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Rename some Python scripts to be more explicit #1219

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maximemulder opened this issue Jan 2, 2025 · 1 comment
Open

Rename some Python scripts to be more explicit #1219

maximemulder opened this issue Jan 2, 2025 · 1 comment

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@maximemulder
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When I arrived in LORIS, one of the challenges of getting to know the codebase what to learn what scripts to use for what purpose. I think the naming could be improved to make it more simple or explicit:

  • run_dicom_archive_loader.py -> convert_dicom_archive_to_bids.py (the renaming I am the most interested in)
  • run_dicom_archive_validation.py-> validate_dicom_archive.py (for consistency)
  • run_nifti_insertion.py -> register_nifti.py (I like "register" to say we add something to the database without further processing it)
  • run_push_imaging_files_to_s3_pipeline.py -> push_imaging_files_to_s3.py (never used this script though)
  • bids_import.py -> import_bids.py (for consistency).
@maximemulder
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LORIS imaging meeting: The 27 release is already packed with changes, so this will probably be done in the next release.

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