From 63e34868b23867cee965a7c325f8c8c26a29ae95 Mon Sep 17 00:00:00 2001 From: bfurtwa Date: Tue, 23 Mar 2021 17:57:20 +0100 Subject: [PATCH] revision --- README.md | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index 35dbee1..b00ed34 100644 --- a/README.md +++ b/README.md @@ -27,7 +27,7 @@ Usage is exemplified in the notebooks for the analysis from the mansucript "Quan The analysis can be replicated using the provided conda environment: ``` -conda env create -f Schoof_et_al/code/environment.yml` +conda env create -f Schoof_et_al/code/environment.yml conda activate sceptre pip install Schoof_et_al/code/sceptre-0.1-py3-none-any.whl ``` @@ -36,7 +36,8 @@ The required data can be downloaded from http://proteomecentral.proteomexchange.org using the dataset identifier PXD020586 -Find the notebooks in the subdirectory `Schoof_et_al/code` and the place the required data in `Schoof_et_al/data`. +Find the notebooks in the subdirectory `Schoof_et_al/code`, place the required data in `Schoof_et_al/data`, and create the folder `Schoof_et_al/results/tmp/`. + The following notebooks process the different datasets: