diff --git a/jbrowse2/config/track_configs/p_pacificus_PRJNA12644_community_tracks.json b/jbrowse2/config/track_configs/p_pacificus_PRJNA12644_community_tracks.json new file mode 100644 index 00000000..197e035a --- /dev/null +++ b/jbrowse2/config/track_configs/p_pacificus_PRJNA12644_community_tracks.json @@ -0,0 +1,68 @@ +{ + "tracks": [ + { + "type": "FeatureTrack", + "trackId": "p_pacificus_PRJNA12644_community_edited_genes", + "name": "Community edited genes", + "assemblyNames": [ + "p_pacificus_PRJNA12644" + ], + "description": "A set of genes edited by the Pristionchus community. For more information see http://pristionchus.org/", + "category": [ + "Externally Sourced Resources", + "Community Annotations" + ], + "adapter": { + "type": "Gff3TabixAdapter", + "gffGzLocation": { + "locationType": "UriLocation", + "uri": "https://s3.amazonaws.com/agrjbrowse/MOD-jbrowses/WormBase/static_tracks/p_pacificus_PRJNA12644/pristionchus.sorted.gff3.gz" + }, + "index": { + "location": { + "locationType": "UriLocation", + "uri": "https://s3.amazonaws.com/agrjbrowse/MOD-jbrowses/WormBase/static_tracks/p_pacificus_PRJNA12644/pristionchus.sorted.gff3.gz.tbi" + } + } + }, + "textSearching": { + "textSearchAdapter": { + "type": "TrixTextSearchAdapter", + "textSearchAdapterId": "community_edited_genes-1708462386536-index", + "ixFilePath": { + "locationType": "UriLocation", + "uri": "https://s3.amazonaws.com/agrjbrowse/MOD-jbrowses/WormBase/static_tracks/p_pacificus_PRJNA12644/community_edited_genes-1708462386536-index.ix" + }, + "ixxFilePath": { + "locationType": "UriLocation", + "uri": "https://s3.amazonaws.com/agrjbrowse/MOD-jbrowses/WormBase/static_tracks/p_pacificus_PRJNA12644/community_edited_genes-1708462386536-index.ixx" + }, + "metaFilePath": { + "locationType": "UriLocation", + "uri": "https://s3.amazonaws.com/agrjbrowse/MOD-jbrowses/WormBase/static_tracks/p_pacificus_PRJNA12644/community_edited_genes-1708462386536-index_meta.json" + }, + "tracks": [ + "p_pacificus_PRJNA12644_community_edited_genes" + ], + "assemblyNames": [ + "p_pacificus_PRJNA12644" + ] + } + }, + "displays": [ + { + "type": "LinearBasicDisplay", + "displayId": "p_pacificus_PRJNA12644_community_edited_genes-LinearBasicDisplay", + "renderer": { + "type": "SvgFeatureRenderer", + "color1": "jexl:get(feature,'strand')>0?'#f19bf1':'#66e6d9'" + } + }, + { + "type": "LinearArcDisplay", + "displayId": "p_pacificus_PRJNA12644_community_edited_genes-LinearArcDisplay" + } + ] + } + ] +}