_quarto.yml

project:
  type: website
  preview:
    # Change port if it's busy in your system or just remove this line so that It will automatically use any free port
    port: 4200
    browser: true


# These cannot be used as variables. They are reserved for the project configuration.
website:
  title: "Turing.jl"
  site-url: "https://turinglang.org/docs/"
  favicon: "assets/favicon.ico"
  search:
    location: navbar
    type: overlay
  navbar:
    logo: "assets/images/turing-logo.svg"
    logo-href: https://turinglang.org/
    background: "#073c44"
    foreground: "#ffffff"
    left:
      - href: getting-started/
        text: Get Started
      - href: tutorials/coin-flipping/
        text: Tutorials
      - href: https://turinglang.org/library/
        text: Libraries
      - href: https://turinglang.org/news/
        text: News
      - href: https://turinglang.org/team/
        text: Team
    right:
      # Current version
      - text: "v0.36"
        menu:
          - text: Changelog
            href: https://turinglang.org/docs/changelog.html
          - text: All Versions
            href: https://turinglang.org/docs/versions.html
    tools:
      - icon: twitter
        href: https://x.com/TuringLang
        text: Turing Twitter
      - icon: github
        href: https://github.com/TuringLang/Turing.jl
        text: Turing GitHub

  sidebar:
    - text: documentation
      collapse-level: 1
      contents:
        - getting-started/index.qmd
        - core-functionality/index.qmd

        - section: "User Guide"
          collapse-level: 1
          contents:
            - usage/automatic-differentiation/index.qmd
            - usage/custom-distribution/index.qmd
            - usage/probability-interface/index.qmd
            - usage/modifying-logprob/index.qmd
            - usage/generated-quantities/index.qmd
            - usage/mode-estimation/index.qmd
            - usage/performance-tips/index.qmd
            - usage/sampler-visualisation/index.qmd
            - usage/dynamichmc/index.qmd
            - usage/external-samplers/index.qmd

        - section: "Tutorials"
          contents:
            - tutorials/coin-flipping/index.qmd
            - tutorials/gaussian-mixture-models/index.qmd
            - tutorials/bayesian-logistic-regression/index.qmd
            - tutorials/bayesian-neural-networks/index.qmd
            - tutorials/hidden-markov-models/index.qmd
            - tutorials/bayesian-linear-regression/index.qmd
            - tutorials/infinite-mixture-models/index.qmd
            - tutorials/bayesian-poisson-regression/index.qmd
            - tutorials/multinomial-logistic-regression/index.qmd
            - tutorials/variational-inference/index.qmd
            - tutorials/bayesian-differential-equations/index.qmd
            - tutorials/probabilistic-pca/index.qmd
            - tutorials/bayesian-time-series-analysis/index.qmd
            - tutorials/gaussian-processes-introduction/index.qmd
            - tutorials/gaussian-process-latent-variable-models/index.qmd

        - section: "Developers"
          contents:
          - developers/contributing/index.qmd

          - section: "DynamicPPL's Compiler"
            collapse-level: 1
            contents:
              - developers/compiler/model-manual/index.qmd
              - developers/compiler/minituring-compiler/index.qmd
              - developers/compiler/minituring-contexts/index.qmd
              - developers/compiler/design-overview/index.qmd

          - section: "Variable Transformations"
            collapse-level: 1
            contents:
              - developers/transforms/distributions/index.qmd
              - developers/transforms/bijectors/index.qmd
              - developers/transforms/dynamicppl/index.qmd

          - section: "Inference (note: outdated)"
            collapse-level: 1
            contents:
              - developers/inference/abstractmcmc-interface/index.qmd
              - developers/inference/abstractmcmc-turing/index.qmd
              - developers/inference/variational-inference/index.qmd
              - developers/inference/implementing-samplers/index.qmd

  page-footer:
    background: "#073c44"
    left: |
      Turing is created by <a href="http://mlg.eng.cam.ac.uk/hong/" target="_blank">Hong Ge</a>, and lovingly maintained by the <a href="https://github.com/TuringLang/Turing.jl/graphs/contributors" target="_blank">core team</a> of volunteers. <br>
      The contents of this website are © 2024 under the terms of the <a href="https://github.com/TuringLang/Turing.jl/blob/master/LICENCE" target="_blank">MIT License</a>.

    right:
      - icon: twitter
        href: https://x.com/TuringLang
        aria-label: Turing Twitter
      - icon: github
        href: https://github.com/TuringLang/Turing.jl
        aria-label: Turing GitHub

  back-to-top-navigation: true
  repo-url: https://github.com/TuringLang/docs
  repo-actions: [edit, issue]
  repo-branch: master
  repo-link-target: _blank
  page-navigation: true

format:
  html:
    theme:
      light: cosmo
      dark: [cosmo, theming/theme-dark.scss]
    css: theming/styles.css
    smooth-scroll: true
    output-block-background: true
    toc: true
    toc-title: "Table of Contents"
    code-fold: false
    code-overflow: scroll
execute:
  echo: true
  output: true
  freeze: auto
include-in-header:
  - text: |
      <style>
        a {
          text-decoration: none;
        }
        a:hover {
          text-decoration: underline;
        }
      </style>

# These variables can be used in any qmd files, e.g. for links:
# the [Getting Started page]({{< meta get-started >}})
# Note that you don't need to prepend `../../` to the link, Quarto will figure
# it out automatically.

get-started: tutorials/docs-00-getting-started
tutorials-intro: tutorials/00-introduction
gaussian-mixture-model: tutorials/01-gaussian-mixture-model
logistic-regression: tutorials/02-logistic-regression
bayesian-neural-network: tutorials/03-bayesian-neural-network
hidden-markov-model: tutorials/04-hidden-markov-model
linear-regression: tutorials/05-linear-regression
infinite-mixture-model: tutorials/06-infinite-mixture-model
poisson-regression: tutorials/07-poisson-regression
multinomial-logistic-regression: tutorials/08-multinomial-logistic-regression
variational-inference: tutorials/09-variational-inference
bayesian-differential-equations: tutorials/10-bayesian-differential-equations
probabilistic-pca: tutorials/11-probabilistic-pca
gplvm: tutorials/12-gplvm
seasonal-time-series: tutorials/13-seasonal-time-series
using-turing-advanced: tutorials/docs-09-using-turing-advanced
using-turing-autodiff: tutorials/docs-10-using-turing-autodiff
using-turing-dynamichmc: tutorials/docs-11-using-turing-dynamichmc
using-turing: tutorials/docs-12-using-turing-guide
using-turing-performance-tips: tutorials/docs-13-using-turing-performance-tips
using-turing-sampler-viz: tutorials/docs-15-using-turing-sampler-viz
using-turing-external-samplers: tutorials/docs-16-using-turing-external-samplers
using-turing-mode-estimation: tutorials/docs-17-mode-estimation
usage-probability-interface: tutorials/usage-probability-interface
usage-custom-distribution: tutorials/usage-custom-distribution
usage-generated-quantities: tutorials/usage-generated-quantities
usage-modifying-logprob: tutorials/usage-modifying-logprob

contributing-guide: developers/contributing
dev-model-manual: developers/compiler/model-manual
contexts: developers/compiler/minituring-contexts
minituring: developers/compiler/minituring-compiler
using-turing-compiler: developers/compiler/design-overview
using-turing-abstractmcmc: developers/inference/abstractmcmc-turing
using-turing-interface: developers/inference/abstractmcmc-interface
using-turing-variational-inference: developers/inference/variational-inference
using-turing-implementing-samplers: developers/inference/implementing-samplers
dev-transforms-distributions: developers/transforms/distributions
dev-transforms-bijectors: developers/transforms/bijectors
dev-transforms-dynamicppl: developers/transforms/dynamicppl