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Week 1

Monday, May 14th

AM 9-12 am

  • tutorial: Welcome and brainhack school (Pierre Bellec)
  • tutorial: Git and github tutorial (Elizabeth M Dupre)

1-2 pm

  • pitch: LORIS, TOSI, CONP, datalad (Samir Das)
  • tutorial: conda and notebooks (Sebastian Urchs)

4-5 pm

Tuesday, May 15th

9-10:30 am

  • tutorial: Compute Canada (Tristan Glatard)
  • pitch: CBRAIN (Shawn Brown)

1-2 pm

  • pitch: containers (Greg Kiar)
  • pitch: NeuroVauld (Tal Yarkoni)
  • pitch: BIDS (Tal Yarkoni)
  • pitch: openneuro (Elizabeth M Dupre)
  • optional tutorial: git pull request (Elizabeth M Dupre)

4-5 pm

Wednesday, May 16th

9-10 am

  • pitch: Neurosynth (Jake Vogel)
  • pitch: fmri preprocessing & NIAK (Pierre Bellec)
  • pitch: nipype (Elizabeth M Dupre)
  • pitch: fmriprep (EMD)

1-2 pm

  • seminar - Daniel Margulies "Topographic principles of macroscale cortical connectivity"

2-3 pm

  • pitch: structural MRI processing (Mallar Chakravarty)
  • pitch: the MaGeT MRI brain segmentation pipeline (Mallar Chakravarty)
  • pitch: the qMRlab toolbox for quantitative MRI processing (Nikola Stikov)

4-5 pm

5-8 pm

  • open science beer and chinese (?) dinner

Thursday, May 17th

9-10 am

  • pitch: Deep learning and keras (Andrew Doyle)
  • pitch: Clustering / component analysis (Jake Vogel)
  • pitch: scikit-learn & pandas (Angela Tam)

1-2 pm

  • seminar - Tal Yarkoni "How to survive and thrive as an open scientist"

2-3 pm

  • pitch: nilearn (Jake Vogel)
  • pitch: Neurovault (Tal Yarkoni)
  • pitch: pliers (Tal Yarkoni)

4-5 pm

Friday, May 18th

9-10 am

  • pitch: M/EEG processing (Karim Jerbi) + + OMEGA (KJ?)
  • pitch: MNE (Anne-Lise)
  • pitch: OMEGA (Karim Jerbi)

1-2 pm

  • pitch: Binder and blog demos (Nikola Stikov) + graph & regression (BM)
  • pitch: figshare/zenodo (Pierre Bellec)
  • pitch: the qMRlab toolbox for quantitative MRI processing (Nikola Stikov)

4-5 pm