR_6635" "" "R08387" "MNXR111932" "" "RCR10984" "HMR_6635" "HMR_6635" "" "" "" 0 @@ -4206,7 +4172,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR06536" "" "RE2514C" "HMR_6536" "" "" "MNXR103688" "" "RCR14123" "RE2514C" "HMR_6536" "" "" "" 0 "MAR09569" "" "R03024C" "HMR_9569" "r0587" "R03024" "MNXR105353;MNXR107896" "" "RCR30521" "r0587" "HMR_9569" "" "RHEA:21664" "" 0 "MAR03955" "HCO3E" "" "HMR_3955" "" "R10092" "MNXR100482" "" "RCR10229" "H2CO3D" "HMR_3955" "RHEA:10750" "RHEA:10748" "" 0 -"MAR03984" "CATp" "" "HMR_3984" "r0012" "R00009" "MNXR96455" "" "RCR11007" "CATp" "HMR_3984" "RHEA:20310" "RHEA:20309" "" 0 +"MAR03984" "CAT;CATm;CATp;CATpp;CATr;R_CAT;R_CATm;R_CATp;R_CATpp;R_CATr" "" "HMR_3984" "r0012" "R00009" "MNXR96455" "" "RCR11007" "CATp" "HMR_3984;MAR20066" "RHEA:20310" "RHEA:20309" "" 0 "MAR04201" "PRDX" "R00602C" "HMR_4201" "r0162" "R00602" "MNXR103159" "" "RCR14124" "PRDX" "HMR_4201" "RHEA:30692" "RHEA:30691" "" 0 "MAR04202" "ALCD1" "" "HMR_4202" "" "R00605" "MNXR95708" "" "RCR14125" "ALCD1" "HMR_4202" "RHEA:19402" "RHEA:19401" "" 0 "MAR05127" "" "" "HMR_5127" "r1085" "" "" "" "RCR14752" "" "HMR_5127" "" "" "" 1 @@ -4464,7 +4430,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR00400" "LNLNCGt" "" "HMR_0400" "r1297" "" "MNXR101114" "" "RCR40406" "LNLNCGt" "HMR_0400" "" "" "4.C.1.1.5;4.C.1.1.8" 0 "MAR00403" "" "" "HMR_0403" "r1520" "" "MNXR105492" "" "RCR40407" "r1520" "HMR_0403" "" "" "3.A.1.211.1" 0 "MAR00404" "DLNLCGt" "" "HMR_0404" "r1366" "" "" "" "RCR40408" "DLNLCGt" "HMR_0404" "" "" "4.C.1.1.5;4.C.1.1.8" 0 -"MAR00407" "" "" "HMR_0407" "r1525" "" "MNXR105496" "" "RCR40409" "r1525" "HMR_0407" "" "" "3.A.1.211.1" 0 +"MAR00407" "" "" "HMR_0407" "r1525" "" "MNXR105496" "" "RCR40409" "CE2516t;r1525" "CE2516t;HMR_0407;MAR10164" "" "" "3.A.1.211.1" 0 "MAR00408" "ARACHDt2" "" "HMR_0408" "r0930" "" "MNXR95918" "" "RCR40043" "ARACHDt2" "HMR_0408" "" "" "4.C.1.1.5;4.C.1.1.8" 0 "MAR00411" "" "" "HMR_0411" "r1514" "" "MNXR105486" "" "RCR40203" "r1514" "HMR_0411" "" "" "3.A.1.211.1" 0 "MAR00412" "ADRNt" "" "HMR_0412" "" "" "" "" "RCR40059" "ADRNt" "HMR_0412" "" "" "4.C.1.1.5;4.C.1.1.8" 0 @@ -4481,7 +4447,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR00435" "" "" "HMR_0435" "" "" "" "" "RCR40209" "HMR_0435" "HMR_0435" "" "" "3.A.1.211.1" 0 "MAR00436" "" "" "HMR_0436" "" "" "" "" "RCR40106" "HMR_0436" "HMR_0436" "" "" "4.C.1.1.5;4.C.1.1.8" 0 "MAR00439" "" "" "HMR_0439" "" "" "" "" "RCR40210" "HMR_0439" "HMR_0439" "" "" "3.A.1.211.1" 0 -"MAR00440" "" "" "HMR_0440" "" "" "" "" "RCR40410" "" "HMR_0440" "" "" "" 0 +"MAR00440" "PHYTt" "" "HMR_0440" "" "" "MNXR102660" "" "RCR40410" "PHYTt" "HMR_0440;PHYTt;;MAR01617" "" "" "" 0 "MAR00444" "GLYCt" "" "HMR_0444" "r0903" "" "MNXR100343" "" "RCR40411" "GLYCt;GLYCTDle" "HMR_0444" "RHEA:29678" "RHEA:29675" "" 0 "MAR00469" "" "" "HMR_0469" "r1509" "" "" "" "RCR40966" "HMR_0469" "HMR_0469" "" "" "3.A.1.201.3" 0 "MAR00470" "PCt" "" "HMR_0470" "r1511" "" "MNXR102419" "" "RCR40412" "HMR_0470" "HMR_0470" "" "" "3.A.1.201.3" 0 @@ -5324,9 +5290,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR06139" "" "" "HMR_6139" "r2233" "" "MNXR106130" "" "RCR40592" "r2233" "HMR_6139" "" "" "2.A.60.1.5" 0 "MAR06140" "" "" "HMR_6140" "r2234" "" "MNXR106131" "" "RCR40593" "r2234" "HMR_6140" "" "" "2.A.60.1.5" 0 "MAR06141" "" "" "HMR_6141" "r2235" "" "MNXR106132" "" "RCR40594" "r2235" "HMR_6141" "" "" "2.A.60.1.5" 0 -"MAR06142" "" "" "HMR_6142" "r2236" "" "MNXR106133" "" "RCR40595" "" "HMR_6142" "" "" "2.A.60.1.5" 0 -"MAR06143" "" "" "HMR_6143" "r2237" "" "MNXR106134" "" "RCR40596" "" "HMR_6143" "" "" "2.A.60.1.5" 0 -"MAR06144" "" "" "HMR_6144" "r2238" "" "MNXR106135" "" "RCR40597" "" "HMR_6144" "" "" "2.A.60.1.5" 0 "MAR06145" "" "" "HMR_6145" "r2239" "" "MNXR106136" "" "RCR40598" "r2239" "HMR_6145" "" "" "2.A.60.1.5" 0 "MAR06146" "" "" "HMR_6146" "r2240" "" "MNXR106137" "" "RCR40599" "r2240" "HMR_6146" "" "" "2.A.60.1.5" 0 "MAR06147" "" "" "HMR_6147" "r2241" "" "MNXR106138" "" "RCR40600" "r2241" "HMR_6147" "" "" "2.A.60.1.5" 0 @@ -5402,7 +5365,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR06217" "" "" "HMR_6217" "r2312" "" "MNXR106209" "" "RCR41502" "r2312" "HMR_6217" "" "" "2.A.60.1.14" 0 "MAR06218" "" "" "HMR_6218" "r2313" "" "MNXR106210" "" "RCR40670" "r2313" "HMR_6218" "" "" "2.A.60.1.2" 0 "MAR06219" "" "" "HMR_6219" "r2314" "" "MNXR106211" "" "RCR40671" "r2314" "HMR_6219" "" "" "2.A.60.1.2" 0 -"MAR06220" "" "" "HMR_6220" "r2315" "" "MNXR106212" "" "RCR40672" "" "HMR_6220" "" "" "2.A.60.1.2" 0 "MAR06221" "" "" "HMR_6221" "r2316" "" "MNXR106213" "" "RCR40673" "r2316" "HMR_6221" "" "" "2.A.60.1.2" 0 "MAR06222" "" "" "HMR_6222" "r2317" "" "MNXR106214" "" "RCR40674" "r2317" "HMR_6222" "" "" "2.A.60.1.2" 0 "MAR06223" "" "" "HMR_6223" "r2318" "" "MNXR106215" "" "RCR40675" "r2318" "HMR_6223" "" "" "2.A.60.1.2" 0 @@ -5434,7 +5396,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR06249" "" "" "HMR_6249" "r2343" "" "MNXR97397" "" "RCR40696" "r2343" "HMR_6249" "" "" "" 0 "MAR06250" "" "" "HMR_6250" "r2344" "" "MNXR96253" "" "RCR40055" "r2344" "HMR_6250" "" "" "" 0 "MAR06251" "" "" "HMR_6251" "r2345" "" "" "" "RCR40697" "LEUKTRD4t" "HMR_6251" "" "" "" 0 -"MAR06252" "" "" "HMR_6252" "r2346" "" "MNXR106235" "" "RCR40129" "" "HMR_6252" "" "" "" 0 "MAR06253" "" "" "HMR_6253" "r2347" "" "MNXR106236" "" "RCR40698" "r2347" "HMR_6253" "RHEA:50995" "RHEA:50992" "" 0 "MAR06254" "" "" "HMR_6254" "r2348" "" "" "" "RCR40699" "LEUKTRA4t" "HMR_6254" "" "" "" 0 "MAR06255" "" "" "HMR_6255" "r2349" "" "" "" "RCR40274" "LEUKTRB4t" "HMR_6255" "" "" "" 0 @@ -6072,7 +6033,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR07719" "Uritm" "" "HMR_7719" "" "" "MNXR105165" "" "RCR20632" "Uritm" "HMR_7719" "" "" "" 0 "MAR07723" "CYTDtm" "" "HMR_7723" "" "" "MNXR97043" "" "RCR20633" "CYTDtm" "HMR_7723" "" "" "" 0 "MAR07757" "" "RT0107" "HMR_7757" "" "" "" "" "RCR20634" "HMR_7757" "HMR_7757" "" "" "" 0 -"MAR07758" "" "RT0402" "HMR_7758" "" "" "" "" "RCR20277" "HMR_7758" "HMR_7758" "" "" "" 0 "MAR07769" "AMETt2m" "" "HMR_7769" "" "" "MNXR95811" "" "RCR20182" "AMETt2m" "HMR_7769" "" "" "" 0 "MAR07804" "DNDPt29m" "" "HMR_7804" "" "" "MNXR97628" "" "RCR20121" "DNDPt29m;DNDPt10m" "HMR_7804" "" "" "" 0 "MAR07806" "DNDPt35m" "" "HMR_7806" "" "" "MNXR97629" "" "RCR20183" "DNDPt35m;DNDPt11m" "HMR_7806" "" "" "" 0 @@ -6812,7 +6772,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR09034" "EX_glc__D_e" "" "HMR_9034" "" "" "" "" "RCR30315" "EX_glc_D[e]" "HMR_9034" "" "" "" 0 "MAR09035" "EX_lnlc_e" "" "HMR_9035" "" "" "" "" "RCR30183" "EX_lnlc[e]" "HMR_9035" "" "" "" 0 "MAR09036" "EX_lnlnca_e" "" "HMR_9036" "" "" "" "" "RCR30035" "EX_lnlnca[e]" "HMR_9036" "" "" "" 0 -"MAR09037" "" "" "HMR_9037" "" "" "" "" "RCR30316" "" "HMR_9037" "" "" "" 0 +"MAR09037" "EX_phyt_e" "" "HMR_9037" "" "" "MNXR98853" "" "RCR30316" "EX_phyt[e]" "EX_phyt[e];HMR_9037;MAR00659" "" "" "" 0 "MAR09038" "EX_his__L_e" "" "HMR_9038" "" "" "" "" "RCR30527" "EX_his_L[e]" "HMR_9038" "" "" "" 0 "MAR09039" "EX_ile__L_e" "" "HMR_9039" "" "" "" "" "RCR30528" "EX_ile_L[e]" "HMR_9039" "" "" "" 0 "MAR09040" "EX_leu__L_e" "" "HMR_9040" "" "" "" "" "RCR30529" "EX_leu_L[e]" "HMR_9040" "" "" "" 0 @@ -7242,7 +7202,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR09730" "" "" "HMR_9730" "" "" "" "" "RCR30245" "EX_HC00001[e]" "HMR_9730" "" "" "" 0 "MAR09725" "" "" "HMR_9725" "" "" "" "" "RCR21039" "HMR_9725" "HMR_9725" "" "" "" 0 "MAR00031" "" "" "HMR_0031" "" "" "" "" "RCR14835" "HMR_0031" "HMR_0031" "" "" "" 0 -"MAR00032" "" "" "HMR_0032" "" "" "" "" "RCR14836" "HMR_0032" "HMR_0032" "" "" "" 0 "MAR00021" "" "" "" "" "" "" "" "RCR21132" "biomass_components" "biomass_components" "" "" "" 0 "MAR00022" "" "" "" "" "" "" "" "RCR21040" "cofactors_vitamins" "cofactors_vitamins" "" "" "" 0 "MAR00023" "" "" "" "" "" "" "" "RCR21133" "vitaminA" "vitaminA" "" "" "" 0 @@ -7254,7 +7213,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR00038" "10FTHFtm" "" "" "" "" "MNXR94672" "" "" "10FTHFtm" "10FTHFtm" "" "" "" 0 "MAR00040" "34HPLFM" "" "" "" "" "MNXR94842" "" "" "34HPLFM" "34HPLFM" "" "" "" 0 "MAR00041" "3DPHBH1" "" "" "" "" "MNXR94864" "" "" "3DPHBH1" "3DPHBH1" "" "" "" 0 -"MAR00042" "3HBCOAHLm" "" "" "" "" "MNXR94891" "" "" "3HBCOAHLm" "3HBCOAHLm" "" "" "" 0 "MAR00043" "3HPCOAHYD" "" "" "" "" "MNXR94900" "" "" "3HPCOAHYD" "3HPCOAHYD" "" "" "" 0 "MAR00044" "3HPPD" "" "" "" "" "MNXR94902" "" "" "3HPPD" "3HPPD" "" "" "" 0 "MAR00045" "3MOBt2im" "" "" "" "" "MNXR94923" "" "" "3MOBt2im" "3MOBt2im" "" "" "" 0 @@ -7270,7 +7228,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR00056" "ACACtx" "" "" "" "" "MNXR95208" "" "" "ACACtx" "ACACtx" "RHEA:29754" "RHEA:29751" "" 0 "MAR00057" "ACCOAtr" "" "" "" "" "MNXR95223" "" "" "ACCOAtr" "ACCOAtr" "" "" "" 0 "MAR00058" "ACHVESSEC" "" "" "" "" "MNXR95266" "" "" "ACHVESSEC" "ACHVESSEC" "" "" "" 0 -"MAR00059" "ACOX22x" "" "" "" "" "MNXR95389" "" "" "ACOX22x" "ACOX22x" "" "" "" 0 "MAR00060" "ACRNtm" "" "" "" "" "MNXR95412" "" "" "ACRNtm" "ACRNtm" "" "" "" 0 "MAR00061" "ACt2m" "" "" "" "" "MNXR95429" "" "" "ACt2m" "ACt2m" "" "" "" 0 "MAR00062" "ADPRDPm" "" "" "" "" "MNXR95480" "" "" "ADPRDPm" "ADPRDPm" "" "" "" 0 @@ -7305,7 +7262,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR00093" "BTNt2m" "" "" "" "" "MNXR96334" "" "" "BTNt2m" "BTNt2m" "" "" "" 0 "MAR00094" "BTNt3i" "" "" "" "" "MNXR96336" "" "" "BTNt3i" "BTNt3i" "" "" "" 0 "MAR00095" "BTNt4i" "" "" "" "" "MNXR96337" "" "" "BTNt4i" "BTNt4i" "" "" "" 0 -"MAR00096" "BUP2" "" "" "" "" "MNXR96346" "" "" "BUP2" "BUP2" "" "" "" 0 "MAR00097" "BUTt2m" "" "" "" "" "MNXR96353" "" "" "BUTt2m" "BUTt2m" "" "" "" 0 "MAR00098" "BVITEt" "" "" "" "" "MNXR96355" "" "" "BVITEt" "BVITEt" "" "" "" 0 "MAR00099" "BZt" "" "" "" "" "MNXR96370" "" "" "BZt" "BZt" "RHEA:32814" "RHEA:32811" "" 0 @@ -7407,7 +7363,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR00573" "EX_crvnc_e" "" "" "" "" "MNXR98375" "" "" "EX_crvnc[e]" "EX_crvnc[e]" "" "" "" 0 "MAR00574" "EX_dag_hs_e" "" "" "" "" "MNXR98395" "" "" "EX_dag_hs[e]" "EX_dag_hs[e]" "" "" "" 0 "MAR00575" "EX_dcsptn1_e" "" "" "" "" "MNXR98401" "" "" "EX_dcsptn1[e]" "EX_dcsptn1[e]" "" "" "" 0 -"MAR00576" "EX_dlnlcg_e" "" "" "" "" "MNXR98420" "" "" "EX_dlnlcg[e]" "EX_dlnlcg[e]" "" "" "" 0 +"MAR00576" "EX_dlnlcg_e" "" "" "" "" "MNXR98420" "" "" "EX_CE2516[e];EX_dlnlcg[e]" "EX_CE2516[e];EX_dlnlcg[e];MAR10433" "" "" "" 0 "MAR00577" "EX_eicostet_e" "" "" "" "" "MNXR98442" "" "" "EX_eicostet[e]" "EX_eicostet[e]" "" "" "" 0 "MAR00583" "EX_elaid_e" "" "" "" "" "MNXR98443" "" "" "EX_elaid[e]" "EX_elaid[e]" "" "" "" 0 "MAR00585" "EX_fucfuc12gal14acglcgalgluside_hs_e" "" "" "" "" "MNXR98508" "" "" "EX_fucfuc12gal14acglcgalgluside_hs[e]" "EX_fucfuc12gal14acglcgalgluside_hs[e]" "" "" "" 0 @@ -7432,7 +7388,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR00655" "EX_pchol_hs_e" "" "" "" "" "MNXR98826" "" "" "EX_pchol_hs[e]" "EX_pchol_hs[e]" "" "" "" 0 "MAR00656" "EX_pe_hs_e" "" "" "" "" "MNXR98829" "" "" "EX_pe_hs[e]" "EX_pe_hs[e]" "" "" "" 0 "MAR00658" "EX_pglyc_hs_e" "" "" "" "" "MNXR98843" "" "" "EX_pglyc_hs[e]" "EX_pglyc_hs[e]" "" "" "" 0 -"MAR00659" "EX_phyt_e" "" "" "" "" "MNXR98853" "" "" "EX_phyt[e]" "EX_phyt[e]" "" "" "" 0 "MAR00661" "EX_ps_hs_e" "" "" "" "" "MNXR98877" "" "" "EX_ps_hs[e]" "EX_ps_hs[e]" "" "" "" 0 "MAR00662" "EX_ptdca_e" "" "" "" "" "MNXR98887" "" "" "EX_ptdca[e]" "EX_ptdca[e]" "" "" "" 0 "MAR00666" "EX_retfa_e" "" "" "" "" "MNXR98903" "" "" "EX_retfa[e]" "EX_retfa[e]" "" "" "" 0 @@ -7520,7 +7475,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR01083" "FUT18g" "" "" "" "" "MNXR99731" "" "" "FUT18g" "FUT18g" "" "" "" 0 "MAR01118" "FUT34g" "" "" "" "" "MNXR99739" "" "" "FUT34g" "FUT34g" "" "" "" 0 "MAR01141" "FUT93g" "" "" "" "" "MNXR99751" "" "" "FUT93g" "FUT93g" "" "" "" 0 -"MAR01169" "G3PD2m" "" "" "" "" "MNXR99878" "" "" "G3PD2m" "G3PD2m" "" "" "" 0 +"MAR01169" "G3PD2m" "" "HMR_0483" "r0205" "R00849" "MNXR99878;MNXR106713" "" "RCR21050" "G3PD2m;r0205" "G3PD2m;HMR_0483" "" "RHEA:18977" "" 0 "MAR01314" "GABAVESSEC" "" "" "" "" "MNXR99916" "" "" "GABAVESSEC" "GABAVESSEC" "" "" "" 0 "MAR01340" "GALFUCGALACGLCGAL14ACGLCGALGLUSIDEtg" "" "" "" "" "MNXR99968" "" "" "GALFUCGALACGLCGAL14ACGLCGALGLUSIDEtg" "GALFUCGALACGLCGAL14ACGLCGALGLUSIDEtg" "" "" "" 0 "MAR01348" "GALGLUSIDEtg" "" "" "" "" "MNXR99974" "" "" "GALGLUSIDEtg" "GALGLUSIDEtg" "" "" "" 0 @@ -7551,7 +7506,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR01453" "HPYRR2x" "" "" "" "" "MNXR100701" "" "" "HPYRR2x" "HPYRR2x" "" "" "" 0 "MAR01455" "HRETNtn" "" "" "" "" "MNXR100704" "" "" "HRETNtn" "HRETNtn" "" "" "" 0 "MAR01456" "HSD17B42x" "" "" "" "" "MNXR100718" "" "" "HSD17B42x" "HSD17B42x" "" "" "" 0 -"MAR01458" "HSD17B4x" "" "" "" "" "MNXR100720" "" "" "HSD17B4x" "HSD17B4x" "" "" "" 0 "MAR01461" "Htr" "" "" "" "" "MNXR100765" "" "" "Htr" "Htr" "RHEA:34982" "RHEA:34979" "" 0 "MAR01462" "Htx" "" "" "" "" "MNXR100765" "" "" "Htx" "Htx" "RHEA:34982" "RHEA:34979" "" 0 "MAR01463" "HXANtl" "" "" "" "" "MNXR100749" "" "" "HXANtl" "HXANtl" "" "" "" 0 @@ -7625,7 +7579,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR01612" "PGPP_hs" "" "" "" "" "MNXR102585" "" "" "PGPP_hs" "PGPP_hs" "" "" "" 0 "MAR01615" "PGPPT" "" "" "" "" "MNXR102578" "" "" "PGPPT" "PGPPT" "" "" "" 0 "MAR01616" "PHETA1m" "" "" "" "" "MNXR102631" "" "" "PHETA1m" "PHETA1m" "" "" "" 0 -"MAR01617" "PHYTt" "" "" "" "" "MNXR102660" "" "" "PHYTt" "PHYTt" "" "" "" 0 "MAR01618" "PI4P3Ker" "" "" "" "" "MNXR102746" "" "" "PI4P3Ker" "PI4P3Ker" "" "" "" 0 "MAR01621" "PIter" "" "" "" "" "MNXR102871" "" "" "PIter" "PIter" "RHEA:32826" "RHEA:32823" "" 0 "MAR01626" "PItx" "" "" "" "" "MNXR102871" "" "" "PItx" "PItx" "RHEA:32826" "RHEA:32823" "" 0 @@ -7658,7 +7611,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR01698" "RETFAt" "" "" "" "" "MNXR103996" "" "" "RETFAt" "RETFAt" "" "" "" 0 "MAR01705" "RETFAt1" "" "" "" "" "MNXR103997" "" "" "RETFAt1" "RETFAt1" "" "" "" 0 "MAR01707" "RIBt2" "" "" "" "" "MNXR104037" "" "" "RIBt2" "RIBt2" "" "" "" 0 -"MAR01709" "SCP22x" "" "" "" "" "MNXR104294" "" "" "SCP22x" "SCP22x" "" "" "" 0 "MAR01711" "SCP2x" "" "" "" "" "MNXR104295" "" "" "SCP2x" "SCP2x" "" "" "" 0 "MAR01712" "Ser_Thrtg" "" "" "" "" "MNXR104656" "" "" "Ser_Thrtg" "Ser_Thrtg" "" "" "" 0 "MAR01719" "STCOAtx" "" "" "" "" "MNXR104598" "" "" "STCOAtx" "STCOAtx" "" "" "" 0 @@ -7693,7 +7645,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR01820" "UGT1A10r" "" "" "" "" "MNXR96258" "" "" "UGT1A10r" "UGT1A10r" "" "" "" 0 "MAR01821" "VALt5m" "" "" "" "" "MNXR105190" "" "" "VALt5m" "VALt5m" "" "" "" 0 "MAR01822" "VITD3tm" "" "" "" "" "MNXR105203" "" "" "VITD3tm" "VITD3tm" "" "" "" 0 -"MAR01823" "VITD3tm3" "" "" "" "" "MNXR105203" "" "" "VITD3tm3" "VITD3tm3" "" "" "" 0 "MAR01824" "XOL27OHtm" "" "" "" "" "MNXR105232" "" "" "XOL27OHtm" "XOL27OHtm" "" "" "" 0 "MAR01825" "XOL7AH2tr" "" "" "" "" "MNXR105233" "" "" "XOL7AH2tr" "XOL7AH2tr" "" "" "" 0 "MAR01826" "XOLDIOLONEtm" "" "" "" "" "MNXR105235" "" "" "XOLDIOLONEtm" "XOLDIOLONEtm" "" "" "" 0 @@ -7730,9 +7681,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR01984" "EX_prpp_e" "" "" "" "" "MNXR98875" "" "" "EX_prpp[e]" "EX_prpp[e]" "" "" "" 0 "MAR01986" "EX_udpg_e" "" "" "" "" "MNXR99017" "" "" "EX_udpg[e]" "EX_udpg[e]" "" "" "" 0 "MAR02021" "r0093" "" "" "" "" "MNXR105070" "" "" "r0093" "r0093" "" "" "" 0 -"MAR02027" "r0193" "" "" "" "" "MNXR105313" "" "" "r0193" "r0193" "" "" "" 0 "MAR02028" "ACOAR7m" "" "" "" "" "MNXR95375" "" "" "r0309" "r0309" "" "" "" 0 -"MAR02035" "r0310" "" "" "" "" "" "" "" "r0310" "r0310" "" "" "" 0 "MAR02119" "r0403" "" "" "" "" "" "" "" "r0403" "r0403" "" "" "" 0 "MAR02120" "r0410" "" "" "" "" "MNXR102049" "" "" "r0410" "r0410" "RHEA:28365" "RHEA:28362" "" 0 "MAR02121" "r0437" "" "" "" "" "MNXR96384" "" "" "r0437" "r0437" "" "" "" 0 @@ -7744,7 +7693,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR02148" "r0633" "" "" "" "" "" "" "" "r0633" "r0633" "RHEA:44955" "RHEA:44952" "" 0 "MAR02149" "ACOAR5m" "" "" "" "" "MNXR95373" "" "" "r0638" "r0638" "" "" "" 0 "MAR02183" "r0652" "" "" "" "" "MNXR105364" "" "" "r0652" "r0652" "" "" "" 0 -"MAR02185" "" "" "" "" "" "" "" "" "r0701" "r0701" "" "" "" 0 "MAR02187" "ACOAR4m" "" "" "" "" "MNXR95372" "" "" "r0735" "r0735" "RHEA:44963" "RHEA:44960" "" 0 "MAR02188" "r0752" "" "" "" "" "MNXR94840" "" "" "r0752" "r0752" "" "" "" 0 "MAR02189" "r0753" "" "" "" "" "MNXR94841" "" "" "r0753" "r0753" "" "" "" 0 @@ -7765,8 +7713,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR02273" "r0986" "" "" "" "" "MNXR101107" "" "" "r0986" "r0986" "" "" "" 0 "MAR02274" "r0988" "" "" "" "" "MNXR101014" "" "" "r0988" "r0988" "" "" "" 0 "MAR02275" "r0989" "" "" "" "" "MNXR105412" "" "" "r0989" "r0989" "" "" "" 0 -"MAR02276" "r0993" "" "" "" "" "MNXR105414" "" "" "r0993" "r0993" "" "" "" 0 -"MAR02277" "r0994" "" "" "" "" "MNXR105415" "" "" "r0994" "r0994" "" "" "" 0 "MAR02278" "r0999" "" "" "" "" "MNXR105417" "" "" "r0999" "r0999" "" "" "" 0 "MAR02279" "r1003" "" "" "" "" "MNXR105419" "" "" "r1003" "r1003" "" "" "" 0 "MAR02280" "r1008" "" "" "" "" "MNXR105421" "" "" "r1008" "r1008" "" "" "" 0 @@ -7804,14 +7750,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR02351" "PIt" "" "" "" "" "MNXR102871" "" "" "r1423" "r1423" "RHEA:32824" "RHEA:32823" "" 0 "MAR02352" "" "" "" "" "" "" "" "" "r1431" "r1431" "" "" "" 0 "MAR02357" "" "" "" "" "" "" "" "" "r1432" "r1432" "" "" "" 0 -"MAR02358" "" "" "" "" "" "" "" "" "r1433" "r1433" "" "" "" 0 "MAR02360" "r1441" "" "" "" "" "MNXR104924" "" "" "r1441" "r1441" "" "" "" 0 -"MAR02366" "r1446" "" "" "" "" "" "" "" "r1446" "r1446" "" "" "" 0 -"MAR02367" "r1447" "" "" "" "" "" "" "" "r1447" "r1447" "" "" "" 0 -"MAR02369" "r1448" "" "" "" "" "" "" "" "r1448" "r1448" "" "" "" 0 -"MAR02370" "r1449" "" "" "" "" "" "" "" "r1449" "r1449" "" "" "" 0 -"MAR02372" "r1450" "" "" "" "" "" "" "" "r1450" "r1450" "" "" "" 0 -"MAR02373" "r1451" "" "" "" "" "" "" "" "r1451" "r1451" "" "" "" 0 "MAR02375" "r1466" "" "" "" "" "MNXR105476" "" "" "r1466" "r1466" "" "" "" 0 "MAR02377" "r1467" "" "" "" "" "MNXR102156" "" "" "r1467" "r1467" "" "" "" 0 "MAR02379" "r1468" "" "" "" "" "MNXR105477" "" "" "r1468" "r1468" "" "" "" 0 @@ -7819,14 +7758,11 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR02382" "GTHRDt2" "" "" "" "" "MNXR100449" "" "" "r1493" "r1493" "" "" "" 0 "MAR02385" "r1526" "" "" "" "" "MNXR105497" "" "" "r1526" "r1526" "" "" "" 0 "MAR02386" "r1527" "" "" "" "" "MNXR105498" "" "" "r1527" "r1527" "" "" "" 0 -"MAR02390" "r2157" "" "" "" "" "MNXR106054" "" "" "r2157" "r2157" "" "" "" 0 -"MAR02392" "r2158" "" "" "" "" "MNXR106055" "" "" "r2158" "r2158" "" "" "" 0 -"MAR02394" "r2159" "" "" "" "" "MNXR106056" "" "" "r2159" "r2159" "" "" "" 0 -"MAR02396" "r2236" "" "" "" "" "MNXR106133" "" "" "r2236" "r2236" "" "" "" 0 -"MAR02398" "r2237" "" "" "" "" "MNXR106134" "" "" "r2237" "r2237" "" "" "" 0 -"MAR02400" "r2238" "" "" "" "" "MNXR106135" "" "" "r2238" "r2238" "" "" "" 0 -"MAR02402" "r2315" "" "" "" "" "MNXR106212" "" "" "r2315" "r2315" "" "" "" 0 -"MAR02404" "r2346" "" "" "" "" "MNXR106235" "" "" "r2346" "r2346" "" "" "" 0 +"MAR02396" "r2236" "" "HMR_6142" "r2236" "" "MNXR106133" "" "RCR40595" "r2236" "HMR_6142;r2236;MAR06142" "" "" "2.A.60.1.5" 0 +"MAR02398" "r2237" "" "HMR_6143" "r2237" "" "MNXR106134" "" "RCR40596" "r2237" "HMR_6143;r2237;MAR06143" "" "" "2.A.60.1.5" 0 +"MAR02400" "r2238" "" "HMR_6144" "r2238" "" "MNXR106135" "" "RCR40597" "r2238" "HMR_6144;r2238;MAR06144" "" "" "2.A.60.1.5" 0 +"MAR02402" "r2315" "" "HMR_6220" "r2315" "" "MNXR106212" "" "RCR40672" "r2315" "HMR_6220;r2315;MAR06220" "" "" "2.A.60.1.2" 0 +"MAR02404" "r2346" "" "HMR_6252" "r2346" "" "MNXR106235" "" "RCR40129" "r2346" "HMR_6252;r2346;MAR06252" "" "" "" 0 "MAR02405" "AKGCITtm" "" "" "" "" "MNXR95654" "" "" "r2373" "r2373" "" "" "" 0 "MAR02406" "r2374" "" "" "" "" "MNXR106255" "" "" "r2374" "r2374" "" "" "" 0 "MAR02413" "r2375" "" "" "" "" "MNXR106256" "" "" "r2375" "r2375" "" "" "" 0 @@ -7901,10 +7837,10 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR02784" "RE1448N" "" "" "" "" "MNXR103512" "" "" "RE1448N" "RE1448N" "" "" "" 0 "MAR02786" "" "" "" "" "" "" "" "" "RE1514M" "RE1514M" "" "" "" 0 "MAR02802" "" "" "" "" "" "" "" "" "RE1514X" "RE1514X" "" "" "" 0 -"MAR02804" "RE1516X" "" "" "" "" "" "" "" "RE1516X" "RE1516X" "" "" "" 0 -"MAR02808" "RE1517X" "" "" "" "" "" "" "" "RE1517X" "RE1517X" "" "" "" 0 -"MAR02810" "RE1518X" "" "" "" "" "" "" "" "RE1518X" "RE1518X" "" "" "" 0 -"MAR02818" "RE1519X" "" "" "" "" "" "" "" "RE1519X" "RE1519X" "" "" "" 0 +"MAR02804" "RE1516X" "RE1516X" "HMR_3301" "" "" "" "" "RCR12606" "RE1516X" "RE1516X;HMR_3301" "" "" "" 0 +"MAR02808" "RE1517X" "RE1517X" "HMR_3306" "" "" "" "" "RCR12610" "RE1517X" "RE1517X;HMR_3306;MAR00306" "" "" "" 0 +"MAR02810" "RE1518X" "RE1518X" "HMR_3311" "" "" "" "" "RCR14519" "RE1518X" "RE1518X;HMR_3311;MAR03311" "" "" "" 0 +"MAR02818" "RE1519X;FAOXC101C102x" "" "" "" "" "" "" "" "RE1519X;FAOXC101C102x" "RE1519X;FAOXC101C102x;MAR04966" "" "" "" 0 "MAR02820" "RE1525C" "" "" "" "" "MNXR103515" "" "" "RE1525C" "RE1525C" "" "" "" 0 "MAR02826" "RE1526C" "" "" "" "" "MNXR103516" "" "" "RE1526C" "RE1526C" "" "" "" 0 "MAR02828" "RE1527C" "" "" "" "" "MNXR103517" "" "" "RE1527C" "RE1527C" "" "" "" 0 @@ -7997,8 +7933,8 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR03271" "" "" "" "" "" "" "" "" "RE2911C" "RE2911C" "" "" "" 0 "MAR03273" "RE2912M" "" "" "" "" "" "" "" "RE2912M" "RE2912M" "" "" "" 0 "MAR03274" "" "" "" "" "" "" "" "" "RE2912X" "RE2912X" "" "" "" 0 -"MAR03276" "" "" "" "" "" "" "" "" "RE2913X" "RE2913X" "" "" "" 0 -"MAR03289" "" "" "" "" "" "" "" "" "RE2914X" "RE2914X" "" "" "" 0 +"MAR03276" "" "RE2913X" "HMR_3364" "" "" "" "" "RCR12576" "RE2913X" "RE2913X;HMR_3364;MAR03364" "" "" "" 0 +"MAR03289" "" "RE2914X" "HMR_3369" "" "" "" "" "RCR12580" "RE2914X" "RE2914X;HMR_3369;MAR03369" "" "" "" 0 "MAR03291" "" "" "" "" "" "" "" "" "RE2915M" "RE2915M" "" "" "" 0 "MAR03295" "" "" "" "" "" "" "" "" "RE2915X" "RE2915X" "" "" "" 0 "MAR03297" "" "" "" "" "" "" "" "" "RE2921M" "RE2921M" "" "" "" 0 @@ -8042,7 +7978,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR03437" "" "" "" "" "" "" "" "" "RE3147C" "RE3147C" "" "" "" 0 "MAR03439" "" "" "" "" "" "" "" "" "RE3148C" "RE3148C" "" "" "" 0 "MAR03440" "" "" "" "" "" "" "" "" "RE3148R" "RE3148R" "" "" "" 0 -"MAR03441" "RE3150C" "" "" "" "" "MNXR103806" "" "" "RE3150C" "RE3150C" "" "" "" 0 "MAR03443" "" "" "" "" "" "" "" "" "RE3151R" "RE3151R" "" "" "" 0 "MAR03485" "" "" "" "" "" "" "" "" "RE3161R" "RE3161R" "" "" "" 0 "MAR03494" "" "" "" "" "" "" "" "" "RE3165R" "RE3165R" "" "" "" 0 @@ -8065,11 +8000,9 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR03620" "RE3242C" "" "" "" "" "MNXR103847" "" "" "RE3242C" "RE3242C" "" "" "" 0 "MAR03623" "RE3243C" "" "" "" "" "MNXR103848" "" "" "RE3243C" "RE3243C" "" "" "" 0 "MAR03745" "RE3244C" "" "" "" "" "MNXR103849" "" "" "RE3244C" "RE3244C" "" "" "" 0 -"MAR03754" "" "" "" "" "" "" "" "" "RE3248M" "RE3248M" "" "" "" 0 -"MAR03756" "" "" "" "" "" "" "" "" "RE3248X" "RE3248X" "" "" "" 0 +"MAR03756" "" "" "" "" "" "" "" "" "RE3248X;RE3248M" "RE3248X;RE3248M;MAR03754" "" "" "" 0 "MAR03758" "RE3250C" "" "" "" "" "MNXR103850" "" "" "RE3250C" "RE3250C" "" "" "" 0 -"MAR03760" "" "" "" "" "" "" "" "" "RE3250M" "RE3250M" "" "" "" 0 -"MAR03764" "" "" "" "" "" "" "" "" "RE3250X" "RE3250X" "" "" "" 0 +"MAR03764" "" "" "" "" "" "" "" "" "RE3250X;RE3250M" "RE3250X;RE3250M;MAR03760" "" "" "" 0 "MAR03766" "RE3251C" "" "" "" "" "MNXR103851" "" "" "RE3251C" "RE3251C" "" "" "" 0 "MAR03768" "RE3251M" "" "" "" "" "MNXR103851" "" "" "RE3251M" "RE3251M" "" "" "" 0 "MAR03774" "RE3252C" "" "" "" "" "MNXR103852" "" "" "RE3252C" "RE3252C" "" "" "" 0 @@ -8169,7 +8102,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR04138" "" "" "" "" "" "" "" "" "EX_HC01943[e]" "EX_HC01943[e]" "" "" "" 0 "MAR04140" "" "" "" "" "" "" "" "" "EX_HC01944[e]" "EX_HC01944[e]" "" "" "" 0 "MAR04142" "EX_HC00822_e" "" "" "" "" "MNXR98137" "" "" "EX_HC00822[e]" "EX_HC00822[e]" "" "" "" 0 -"MAR04144" "EX_C02528_e" "" "" "" "" "MNXR98101" "" "" "EX_C02528[e]" "EX_C02528[e]" "" "" "" 0 "MAR04146" "EX_HC02192_e" "" "" "" "" "MNXR98156" "" "" "EX_HC02192[e]" "EX_HC02192[e]" "" "" "" 0 "MAR04148" "EX_HC02193_e" "" "" "" "" "MNXR98157" "" "" "EX_HC02193[e]" "EX_HC02193[e]" "" "" "" 0 "MAR04150" "EX_HC02195_e" "" "" "" "" "MNXR98159" "" "" "EX_HC02195[e]" "EX_HC02195[e]" "" "" "" 0 @@ -8254,7 +8186,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR04479" "C10DCCACT" "" "" "" "" "MNXR96374" "" "" "C10DCCACT" "C10DCCACT" "" "" "" 0 "MAR04491" "C10DCc" "" "" "" "" "MNXR96375" "" "" "C10DCc" "C10DCc" "" "" "" 0 "MAR04504" "C10OHc" "" "" "" "" "MNXR96376" "" "" "C10OHc" "C10OHc" "" "" "" 0 -"MAR04506" "C120CPT1" "" "" "" "" "" "" "" "C120CPT1" "C120CPT1" "" "" "" 0 "MAR04508" "C121CPT1" "" "" "" "" "" "" "" "C121CPT1" "C121CPT1" "" "" "" 0 "MAR04509" "C12DCACOT" "" "" "" "" "" "" "" "C12DCACOT" "C12DCACOT" "" "" "" 0 "MAR04511" "C12DCACT" "" "" "" "" "" "" "" "C12DCACT" "C12DCACT" "" "" "" 0 @@ -8336,7 +8267,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR04943" "EX_ivcrn_e" "" "" "" "" "MNXR98685" "" "" "EX_ivcrn[e]" "EX_ivcrn[e]" "" "" "" 0 "MAR04950" "EX_tetdec2crn_e" "" "" "" "" "" "" "" "EX_tetdec2crn[e]" "EX_tetdec2crn[e]" "" "" "" 0 "MAR04965" "EX_tetdece1crn_e" "" "" "" "" "" "" "" "EX_tetdece1crn[e]" "EX_tetdece1crn[e]" "" "" "" 0 -"MAR04966" "FAOXC101C102x" "" "" "" "" "" "" "" "FAOXC101C102x" "FAOXC101C102x" "" "" "" 0 "MAR04967" "FAOXC101C8m" "" "" "" "" "" "" "" "FAOXC101C8m" "FAOXC101C8m" "" "" "" 0 "MAR04968" "FAOXC101C8x" "" "" "" "" "" "" "" "FAOXC101C8x" "FAOXC101C8x" "" "" "" 0 "MAR04970" "FAOXC102C101m" "" "" "" "" "" "" "" "FAOXC102C101m" "FAOXC102C101m" "" "" "" 0 @@ -8529,7 +8459,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR06891" "CYSTALArBATtc" "" "" "" "" "MNXR97011" "" "" "CYSTALArBATtc" "CYSTALArBATtc" "" "" "" 0 "MAR06892" "CYSTLEUrBATtc" "" "" "" "" "MNXR97016" "" "" "CYSTLEUrBATtc" "CYSTLEUrBATtc" "" "" "" 0 "MAR06893" "FOLt" "" "" "" "" "MNXR99612" "" "" "FOLTle" "FOLTle" "" "" "" 0 -"MAR06896" "GLNATB0tc" "" "" "" "" "MNXR100248" "" "" "GLNATB0tc" "GLNATB0tc" "" "" "" 0 +"MAR06896" "GLNATB0tc;GLNB0AT3tc" "" "" "" "" "MNXR100248" "" "" "GLNATB0tc;GLNB0AT3tc" "GLNATB0tc;GLNB0AT3tc;MAR09887" "" "" "" 0 "MAR06897" "GLNyLATthc" "" "" "" "" "MNXR100264" "" "" "GLNyLATthc" "GLNyLATthc" "" "" "" 0 "MAR06898" "GLYGLYCNc" "" "" "" "" "MNXR100345" "" "" "GLYGLYCNc" "GLYGLYCNc" "" "" "" 0 "MAR06899" "GLYGLYPEPT1tc" "" "" "" "" "MNXR100346" "" "" "GLYGLYPEPT1tc" "GLYGLYPEPT1tc" "" "" "" 0 @@ -8898,7 +8828,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR10161" "CE2028t" "" "" "" "" "" "" "" "CE2028t" "CE2028t" "" "" "" 0 "MAR10162" "CE2176t" "" "" "" "" "" "" "" "CE2176t" "CE2176t" "" "" "" 0 "MAR10163" "CE2445t" "" "" "" "" "" "" "" "CE2445t" "CE2445t" "" "" "" 0 -"MAR10164" "" "" "" "" "" "" "" "" "CE2516t" "CE2516t" "" "" "" 0 "MAR10165" "CE2537ATP" "" "" "" "" "" "" "" "CE2537ATP" "CE2537ATP" "" "" "" 0 "MAR10166" "CE4843t" "" "" "" "" "" "" "" "CE4843t" "CE4843t" "" "" "" 0 "MAR10167" "CE4843td" "" "" "" "" "" "" "" "CE4843td" "CE4843td" "" "" "" 0 @@ -9082,7 +9011,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR10345" "EX_ttdcrn_e" "" "" "" "" "MNXR98998" "" "" "EX_ttdcrn[e]" "EX_ttdcrn[e]" "" "" "" 0 "MAR10346" "EX_txb2_e;EX_HC02180_e" "" "" "" "" "MNXR106236" "" "" "EX_txb2[e];EX_HC02180[e]" "EX_txb2[e]" "" "" "" 0 "MAR10347" "EX_urcan_e" "" "" "" "" "" "" "" "EX_urcan[e]" "EX_urcan[e]" "" "" "" 0 -"MAR10348" "EX_wharachd_e" "" "" "" "" "MNXR99036" "" "" "EX_wharachd[e]" "EX_wharachd[e]" "" "" "" 0 +"MAR10348" "EX_wharachd_e" "" "" "" "" "MNXR99036" "" "" "EX_wharachd[e]" "EX_wharachd[e];HMR_10025;MAR10025" "" "" "" 0 "MAR10349" "EX_xolest181_hs_e" "" "" "" "" "" "" "" "EX_xolest181_hs[e]" "EX_xolest181_hs[e]" "" "" "" 0 "MAR10350" "EX_xolest182_hs_e" "" "" "" "" "" "" "" "EX_xolest182_hs[e]" "EX_xolest182_hs[e]" "" "" "" 0 "MAR10351" "EX_xolest183_hs_e" "" "" "" "" "" "" "" "EX_xolest183_hs[e]" "EX_xolest183_hs[e]" "" "" "" 0 @@ -9166,7 +9095,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR10430" "EX_acglu_e" "" "" "" "" "" "" "" "EX_acglu[e]" "EX_acglu[e]" "" "" "" 0 "MAR10431" "EX_alltn_e" "" "" "" "" "MNXR98261" "" "" "EX_alltn[e]" "EX_alltn[e]" "" "" "" 0 "MAR10432" "EX_CE2510_e" "" "" "" "" "" "" "" "EX_CE2510[e]" "EX_CE2510[e]" "" "" "" 0 -"MAR10433" "" "" "" "" "" "" "" "" "EX_CE2516[e]" "EX_CE2516[e]" "" "" "" 0 "MAR10434" "EX_ddca_e" "" "" "" "" "MNXR98403" "" "" "EX_ddca[e]" "EX_ddca[e]" "" "" "" 0 "MAR10435" "EX_glyc2p_e" "" "" "" "" "MNXR98598" "" "" "EX_glyc2p[e]" "EX_glyc2p[e]" "" "" "" 0 "MAR10436" "EX_glyclt_e" "" "" "" "" "MNXR98603" "" "" "EX_glyclt[e]" "EX_glyclt[e]" "" "" "" 0 @@ -9180,7 +9108,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR10444" "ACHOMm" "" "" "" "" "" "" "" "ACHOMm" "ACHOMm" "" "" "" 0 "MAR10445" "HC02195c" "" "" "" "" "" "" "" "HC02195c" "HC02195c" "" "" "" 0 "MAR10446" "HC02196c" "" "" "" "" "" "" "" "HC02196c" "HC02196c" "" "" "" 0 -"MAR10447" "HC02220c" "" "" "" "" "" "" "" "HC02220c" "HC02220c" "" "" "" 0 "MAR10448" "7KLITCHOLc" "" "" "" "" "" "" "" "7KLITCHOLc" "7KLITCHOLc" "" "" "" 0 "MAR10449" "HC02194c" "" "" "" "" "" "" "" "HC02194c" "HC02194c" "" "" "" 0 "MAR10450" "URSCHOLCOAc" "" "" "" "" "" "" "" "URSCHOLCOAc" "URSCHOLCOAc" "" "" "" 0 @@ -9199,12 +9126,9 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR10463" "" "" "" "" "" "" "" "" "INDOLEup" "INDOLEup" "" "" "" 0 "MAR10464" "" "" "" "" "" "" "" "" "INDSt" "INDSt" "" "" "" 0 "MAR10465" "PCRESOLup" "" "" "" "" "" "" "" "PCRESOLup" "PCRESOLup" "" "" "" 0 -"MAR10466" "PCSsec" "" "" "" "" "" "" "" "PCSsec" "PCSsec" "" "" "" 0 -"MAR10467" "" "" "" "" "" "" "" "" "PCSup" "PCSup" "" "" "" 0 -"MAR10468" "" "" "" "" "" "" "" "" "3HCINNMup" "3HCINNMup" "" "" "" 0 -"MAR10469" "" "" "" "" "" "" "" "" "3HCINNMsec" "3HCINNMsec" "" "" "" 0 -"MAR10470" "" "" "" "" "" "" "" "" "3HPPAup" "3HPPAup" "" "" "" 0 -"MAR10471" "" "" "" "" "" "" "" "" "3HPPAsec" "3HPPAsec" "" "" "" 0 +"MAR10466" "PCSsec" "" "" "" "" "" "" "" "PCSsec;PCSup" "PCSsec;PCSup" "" "" "" 0 +"MAR10468" "" "" "" "" "" "" "" "" "3HCINNMup;3HCINNMsec" "3HCINNMup;3HCINNMsec" "" "" "" 0 +"MAR10470" "" "" "" "" "" "" "" "" "3HPPAup;3HPPAsec" "3HPPAup;3HPPAsec" "" "" "" 0 "MAR10472" "" "" "" "" "" "" "" "" "EX_3hcinnm[e]" "EX_3hcinnm[e]" "" "" "" 0 "MAR10473" "" "" "" "" "" "" "" "" "EX_3hppa[e]" "EX_3hppa[e]" "" "" "" 0 "MAR10474" "EX_bgly_e" "" "" "" "" "" "" "" "EX_bgly[e]" "EX_bgly[e]" "" "" "" 0 @@ -10303,10 +10227,10 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR11580" "CE7172UPKt" "" "" "" "" "" "" "" "CE7172UPKt" "CE7172UPKt" "" "" "" 0 "MAR11581" "NRVNCABCt" "" "" "" "" "" "" "" "NRVNCABCt" "NRVNCABCt" "" "" "" 0 "MAR11582" "PAFABCt" "" "" "" "" "" "" "" "PAFABCt" "PAFABCt" "" "" "" 0 -"MAR11583" "PAIL_hs_SECt" "" "" "" "" "" "" "" "PAIL_hs_SECt" "PAIL_hs_SECt" "" "" "" 0 -"MAR11584" "PAILPALM_HSSECt" "" "" "" "" "" "" "" "PAILPALM_HSSECt" "PAILPALM_HSSECt" "" "" "" 0 -"MAR11585" "PAILR_HSSECt" "" "" "" "" "" "" "" "PAILR_HSSECt" "PAILR_HSSECt" "" "" "" 0 -"MAR11586" "" "" "" "" "" "" "" "" "PAILSTE_HSSECt" "PAILSTE_HSSECt" "" "" "" 0 +"MAR11583" "PAIL_hs_SECt" "" "" "" "" "" "" "" "PAIL_hs_SECt;PAIL_hs_t1e" "PAIL_hs_SECt;PAIL_hs_t1e" "" "" "" 0 +"MAR11584" "PAILPALM_HSSECt" "" "" "" "" "" "" "" "PAILPALM_HSSECt;PAILPALM_HSt1e" "PAILPALM_HSSECt;PAILPALM_HSt1e" "" "" "" 0 +"MAR11585" "PAILR_HSSECt" "" "" "" "" "" "" "" "PAILR_HSSECt;PAILR_HSt1e" "PAILR_HSSECt;PAILR_HSt1e" "" "" "" 0 +"MAR11586" "" "" "" "" "" "" "" "" "PAILSTE_HSSECt;PAILSTE_HSt1e" "PAILSTE_HSSECt;PAILSTE_HSt1e" "" "" "" 0 "MAR11587" "PCHLN225_HSABCt" "" "" "" "" "" "" "" "PCHLN225_HSABCt" "PCHLN225_HSABCt" "" "" "" 0 "MAR11588" "PCHOL2LINL_HSABCt" "" "" "" "" "" "" "" "PCHOL2LINL_HSABCt" "PCHOL2LINL_HSABCt" "" "" "" 0 "MAR11589" "PCHOL2OLE_HSABCt" "" "" "" "" "" "" "" "PCHOL2OLE_HSABCt" "PCHOL2OLE_HSABCt" "" "" "" 0 @@ -10335,29 +10259,25 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR11612" "PCHOLSTE_HSABCt" "" "" "" "" "" "" "" "PCHOLSTE_HSABCt" "PCHOLSTE_HSABCt" "" "" "" 0 "MAR11627" "PEPALM_HSASBCt" "" "" "" "" "" "" "" "PEPALM_HSASBCt" "PEPALM_HSASBCt" "" "" "" 0 "MAR11629" "SPHMYLN_HsSECt" "" "" "" "" "" "" "" "SPHMYLN_HsSECt" "SPHMYLN_HsSECt" "" "" "" 0 -"MAR11630" "SPHMYLN180241_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN180241_hs_SECt" "SPHMYLN180241_hs_SECt" "" "" "" 0 -"MAR11631" "SPHMYLN18114_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18114_hs_SECt" "SPHMYLN18114_hs_SECt" "" "" "" 0 -"MAR11632" "SPHMYLN18115_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18115_hs_SECt" "SPHMYLN18115_hs_SECt" "" "" "" 0 -"MAR11633" "SPHMYLN18116_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18116_hs_SECt" "SPHMYLN18116_hs_SECt" "" "" "" 0 -"MAR11634" "SPHMYLN181161_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN181161_hs_SECt" "SPHMYLN181161_hs_SECt" "" "" "" 0 -"MAR11635" "SPHMYLN18117_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18117_hs_SECt" "SPHMYLN18117_hs_SECt" "" "" "" 0 -"MAR11636" "SPHMYLN18118_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18118_hs_SECt" "SPHMYLN18118_hs_SECt" "" "" "" 0 -"MAR11637" "SPHMYLN181181_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN181181_hs_SECt" "SPHMYLN181181_hs_SECt" "" "" "" 0 -"MAR11638" "SPHMYLN18120_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18120_hs_SECt" "SPHMYLN18120_hs_SECt" "" "" "" 0 -"MAR11639" "SPHMYLN181201_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN181201_hs_SECt" "SPHMYLN181201_hs_SECt" "" "" "" 0 -"MAR11640" "SPHMYLN18121_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18121_hs_SECt" "SPHMYLN18121_hs_SECt" "" "" "" 0 -"MAR11641" "SPHMYLN18122_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18122_hs_SECt" "SPHMYLN18122_hs_SECt" "" "" "" 0 -"MAR11642" "SPHMYLN181221_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN181221_hs_SECt" "SPHMYLN181221_hs_SECt" "" "" "" 0 -"MAR11643" "SPHMYLN18123_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18123_hs_SECt" "SPHMYLN18123_hs_SECt" "" "" "" 0 -"MAR11644" "SPHMYLN1824_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN1824_hs_SECt" "SPHMYLN1824_hs_SECt" "" "" "" 0 -"MAR11645" "SPHMYLN1825_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN1825_hs_SECt" "SPHMYLN1825_hs_SECt" "" "" "" 0 +"MAR11630" "SPHMYLN180241_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN180241_hs_SECt;SPHMYLN180241_hs_t1" "SPHMYLN180241_hs_SECt;SPHMYLN180241_hs_t1" "" "" "" 0 +"MAR11631" "SPHMYLN18114_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18114_hs_SECt;SPHMYLN18114_hs_t1" "SPHMYLN18114_hs_SECt;SPHMYLN18114_hs_t1" "" "" "" 0 +"MAR11632" "SPHMYLN18115_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18115_hs_SECt;SPHMYLN18115_hs_t1" "SPHMYLN18115_hs_SECt;SPHMYLN18115_hs_t1" "" "" "" 0 +"MAR11633" "SPHMYLN18116_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18116_hs_SECt;SPHMYLN18116_hs_t1" "SPHMYLN18116_hs_SECt;SPHMYLN18116_hs_t1" "" "" "" 0 +"MAR11634" "SPHMYLN181161_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN181161_hs_SECt;SPHMYLN181161_hs_t1" "SPHMYLN181161_hs_SECt;SPHMYLN181161_hs_t1" "" "" "" 0 +"MAR11635" "SPHMYLN18117_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18117_hs_SECt;SPHMYLN18117_hs_t1" "SPHMYLN18117_hs_SECt;SPHMYLN18117_hs_t1" "" "" "" 0 +"MAR11636" "SPHMYLN18118_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18118_hs_SECt;SPHMYLN18118_hs_t1" "SPHMYLN18118_hs_SECt;SPHMYLN18118_hs_t1" "" "" "" 0 +"MAR11637" "SPHMYLN181181_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN181181_hs_SECt;SPHMYLN181181_hs_t1" "SPHMYLN181181_hs_SECt;SPHMYLN181181_hs_t1" "" "" "" 0 +"MAR11638" "SPHMYLN18120_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18120_hs_SECt;SPHMYLN18120_hs_t1" "SPHMYLN18120_hs_SECt;SPHMYLN18120_hs_t1" "" "" "" 0 +"MAR11639" "SPHMYLN181201_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN181201_hs_SECt;SPHMYLN181201_hs_t1" "SPHMYLN181201_hs_SECt;SPHMYLN181201_hs_t1" "" "" "" 0 +"MAR11640" "SPHMYLN18121_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18121_hs_SECt;SPHMYLN18121_hs_t1" "SPHMYLN18121_hs_SECt;SPHMYLN18121_hs_t1" "" "" "" 0 +"MAR11641" "SPHMYLN18122_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18122_hs_SECt;SPHMYLN18122_hs_t1" "SPHMYLN18122_hs_SECt;SPHMYLN18122_hs_t1" "" "" "" 0 +"MAR11642" "SPHMYLN181221_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN181221_hs_SECt;SPHMYLN181221_hs_t1" "SPHMYLN181221_hs_SECt;SPHMYLN181221_hs_t1" "" "" "" 0 +"MAR11643" "SPHMYLN18123_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN18123_hs_SECt;SPHMYLN18123_hs_t1" "SPHMYLN18123_hs_SECt;SPHMYLN18123_hs_t1" "" "" "" 0 +"MAR11644" "SPHMYLN1824_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN1824_hs_SECt;SPHMYLN1824_hs_t1" "SPHMYLN1824_hs_SECt;SPHMYLN1824_hs_t1" "" "" "" 0 +"MAR11645" "SPHMYLN1825_hs_SECt" "" "" "" "" "" "" "" "SPHMYLN1825_hs_SECt;SPHMYLN1825_hs_t1" "SPHMYLN1825_hs_SECt;SPHMYLN1825_hs_t1" "" "" "" 0 "MAR11646" "3AIBt1" "" "" "" "" "" "" "" "3AIBt1" "3AIBt1" "" "" "" 0 "MAR11647" "APRGSTRNt1e" "" "" "" "" "" "" "" "APRGSTRNt1e" "APRGSTRNt1e" "" "" "" 0 "MAR11648" "DIGALSGALSIDEATPte" "" "" "" "" "" "" "" "DIGALSGALSIDEATPte" "DIGALSGALSIDEATPte" "" "" "" 0 -"MAR11649" "" "" "" "" "" "" "" "" "PAIL_hs_t1e" "PAIL_hs_t1e" "" "" "" 0 -"MAR11650" "" "" "" "" "" "" "" "" "PAILR_HSt1e" "PAILR_HSt1e" "" "" "" 0 -"MAR11651" "" "" "" "" "" "" "" "" "PAILPALM_HSt1e" "PAILPALM_HSt1e" "" "" "" 0 -"MAR11652" "" "" "" "" "" "" "" "" "PAILSTE_HSt1e" "PAILSTE_HSt1e" "" "" "" 0 "MAR11653" "PCHOL2LINL_HSt1e" "" "" "" "" "" "" "" "PCHOL2LINL_HSt1e" "PCHOL2LINL_HSt1e" "" "" "" 0 "MAR11654" "PCHOL2OLE_HSt1e" "" "" "" "" "" "" "" "PCHOL2OLE_HSt1e" "PCHOL2OLE_HSt1e" "" "" "" 0 "MAR11655" "PCHOL2STE_HSt1e" "" "" "" "" "" "" "" "PCHOL2STE_HSt1e" "PCHOL2STE_HSt1e" "" "" "" 0 @@ -10402,39 +10322,22 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR11694" "PESTE_HSt1e" "" "" "" "" "" "" "" "PESTE_HSt1e" "PESTE_HSt1e" "" "" "" 0 "MAR11695" "SPHMYLN_HsATPte" "" "" "" "" "" "" "" "SPHMYLN_HsATPte" "SPHMYLN_HsATPte" "" "" "" 0 "MAR11696" "SPHMYLN180241_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN180241_hs_ATPt" "SPHMYLN180241_hs_ATPt" "" "" "" 0 -"MAR11697" "" "" "" "" "" "" "" "" "SPHMYLN180241_hs_t1" "SPHMYLN180241_hs_t1" "" "" "" 0 "MAR11698" "SPHMYLN18114_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN18114_hs_ATPt" "SPHMYLN18114_hs_ATPt" "" "" "" 0 -"MAR11699" "" "" "" "" "" "" "" "" "SPHMYLN18114_hs_t1" "SPHMYLN18114_hs_t1" "" "" "" 0 "MAR11700" "SPHMYLN18115_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN18115_hs_ATPt" "SPHMYLN18115_hs_ATPt" "" "" "" 0 -"MAR11701" "" "" "" "" "" "" "" "" "SPHMYLN18115_hs_t1" "SPHMYLN18115_hs_t1" "" "" "" 0 "MAR11702" "SPHMYLN18116_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN18116_hs_ATPt" "SPHMYLN18116_hs_ATPt" "" "" "" 0 -"MAR11703" "" "" "" "" "" "" "" "" "SPHMYLN18116_hs_t1" "SPHMYLN18116_hs_t1" "" "" "" 0 "MAR11704" "SPHMYLN181161_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN181161_hs_ATPt" "SPHMYLN181161_hs_ATPt" "" "" "" 0 -"MAR11705" "" "" "" "" "" "" "" "" "SPHMYLN181161_hs_t1" "SPHMYLN181161_hs_t1" "" "" "" 0 "MAR11706" "SPHMYLN18117_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN18117_hs_ATPt" "SPHMYLN18117_hs_ATPt" "" "" "" 0 -"MAR11707" "" "" "" "" "" "" "" "" "SPHMYLN18117_hs_t1" "SPHMYLN18117_hs_t1" "" "" "" 0 "MAR11708" "SPHMYLN18118_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN18118_hs_ATPt" "SPHMYLN18118_hs_ATPt" "" "" "" 0 -"MAR11709" "" "" "" "" "" "" "" "" "SPHMYLN18118_hs_t1" "SPHMYLN18118_hs_t1" "" "" "" 0 "MAR11710" "SPHMYLN181181_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN181181_hs_ATPt" "SPHMYLN181181_hs_ATPt" "" "" "" 0 -"MAR11711" "" "" "" "" "" "" "" "" "SPHMYLN181181_hs_t1" "SPHMYLN181181_hs_t1" "" "" "" 0 "MAR11712" "SPHMYLN18120_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN18120_hs_ATPt" "SPHMYLN18120_hs_ATPt" "" "" "" 0 -"MAR11713" "" "" "" "" "" "" "" "" "SPHMYLN18120_hs_t1" "SPHMYLN18120_hs_t1" "" "" "" 0 "MAR11714" "SPHMYLN181201_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN181201_hs_ATPt" "SPHMYLN181201_hs_ATPt" "" "" "" 0 -"MAR11715" "" "" "" "" "" "" "" "" "SPHMYLN181201_hs_t1" "SPHMYLN181201_hs_t1" "" "" "" 0 "MAR11716" "SPHMYLN18121_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN18121_hs_ATPt" "SPHMYLN18121_hs_ATPt" "" "" "" 0 -"MAR11717" "" "" "" "" "" "" "" "" "SPHMYLN18121_hs_t1" "SPHMYLN18121_hs_t1" "" "" "" 0 "MAR11718" "SPHMYLN18122_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN18122_hs_ATPt" "SPHMYLN18122_hs_ATPt" "" "" "" 0 -"MAR11719" "" "" "" "" "" "" "" "" "SPHMYLN18122_hs_t1" "SPHMYLN18122_hs_t1" "" "" "" 0 "MAR11720" "SPHMYLN181221_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN181221_hs_ATPt" "SPHMYLN181221_hs_ATPt" "" "" "" 0 -"MAR11721" "" "" "" "" "" "" "" "" "SPHMYLN181221_hs_t1" "SPHMYLN181221_hs_t1" "" "" "" 0 "MAR11722" "SPHMYLN18123_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN18123_hs_ATPt" "SPHMYLN18123_hs_ATPt" "" "" "" 0 -"MAR11723" "" "" "" "" "" "" "" "" "SPHMYLN18123_hs_t1" "SPHMYLN18123_hs_t1" "" "" "" 0 "MAR11724" "SPHMYLN1824_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN1824_hs_ATPt" "SPHMYLN1824_hs_ATPt" "" "" "" 0 -"MAR11725" "" "" "" "" "" "" "" "" "SPHMYLN1824_hs_t1" "SPHMYLN1824_hs_t1" "" "" "" 0 "MAR11726" "SPHMYLN1825_hs_ATPt" "" "" "" "" "" "" "" "SPHMYLN1825_hs_ATPt" "SPHMYLN1825_hs_ATPt" "" "" "" 0 -"MAR11727" "" "" "" "" "" "" "" "" "SPHMYLN1825_hs_t1" "SPHMYLN1825_hs_t1" "" "" "" 0 -"MAR11728" "" "" "" "" "" "" "" "" "2HXIC_Lt1e" "2HXIC_Lt1e" "" "" "" 0 -"MAR11729" "" "" "" "" "" "" "" "" "2HXIC_Lt2e" "2HXIC_Lt2e" "" "" "" 0 +"MAR11728" "" "" "" "" "" "" "" "" "2HXIC_Lt1e;2HXIC_Lt2e" "2HXIC_Lt1e;2HXIC_Lt2e" "" "" "" 0 "MAR11730" "" "" "" "" "" "" "" "" "EX_2hxic_L[e]" "EX_2hxic_L[e]" "" "" "" 0 "MAR11731" "2HYDOGOAT3t" "" "" "" "" "" "" "" "2HYDOGOAT3t" "2HYDOGOAT3t" "" "" "" 0 "MAR11732" "" "" "" "" "" "" "" "" "EX_2hydog[e]" "EX_2hydog[e]" "" "" "" 0 @@ -10681,21 +10584,16 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR11983" "EX_idl_hs_e" "" "" "" "" "" "" "" "EX_idl_hs[e]" "EX_idl_hs[e]" "" "" "" 0 "MAR11984" "EX_ldl_hs_e" "" "" "" "" "" "" "" "EX_ldl_hs[e]" "EX_ldl_hs[e]" "" "" "" 0 "MAR11985" "EX_hdl_hs_e" "" "" "" "" "" "" "" "EX_hdl_hs[e]" "EX_hdl_hs[e]" "" "" "" 0 -"MAR11986" "" "" "" "" "" "" "" "" "HC00005te" "HC00005te" "" "" "" 0 +"MAR11986" "" "" "" "" "" "" "" "" "HC00005te;HC00005t1e" "HC00005te;HC00005t1e" "" "" "" 0 "MAR11987" "EX_HC00005_e" "" "" "" "" "" "" "" "EX_HC00005[e]" "EX_HC00005[e]" "" "" "" 0 -"MAR11988" "" "" "" "" "" "" "" "" "HC00005t1e" "HC00005t1e" "" "" "" 0 -"MAR11989" "" "" "" "" "" "" "" "" "HC00006te" "HC00006te" "" "" "" 0 +"MAR11989" "" "" "" "" "" "" "" "" "HC00006te;HC00006t1e" "HC00006te;HC00006t1e" "" "" "" 0 "MAR11990" "EX_HC00006_e" "" "" "" "" "" "" "" "EX_HC00006[e]" "EX_HC00006[e]" "" "" "" 0 -"MAR11991" "" "" "" "" "" "" "" "" "HC00006t1e" "HC00006t1e" "" "" "" 0 -"MAR11992" "" "" "" "" "" "" "" "" "HC00007te" "HC00007te" "" "" "" 0 +"MAR11992" "" "" "" "" "" "" "" "" "HC00007te;HC00007t1e" "HC00007te;HC00007t1e" "" "" "" 0 "MAR11993" "EX_HC00007_e" "" "" "" "" "" "" "" "EX_HC00007[e]" "EX_HC00007[e]" "" "" "" 0 -"MAR11994" "" "" "" "" "" "" "" "" "HC00007t1e" "HC00007t1e" "" "" "" 0 -"MAR11995" "" "" "" "" "" "" "" "" "HC00008te" "HC00008te" "" "" "" 0 +"MAR11995" "" "" "" "" "" "" "" "" "HC00008te;HC00008t1e" "HC00008te;HC00008t1e" "" "" "" 0 "MAR11996" "EX_HC00008_e" "" "" "" "" "" "" "" "EX_HC00008[e]" "EX_HC00008[e]" "" "" "" 0 -"MAR11997" "" "" "" "" "" "" "" "" "HC00008t1e" "HC00008t1e" "" "" "" 0 -"MAR11998" "" "" "" "" "" "" "" "" "HC00009te" "HC00009te" "" "" "" 0 +"MAR11998" "" "" "" "" "" "" "" "" "HC00009te;HC00009t1e" "HC00009te;HC00009t1e" "" "" "" 0 "MAR11999" "EX_HC00009_e" "" "" "" "" "" "" "" "EX_HC00009[e]" "EX_HC00009[e]" "" "" "" 0 -"MAR12000" "" "" "" "" "" "" "" "" "HC00009t1e" "HC00009t1e" "" "" "" 0 "MAR12001" "DOPASULT4" "" "" "" "" "" "" "" "DOPASULT4" "DOPASULT4" "" "" "" 0 "MAR12002" "UDPG4DOPA" "" "" "" "" "" "" "" "UDPG4DOPA" "UDPG4DOPA" "" "" "" 0 "MAR12003" "UDPG3DOPA" "" "" "" "" "" "" "" "UDPG3DOPA" "UDPG3DOPA" "" "" "" 0 @@ -10707,7 +10605,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR12009" "EX_dopa4glcur_e" "" "" "" "" "" "" "" "EX_dopa4glcur[e]" "EX_dopa4glcur[e]" "" "" "" 0 "MAR12010" "DOPA3GLCURt" "" "" "" "" "" "" "" "DOPA3GLCURt" "DOPA3GLCURt" "" "" "" 0 "MAR12011" "EX_dopa3glcur_e" "" "" "" "" "" "" "" "EX_dopa3glcur[e]" "EX_dopa3glcur[e]" "" "" "" 0 -"MAR12012" "DOPACHRMDC" "" "" "" "" "" "" "" "DOPACHRMDC" "DOPACHRMDC" "" "" "" 0 +"MAR12012" "DOPACHRMDC" "" "HMR_9733" "" "R03674" "MNXR108330" "" "RCR14346" "DOPACHRMDC;HMR_9733" "DOPACHRMDC;HMR_9733;MAR09733" "" "" "" 0 "MAR12013" "CE5026t" "" "" "" "" "" "" "" "CE5026t" "CE5026t" "" "" "" 0 "MAR12014" "GGTe_1" "" "" "" "" "" "" "" "GGTe_1" "GGTe_1" "" "" "" 0 "MAR12015" "CYSGLYPTASEe_1" "" "" "" "" "" "" "" "CYSGLYPTASEe_1" "CYSGLYPTASEe_1" "" "" "" 0 @@ -10717,7 +10615,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR12019" "LACROX" "" "" "" "" "" "" "" "LACROX" "LACROX" "" "" "" 0 "MAR12022" "DACT" "" "" "" "" "" "" "" "DACT" "DACT" "" "" "" 0 "MAR12023" "DACGST" "" "" "" "" "" "" "" "DACGST" "DACGST" "" "" "" 0 -"MAR12024" "TYRDHINDOX" "" "" "" "" "" "" "" "TYRDHINDOX" "TYRDHINDOX" "" "" "" 0 +"MAR12024" "TYRDHINDOX" "" "HMR_9734" "" "R04884" "MNXR109190" "" "RCR14347" "HMR_9734;TYRDHINDOX" "HMR_9734;TYRDHINDOX;MAR09734" "RHEA:33516" "RHEA:33515" "" 0 "MAR12025" "4GLU56DIHDINDt" "" "" "" "" "" "" "" "4GLU56DIHDINDt" "4GLU56DIHDINDt" "" "" "" 0 "MAR12026" "EX_4glu56dihdind_e" "" "" "" "" "" "" "" "EX_4glu56dihdind[e]" "EX_4glu56dihdind[e]" "" "" "" 0 "MAR12027" "5CYSDOPAt" "" "" "" "" "" "" "" "5CYSDOPAt" "5CYSDOPAt" "" "" "" 0 @@ -11729,7 +11627,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR13061" "EX_M03045_e" "" "" "" "" "" "" "" "EX_M03045[e]" "EX_M03045[e]" "" "" "" 0 "MAR13062" "EX_M03051_e" "" "" "" "" "" "" "" "EX_M03051[e]" "EX_M03051[e]" "" "" "" 0 "MAR13063" "EX_M03153_e" "" "" "" "" "" "" "" "EX_M03153[e]" "EX_M03153[e]" "" "" "" 0 -"MAR13064" "" "" "" "" "" "" "" "" "EX_M01268[e]" "EX_M01268[e]" "" "" "" 0 "MAR13065" "" "" "" "" "" "" "" "" "EX_HC02080[e]" "EX_HC02080[e]" "" "" "" 0 "MAR13067" "EX_M02837_e" "" "" "" "" "" "" "" "EX_M02837[e]" "EX_M02837[e]" "" "" "" 0 "MAR13068" "" "" "" "" "" "" "" "" "EX_M02382[e]" "EX_M02382[e]" "" "" "" 0 @@ -11748,7 +11645,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR13081" "CYOOm3i" "" "" "" "" "" "" "" "CYOOm3i" "CYOOm3i" "" "" "" 0 "MAR10023" "" "" "" "" "" "" "" "" "" "HMR_10023" "" "" "" 0 "MAR10024" "" "" "" "" "" "" "" "" "" "HMR_10024" "" "" "" 0 -"MAR10025" "" "" "" "" "" "" "" "" "" "HMR_10025" "" "" "" 0 "MAR10026" "" "" "" "" "" "" "" "" "" "HMR_10026" "" "" "" 0 "MAR10027" "" "" "" "" "" "" "" "" "" "HMR_10027" "" "" "" 0 "MAR10028" "" "" "" "" "" "" "" "" "" "HMR_10028" "" "" "" 0 @@ -11856,7 +11752,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR13085" "" "" "" "" "" "" "" "" "" "" "" "" "" 0 "MAR13086" "" "" "" "" "" "" "" "" "" "" "" "" "" 0 "MAR20001" "HMR_6633;RDH1;R_HMR_6633;R_RDH1;R_TRETINOLOR1;TRETINOLOR1" "" "" "" "R02124" "MNXR189842" "" "" "" "" "RHEA:21284" "" "" 0 -"MAR20002" "HMR_6633;RDH1;R_HMR_6633;R_RDH1;R_TRETINOLOR1;TRETINOLOR1" "" "" "" "R02124" "MNXR189842" "" "" "" "" "RHEA:21284" "" "" 0 "MAR20003" "RDH2;R_RDH2" "" "" "" "R08382" "MNXR103441" "" "" "" "" "RHEA:42052" "" "" 0 "MAR20005" "" "" "" "" "" "MNXR167709" "" "" "" "" "RHEA:39803" "" "" 0 "MAR20006" "" "" "" "" "" "MNXR167709" "" "" "" "" "RHEA:39803" "" "" 0 @@ -11910,7 +11805,6 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR20063" "ALDD7;R_ALDD7" "" "" "" "" "MNXR95759" "" "" "" "" "RHEA:44108" "" "" 0 "MAR20064" "" "" "" "" "R08146" "MNXR111724" "" "" "" "" "RHEA:24216" "" "" 0 "MAR20065" "" "" "" "" "R08146" "MNXR111724" "" "" "" "" "RHEA:24216" "" "" 0 -"MAR20066" "CAT;CATm;CATp;CATpp;CATr;R_CAT;R_CATm;R_CATp;R_CATpp;R_CATr" "" "" "" "R00009" "MNXR96455" "" "" "" "" "RHEA:20309" "" "" 0 "MAR20067" "" "" "" "" "" "MNXR133799" "" "" "" "" "RHEA:55936" "" "" 0 "MAR20068" "" "" "" "" "" "MNXR171534" "" "" "" "" "RHEA:60632" "" "" 0 "MAR20069" "" "" "" "" "" "" "" "" "" "" "" "" "" 0 @@ -11932,6 +11826,9 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR20101" "" "" "" "" "R12390" "MNXR163813" "" "" "" "" "RHEA:59244" "" "" 0 "MAR20110" "" "" "" "" "" "MNXR102097" "" "" "" "" "RHEA:15642" "RHEA:15641" "" 0 "MAR20111" "" "" "" "" "R00472" "MNXR188337" "" "" "" "" "RHEA:18182" "RHEA:18181" "" 0 +"MAR20112" "" "" "" "" "R04385" "MNXR96330" "" "" "" "" "" "RHEA:13501" "" 0 +"MAR20113" "" "" "" "" "" "" "" "" "" "" "" "" "" 0 +"MAR20114" "" "" "" "" "" "" "" "" "" "" "" "" "" 0 "MAR15001" "" "" "" "" "R01465" "MNXR103402" "R-HSA-6798667" "" "" "" "" "" "" 0 "MAR15003" "" "" "" "" "R06171" "MNXR104834" "" "" "" "" "" "" "" 0 "MAR15004" "" "" "" "" "R06601" "MNXR100652" "" "" "" "" "" "" "" 0 @@ -11992,12 +11889,12 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR15085" "" "" "" "" "" "" "" "" "" "" "" "" "" 0 "MAR15086" "" "" "" "" "" "" "" "" "" "" "" "" "" 0 "MAR15087" "" "" "" "" "" "" "" "" "" "" "" "" "" 0 +"MAR00443" "EBP1r" "" "" "" "" "MNXR96689" "" "" "EBP1r" "EBP1r" "" "" "" 0 "MAR01498" "LNSTLSr" "" "" "" "" "MNXR101117" "" "" "LNSTLSr" "LNSTLSr" "" "" "" 0 -"MAR01510" "LSTO2r" "" "" "" "" "MNXR101245" "" "" "LSTO2r" "LSTO2r" "" "" "" 0 +"MAR01508" "LSTO1r" "" "" "" "" "MNXR101244" "" "" "LSTO1r" "LSTO1r" "" "" "" 0 "MAR01714" "SQLEr" "" "" "" "" "MNXR104447" "" "" "SQLEr" "SQLEr" "" "" "" 0 "MAR01715" "SQLSr" "" "" "" "" "MNXR104529" "" "" "SQLSr" "SQLSr" "" "" "" 0 "MAR02200" "LNS14DMr" "" "" "" "" "MNXR101115" "" "" "r0781" "r0781" "" "" "" 0 -"MAR02339" "EBP2r" "" "" "" "" "MNXR96687" "" "" "EBP2r;r1381" "r1381" "" "" "" 0 "MAR05151" "" "" "HMR_5151" "r1092" "" "" "" "RCR14453" "HMR_5151;r1092" "HMR_5151" "" "" "" 0 "MAR04718" "PNTK" "R03018C" "HMR_4718" "r0586" "R03018" "MNXR103050" "" "RCR10403" "PNTK" "HMR_4718" "" "RHEA:16373" "" 0 "MAR04742" "ALASm" "R00830M" "HMR_4742" "r0195" "R00830" "MNXR95695" "" "RCR11313" "ALASm" "HMR_4742" "RHEA:12922" "RHEA:12921" "" 0 @@ -12008,7 +11905,7 @@ rxns rxnBiGGID rxnEHMNID rxnHMR2ID rxnHepatoNET1ID rxnKEGGID rxnMetaNetXID rxnRE "MAR04752" "" "R03220M" "HMR_4752" "r0608" "R03220" "MNXR96880" "" "RCR13873" "CPPPGO" "HMR_4752" "RHEA:18258" "RHEA:18257" "" 0 "MAR04485" "TMDPP" "R01570C" "HMR_4485" "r0352" "R01570" "MNXR104887" "" "RCR11165" "TMDPP" "HMR_4485" "RHEA:16040" "RHEA:16037" "" 0 "MAR08641" "DNDPt10m" "" "HMR_8641" "" "R04858" "MNXR97628" "" "RCR14407" "DNAMTn" "HMR_8641" "" "" "" 0 -"MAR04262" "NMNS" "R01271R" "HMR_4262" "r0306" "R01271" "MNXR101911" "" "RCR14668" "NMNS" "HMR_4262" "RHEA:16152" "RHEA:16149" "" 0 +"MAR04265" "" "" "HMR_4265" "" "" "" "" "RCR13751" "RNMK" "HMR_4265" "" "" "" 0 "MAR04269" "NADK" "R00104C" "HMR_4269" "r1091" "R00104" "MNXR101882" "" "RCR13753" "NADK" "HMR_4269" "RHEA:18630" "RHEA:18629" "" 0 "MAR08739" "SPRn" "" "HMR_8739" "" "R08208" "MNXR104500" "" "RCR14692" "SPRn" "HMR_8739" "" "RHEA:32627" "" 0 "MAR06634" "" "" "HMR_6634" "" "" "" "" "RCR13883" "HMR_6634" "HMR_6634" "" "" "" 0