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fastqc.html
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<!DOCTYPE html>
<html lang="en">
<head>
<!-- Declaration of meta tags -->
<meta charset="utf-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1">
<meta name="description" content="">
<meta name="author" content="">
<title>Group A Steered Research Project</title>
<!-- Bootstrap Core CSS -->
<link href="CSS/bootstrap.min.css" rel="stylesheet">
<!-- Custom CSS -->
<link href="CSS/4-col-portfolio.css" rel="stylesheet">
<!-- HTML5 Shim and Respond.js IE8 support of HTML5 elements and media queries -->
<!-- WARNING: Respond.js doesn't work if you view the page via file:// -->
<!--[if lt IE 9]>
<script src="https://oss.maxcdn.com/libs/html5shiv/3.7.0/html5shiv.js"></script>
<script src="https://oss.maxcdn.com/libs/respond.js/1.4.2/respond.min.js"></script>
<![endif]-->
</head>
<body>
<!-- Include background image -->
<body background="Images/geometry.png">
<!-- Navigation -->
<nav class="navbar navbar-inverse navbar-fixed-top" role="navigation">
<div class="container">
<!-- Brand and toggle get grouped for better mobile display -->
<div class="navbar-header">
<button type="button" class="navbar-toggle" data-toggle="collapse" data-target="#bs-example-navbar-collapse-1">
<span class="sr-only">Toggle navigation</span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
</button>
<a class="navbar-brand" href="index.html">Project Webserver</a>
</div>
<!-- Collect the nav links, forms, and other content for toggling -->
<div class="collapse navbar-collapse" id="bs-example-navbar-collapse-1">
<ul class="nav navbar-nav">
<li>
<a href="background.html">Analysis Summary</a>
</li>
<li class="dropdown"><a class="dropdown-toggle" data-toggle="dropdown" href="#">Data<span class="caret"></span></a>
<ul class="dropdown-menu">
<li><a href="gene_search.php">Expression Levels</a></li>
<li><a href="diff_exp.php">Differential Expression</a></li>
<li><a href="graph_data.html">Volcano Plot with R Shiny</a></li>
<li><a href="search_ucsc.php">Visualise Mapped Data</a></li>
<li><a href="fastqc.html">View FastQC Files</a></li>
</ul>
</li>
<li>
<a href="team.html">Team</a>
</li>
</ul>
</div>
<!-- /.navbar-collapse -->
</div>
<!-- /.container -->
</nav>
<!-- Page Content -->
<div class="container">
<!-- Page Heading -->
<div class="row">
<div class="col-lg-12">
<h1 class="page-header">FastQC Files
</h1>
<!-- a series of links to various factqc.html links -->
<article>
<h3>Control Rats</h3>
<table style="width:50%">
<tr>
<th>Untrimmed Paired End 1</th>
<th>Trimmed Paired End 1</th>
</tr>
<tr>
<td><a target="_blank" href="SRR1177973_untrimmed_paired_end_1_fastqc.html">7973</a></td>
<td><a target="_blank" href="SRR1177973_trimmed_paired_end_1_fastqc.html">7973</a></td>
</tr>
<tr>
<td><a target="_blank" href="SRR1178050_untrimmed_paired_end_1_fastqc.html">8050</a></td>
<td><a target="_blank" href="SRR1178050_trimmed_paired_end_1_fastqc.html">8050</a></td>
</tr>
</table>
<table style="width:50%">
<tr>
<th>Untrimmed Paired End 2</th>
<th>Trimmed Paired End 2</th>
</tr>
<tr>
<td><a target="_blank" href="SRR1177973_untrimmed_paired_end_2_fastqc.html">7973</a></td>
<td><a target="_blank" href="SRR1177973_trimmed_paired_end_2_fastqc.html">7973</a></td>
</tr>
<tr>
<td><a target="_blank" href="SRR1178050_untrimmed_paired_end_2_fastqc.html">8050</a></td>
<td><a target="_blank" href="SRR1178050_trimmed_paired_end_2_fastqc.html">8050</a></td>
</tr>
</table>
<p></p>
<p></p>
<h3>Test Rats</h3>
<table style="width:50%">
<tr>
<th>Untrimmed Paired End 1</th>
<th>Trimmed Paired End 1</th>
</tr>
<tr>
<td><a target="_blank" href="SRR1178033_untrimmed_paired_end_1_fastqc.html">8033</a></td>
<td><a target="_blank" href="SRR1178033_trimmed_paired_end_1_fastqc.html">8033</a></td>
</tr>
<tr>
<td><a target="_blank" href="SRR1178043_untrimmed_paired_end_1_fastqc.html">8043</a></td>
<td><a target="_blank" href="SRR1178043_trimmed_paired_end_1_fastqc.html">8043</a></td>
</tr>
<tr>
<td><a target="_blank" href="SRR1178059_untrimmed_paired_end_1_fastqc.html">8059</a></td>
<td><a target="_blank" href="SRR1178059_trimmed_paired_end_1_fastqc.html">8059</a></td>
</tr>
</table>
<table style="width:50%">
<tr>
<th>Untrimmed Paired End 2</th>
<th>Trimmed Paired End 2</th>
</tr>
<tr>
<td><a target="_blank" href="SRR1178033_untrimmed_paired_end_2_fastqc.html">8033</a></td>
<td><a target="_blank" href="SRR1178033_trimmed_paired_end_2_fastqc.html">8033</a></td>
</tr>
<tr>
<td><a target="_blank" href="SRR1178043_untrimmed_paired_end_2_fastqc.html">8043</a></td>
<td><a target="_blank" href="SRR1178043_trimmed_paired_end_2_fastqc.html">8043</a></td>
</tr>
<tr>
<td><a target="_blank" href="SRR1178059_untrimmed_paired_end_2_fastqc.html">8059</a></td>
<td><a target="_blank" href="SRR1178059_trimmed_paired_end_2_fastqc.html">8059</a></td>
</tr>
</table>
</article>
</div>
</div>
<br><br>
<!-- /.row -->
<hr>
<!-- Footer -->
<footer>
<div class="row">
<div class="col-lg-12">
<p>Group A Steered Research Project - MSc Bioinformatics @ University of Leicester - 2017</p>
</div>
</div>
<!-- /.row -->
</footer>
</div>
<!-- /.container -->
<!-- jQuery -->
<script src="https://ajax.googleapis.com/ajax/libs/jquery/3.2.1/jquery.min.js"></script>
<!-- Bootstrap Core JavaScript -->
<script src="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/js/bootstrap.min.js"></script>
</body>
</html>