CITATION.cff

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cff-version: 1.2.0
title: 'PhylogeneticGraph (PhyG) '
message: >-
  If you use this software, please cite it using the
  metadata from this file.
type: software
authors:
  - given-names: Ward
    family-names: Wheeler
    email: wheeler@amnh.org
    affiliation: American Museum of Natural History
    orcid: 'https://orcid.org/0000-0001-6977-984X'
repository-code: 'https://github.com/amnh/PhyG'
url: 'https://github.com/amnh/PhyG'
repository-artifact: 'https://github.com/amnh/PhyG-Integration-Tests'
abstract: >-
  Phylogenetic Graph (PhyG) is a multi-platform program
  designed to produce phylogenetic graphs from input data
  and graphs via heuristic searching of general phylogenetic
  graph space. The bio-informatics framework libraries of
  the broader Phylogenetic Haskell Analytic Network Engine
  (PHANE) project are the foundation upon which PhyG is
  constructed. PhyG offers vast functionality, including the
  optimization of unaligned sequences, and the ability to
  implement search strategies such as random addition
  sequence, swapping, and tree fusing. Furthermore, PhyG can
  generate outputs in the form of implied alignments and
  graphical representations of cladograms and graphs. What
  sets PhyG apart from other phylogenetic analysis programs,
  is the extension to broader classes of input data and
  phylogenetic graphs. The phylogenetic graph inputs and
  outputs of PhyG include trees, as well as softwired and
  hardwired networks.
license: BSD-3-Clause