diff --git a/site/Cluster basics/Backups/index.html b/site/Cluster_basics/Backups/index.html similarity index 100% rename from site/Cluster basics/Backups/index.html rename to site/Cluster_basics/Backups/index.html diff --git a/site/Cluster basics/Headers/index.html b/site/Cluster_basics/Headers/index.html similarity index 100% rename from site/Cluster basics/Headers/index.html rename to site/Cluster_basics/Headers/index.html diff --git a/site/Cluster basics/Interactive/index.html b/site/Cluster_basics/Interactive/index.html similarity index 100% rename from site/Cluster basics/Interactive/index.html rename to site/Cluster_basics/Interactive/index.html diff --git a/site/Cluster basics/Screen/index.html b/site/Cluster_basics/Screen/index.html similarity index 100% rename from site/Cluster basics/Screen/index.html rename to site/Cluster_basics/Screen/index.html diff --git a/site/Cluster basics/Structure/index.html b/site/Cluster_basics/Structure/index.html similarity index 100% rename from site/Cluster basics/Structure/index.html rename to site/Cluster_basics/Structure/index.html diff --git a/site/Cluster basics/Submitting jobs/Qmap/index.html b/site/Cluster_basics/Submitting_jobs/Qmap/index.html similarity index 100% rename from site/Cluster basics/Submitting jobs/Qmap/index.html rename to site/Cluster_basics/Submitting_jobs/Qmap/index.html diff --git a/site/Cluster basics/Submitting jobs/SLURM/index.html b/site/Cluster_basics/Submitting_jobs/SLURM/index.html similarity index 100% rename from site/Cluster basics/Submitting jobs/SLURM/index.html rename to site/Cluster_basics/Submitting_jobs/SLURM/index.html diff --git a/site/Datasets/General datasets/BeastAML/index.html b/site/Datasets/General_datasets/BeastAML/index.html similarity index 100% rename from site/Datasets/General datasets/BeastAML/index.html rename to site/Datasets/General_datasets/BeastAML/index.html diff --git a/site/Datasets/General datasets/CGCI/index.html b/site/Datasets/General_datasets/CGCI/index.html similarity index 100% rename from site/Datasets/General datasets/CGCI/index.html rename to site/Datasets/General_datasets/CGCI/index.html diff --git a/site/Datasets/General datasets/CPTAC/index.html b/site/Datasets/General_datasets/CPTAC/index.html similarity index 100% rename from site/Datasets/General datasets/CPTAC/index.html rename to site/Datasets/General_datasets/CPTAC/index.html diff --git a/site/Datasets/General datasets/GENIE/index.html b/site/Datasets/General_datasets/GENIE/index.html similarity index 100% rename from site/Datasets/General datasets/GENIE/index.html rename to site/Datasets/General_datasets/GENIE/index.html diff --git a/site/Datasets/General datasets/Hartwig/index.html b/site/Datasets/General_datasets/Hartwig/index.html similarity index 100% rename from site/Datasets/General datasets/Hartwig/index.html rename to site/Datasets/General_datasets/Hartwig/index.html diff --git a/site/Datasets/General datasets/ICGC/index.html b/site/Datasets/General_datasets/ICGC/index.html similarity index 100% rename from site/Datasets/General datasets/ICGC/index.html rename to site/Datasets/General_datasets/ICGC/index.html diff --git a/site/Datasets/General datasets/PCAWG/index.html b/site/Datasets/General_datasets/PCAWG/index.html similarity index 100% rename from site/Datasets/General datasets/PCAWG/index.html rename to site/Datasets/General_datasets/PCAWG/index.html diff --git a/site/Datasets/General datasets/PedcBioPortal/index.html b/site/Datasets/General_datasets/PedcBioPortal/index.html similarity index 100% rename from site/Datasets/General datasets/PedcBioPortal/index.html rename to site/Datasets/General_datasets/PedcBioPortal/index.html diff --git a/site/Datasets/General datasets/StJude/index.html b/site/Datasets/General_datasets/StJude/index.html similarity index 100% rename from site/Datasets/General datasets/StJude/index.html rename to site/Datasets/General_datasets/StJude/index.html diff --git a/site/Datasets/General datasets/StJudeLife/index.html b/site/Datasets/General_datasets/StJudeLife/index.html similarity index 100% rename from site/Datasets/General datasets/StJudeLife/index.html rename to site/Datasets/General_datasets/StJudeLife/index.html diff --git a/site/Datasets/General datasets/TARGET/index.html b/site/Datasets/General_datasets/TARGET/index.html similarity index 100% rename from site/Datasets/General datasets/TARGET/index.html rename to site/Datasets/General_datasets/TARGET/index.html diff --git a/site/Datasets/General datasets/TCGA/index.html b/site/Datasets/General_datasets/TCGA/index.html similarity index 100% rename from site/Datasets/General datasets/TCGA/index.html rename to site/Datasets/General_datasets/TCGA/index.html diff --git a/site/Datasets/General datasets/UK Biobank/index.html b/site/Datasets/General_datasets/UK_Biobank/index.html similarity index 100% rename from site/Datasets/General datasets/UK Biobank/index.html rename to site/Datasets/General_datasets/UK_Biobank/index.html diff --git a/site/Datasets/General datasets/cBioPortal/index.html b/site/Datasets/General_datasets/cBioPortal/index.html similarity index 100% rename from site/Datasets/General datasets/cBioPortal/index.html rename to site/Datasets/General_datasets/cBioPortal/index.html diff --git a/site/Datasets/Inhouse datasets/ALL cohort/index.html b/site/Datasets/Inhouse_datasets/ALL_cohort/index.html similarity index 100% rename from site/Datasets/Inhouse datasets/ALL cohort/index.html rename to site/Datasets/Inhouse_datasets/ALL_cohort/index.html diff --git a/site/Datasets/Inhouse datasets/Damage maps/index.html b/site/Datasets/Inhouse_datasets/Damage_maps/index.html similarity index 100% rename from site/Datasets/Inhouse datasets/Damage maps/index.html rename to site/Datasets/Inhouse_datasets/Damage_maps/index.html diff --git a/site/Datasets/Inhouse datasets/Nanopore data/index.html b/site/Datasets/Inhouse_datasets/Nanopore_data/index.html similarity index 100% rename from site/Datasets/Inhouse datasets/Nanopore data/index.html rename to site/Datasets/Inhouse_datasets/Nanopore_data/index.html diff --git a/site/Datasets/Inhouse datasets/Pediatric Rhabdoid cohort/index.html b/site/Datasets/Inhouse_datasets/Pediatric_Rhabdoid_cohort/index.html similarity index 100% rename from site/Datasets/Inhouse datasets/Pediatric Rhabdoid cohort/index.html rename to site/Datasets/Inhouse_datasets/Pediatric_Rhabdoid_cohort/index.html diff --git a/site/Datasets/Inhouse datasets/Pediatric Secondary neoplasms/index.html b/site/Datasets/Inhouse_datasets/Pediatric_Secondary_neoplasms/index.html similarity index 100% rename from site/Datasets/Inhouse datasets/Pediatric Secondary neoplasms/index.html rename to site/Datasets/Inhouse_datasets/Pediatric_Secondary_neoplasms/index.html diff --git a/site/Datasets/Other data/Canonical transcripts/index.html b/site/Datasets/Other_data/Canonical_transcripts/index.html similarity index 100% rename from site/Datasets/Other data/Canonical transcripts/index.html rename to site/Datasets/Other_data/Canonical_transcripts/index.html diff --git a/site/Datasets/Other data/Genomic regions/index.html b/site/Datasets/Other_data/Genomic_regions/index.html similarity index 100% rename from site/Datasets/Other data/Genomic regions/index.html rename to site/Datasets/Other_data/Genomic_regions/index.html diff --git a/site/Datasets/Other data/Nmdetective/index.html b/site/Datasets/Other_data/Nmdetective/index.html similarity index 100% rename from site/Datasets/Other data/Nmdetective/index.html rename to site/Datasets/Other_data/Nmdetective/index.html diff --git a/site/Datasets/Other data/Reference genomes/index.html b/site/Datasets/Other_data/Reference_genomes/index.html similarity index 100% rename from site/Datasets/Other data/Reference genomes/index.html rename to site/Datasets/Other_data/Reference_genomes/index.html diff --git a/site/Plots and scripts/Intogen-BoostDM plots/index.html b/site/Plots_and_scripts/Intogen-BoostDM_plots/index.html similarity index 100% rename from site/Plots and scripts/Intogen-BoostDM plots/index.html rename to site/Plots_and_scripts/Intogen-BoostDM_plots/index.html diff --git a/site/Plots and scripts/Mutational profile/index.html b/site/Plots_and_scripts/Mutational_profile/index.html similarity index 100% rename from site/Plots and scripts/Mutational profile/index.html rename to site/Plots_and_scripts/Mutational_profile/index.html diff --git a/site/Plots and scripts/Needle plot/index.html b/site/Plots_and_scripts/Needle_plot/index.html similarity index 100% rename from site/Plots and scripts/Needle plot/index.html rename to site/Plots_and_scripts/Needle_plot/index.html diff --git a/site/Tools/Sequencing tools/Bedtools/index.html b/site/Tools/Sequencing_tools/Bedtools/index.html similarity index 100% rename from site/Tools/Sequencing tools/Bedtools/index.html rename to site/Tools/Sequencing_tools/Bedtools/index.html diff --git a/site/Tools/Sequencing tools/Bowtie2/index.html b/site/Tools/Sequencing_tools/Bowtie2/index.html similarity index 100% rename from site/Tools/Sequencing tools/Bowtie2/index.html rename to site/Tools/Sequencing_tools/Bowtie2/index.html diff --git a/site/Tools/Sequencing tools/Cutadapt/index.html b/site/Tools/Sequencing_tools/Cutadapt/index.html similarity index 100% rename from site/Tools/Sequencing tools/Cutadapt/index.html rename to site/Tools/Sequencing_tools/Cutadapt/index.html diff --git a/site/Tools/Sequencing tools/Fastqc/index.html b/site/Tools/Sequencing_tools/Fastqc/index.html similarity index 100% rename from site/Tools/Sequencing tools/Fastqc/index.html rename to site/Tools/Sequencing_tools/Fastqc/index.html diff --git a/site/Tools/Sequencing tools/Samtools/index.html b/site/Tools/Sequencing_tools/Samtools/index.html similarity index 100% rename from site/Tools/Sequencing tools/Samtools/index.html rename to site/Tools/Sequencing_tools/Samtools/index.html diff --git a/site/Tools/Sequencing tools/Trimmomatic/index.html b/site/Tools/Sequencing_tools/Trimmomatic/index.html similarity index 100% rename from site/Tools/Sequencing tools/Trimmomatic/index.html rename to site/Tools/Sequencing_tools/Trimmomatic/index.html diff --git a/site/Tools/Sequencing tools/Variant callers/MosaicForecast/index.html b/site/Tools/Sequencing_tools/Variant_callers/MosaicForecast/index.html similarity index 100% rename from site/Tools/Sequencing tools/Variant callers/MosaicForecast/index.html rename to site/Tools/Sequencing_tools/Variant_callers/MosaicForecast/index.html diff --git a/site/Tools/Sequencing tools/Variant callers/Mutect2/index.html b/site/Tools/Sequencing_tools/Variant_callers/Mutect2/index.html similarity index 100% rename from site/Tools/Sequencing tools/Variant callers/Mutect2/index.html rename to site/Tools/Sequencing_tools/Variant_callers/Mutect2/index.html diff --git a/site/Tools/Sequencing tools/Variant callers/Platinum/index.html b/site/Tools/Sequencing_tools/Variant_callers/Platinum/index.html similarity index 100% rename from site/Tools/Sequencing tools/Variant callers/Platinum/index.html rename to site/Tools/Sequencing_tools/Variant_callers/Platinum/index.html diff --git a/site/Tools/Sequencing tools/Variant callers/Sarek/index.html b/site/Tools/Sequencing_tools/Variant_callers/Sarek/index.html similarity index 100% rename from site/Tools/Sequencing tools/Variant callers/Sarek/index.html rename to site/Tools/Sequencing_tools/Variant_callers/Sarek/index.html diff --git a/site/Tools/Sequencing tools/Vep/index.html b/site/Tools/Sequencing_tools/Vep/index.html similarity index 100% rename from site/Tools/Sequencing tools/Vep/index.html rename to site/Tools/Sequencing_tools/Vep/index.html diff --git a/site/Tools/Sequencing tools/pysam/index.html b/site/Tools/Sequencing_tools/pysam/index.html similarity index 100% rename from site/Tools/Sequencing tools/pysam/index.html rename to site/Tools/Sequencing_tools/pysam/index.html diff --git a/site/Tools/Signature tools/DeconstructSigs/index.html b/site/Tools/Signature_tools/DeconstructSigs/index.html similarity index 100% rename from site/Tools/Signature tools/DeconstructSigs/index.html rename to site/Tools/Signature_tools/DeconstructSigs/index.html diff --git a/site/Tools/Signature tools/SigProfiler/index.html b/site/Tools/Signature_tools/SigProfiler/index.html similarity index 100% rename from site/Tools/Signature tools/SigProfiler/index.html rename to site/Tools/Signature_tools/SigProfiler/index.html diff --git a/site/Tools/Signature tools/SigProfilerJulia/index.html b/site/Tools/Signature_tools/SigProfilerJulia/index.html similarity index 100% rename from site/Tools/Signature tools/SigProfilerJulia/index.html rename to site/Tools/Signature_tools/SigProfilerJulia/index.html diff --git a/site/Tools/Signature tools/mSigHDP/index.html b/site/Tools/Signature_tools/mSigHDP/index.html similarity index 100% rename from site/Tools/Signature tools/mSigHDP/index.html rename to site/Tools/Signature_tools/mSigHDP/index.html diff --git a/site/Tools/Signature tools/mSignAct/index.html b/site/Tools/Signature_tools/mSignAct/index.html similarity index 100% rename from site/Tools/Signature tools/mSignAct/index.html rename to site/Tools/Signature_tools/mSignAct/index.html