createNWB

Compile YAU-Lab¹ behavior *.yaml, *.eye and electrophysiological² *.nev & *.nsX output files into an NWB³ format.

It uses Python 3.8 (https://www.python.org/downloads/release/python-383/)

Note

only tested on Windows

Setup the environment

Create the environment

Open a new terminal and create a virtual environment:

py -3.8 -m virtualenv desiredFolder\NWBenv -p python3.8

Activate the environment

desiredFolder\NWBenv\Scripts\Activate

Install libraries

NWB and YAML

python -m pip install PyYAML
python -m pip install -U pynwb
python -m pip install nwbinspector

Ripple² library

It requires python library for reading *.nev and *nsX files.

Email Ripple support [email protected] to get the folder "pyns3_beta"

Once you get the folder, copy the folder into:

desiredFolder\NWBenv\Lib\site-packages\

Install pyns3_beta from main
```
cd desiredFolder\NWBenv\Lib\site-packages\pyns3_beta
python -m pip install -e .
```

How to use

In process of revision how to use this first version