From 9fcb1670c3b8a82e6b0b2a09aad614d0ac0fe14a Mon Sep 17 00:00:00 2001 From: Sebastian Lobentanzer Date: Sat, 9 Dec 2023 17:50:09 +0100 Subject: [PATCH] missing citation --- content/21.sup.note.1.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/content/21.sup.note.1.md b/content/21.sup.note.1.md index 5b26e34..4aefd3e 100644 --- a/content/21.sup.note.1.md +++ b/content/21.sup.note.1.md @@ -7,6 +7,6 @@ For instance, a clinical researcher may use protein information from UniProtKB [ Finding the most suitable KG for a specific task is challenging and time-consuming; they are published in isolation and there is no registry [@doi:10.1093/bib/bbac404;@doi:10.1146/annurev-biodatasci-010820-091627]. Few available KG solutions perfectly fit the task the individual researcher wants to perform, but creating custom KGs is only possible for those that can afford years of development time by an individual [@doi:10.1016/j.celrep.2019.09.017;@doi:10.1038/s41467-022-33026-0] or even entire teams [@doi:10.1101/2021.10.28.466262]. Smaller or non-bioinformatics labs need to choose from publicly available KGs, limiting customisation and the use of non-public data. -There exist frameworks to build certain kinds of KG from scratch [@doi:10.1101/2020.04.30.071407;@doi:10.1101/631812], but these are difficult to use for researchers outside of the ontology subfield and often have a rigid underlying data model 10,[@doi:10.1101/2020.08.17.254839]. +There exist frameworks to build certain kinds of KG from scratch [@doi:10.1101/2020.04.30.071407;@doi:10.1101/631812], but these are difficult to use for researchers outside of the ontology subfield and often have a rigid underlying data model [@doi:10.1146/annurev-biodatasci-010820-091627;@doi:10.1101/2020.08.17.254839]. Even task-specific knowledge graphs sometimes need to be built locally by the user due to licensing or maintenance reasons, which requires significant technical expertise [@doi:10.1038/s41467-022-28348-y]. Modifying an existing, comprehensive KG for a specific purpose is a non-trivial and often manual process prone to lack of reproducibility [@doi:10.1101/2022.11.29.518441].