From aee56ecf1b720d32e7b34144875a0c1d957ed51b Mon Sep 17 00:00:00 2001 From: aawdeh Date: Tue, 28 Jan 2025 14:09:37 -0500 Subject: [PATCH] remove comments --- pipelines/skylab/atac/atac.wdl | 3 --- 1 file changed, 3 deletions(-) diff --git a/pipelines/skylab/atac/atac.wdl b/pipelines/skylab/atac/atac.wdl index 35a2676e58..4ad785eeec 100644 --- a/pipelines/skylab/atac/atac.wdl +++ b/pipelines/skylab/atac/atac.wdl @@ -784,10 +784,7 @@ task PeakCalling { chromsize_dict = pd.Series(chromsize_dict[1].values, index=chromsize_dict[0]).to_dict() # merge peaks and create peak matrix peaks = snap.tl.merge_peaks(atac_data_mod.uns['macs3'], chromsize_dict) - print(peaks) peak_matrix = snap.pp.make_peak_matrix(atac_data_mod, use_rep=peaks['Peaks']) - print(type(peak_matrix)) - print(peak_matrix) print("Convert pl.DataFrame to pandas DataFrame") # Convert pl.DataFrame to pandas DataFrame