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SAMReaderFactory interface/implementation #5338

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cmnbroad opened this issue Oct 22, 2018 · 1 comment
Open

SAMReaderFactory interface/implementation #5338

cmnbroad opened this issue Oct 22, 2018 · 1 comment
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@cmnbroad
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HTSJDK3
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Engine-Q12019

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@cmnbroad
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Include codec registry, versioning/upgrade chain framework.
@cmnbroad cmnbroad self-assigned this Oct 22, 2018
@cmnbroad cmnbroad added this to the Engine-Q42018 milestone Oct 22, 2018
@magicDGS
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I believe that it will be more useful to have a common reader-factory not only for SAM/BAM/CRAM but for any kind of record. I open in the htsjdk3 project samtools/htsjdk-next-beta#32 to track this.

@droazen droazen modified the milestones: Engine-Q42018, Engine-Q12019 Feb 4, 2019
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