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CHANGELOG.md

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Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

Unreleased

  • Add new changes here.

v1.2 - 2021-12-23

  • LinkML representation
    • Switched from setup.py to Poetry as the package and environment manager.
    • Removed local sheet2linkml and moved to a separate repo.

v1.1 - 2021-09-20

  • Model changes
    • Renamed ccdh to crdch in the model.
    • Separated CodeableConcepts from the enums upon which they are based.
      • Specifically, each CodeableConcept now uses the LinkML values_from field to store a reference to the enum from which terms are expected to be used. See PR #115 for details.
    • Updated terminologies to the latest from the Terminology Server.
    • Minor changes made during the CCDH Pilot (August to September 2021).
  • LinkML representation
    • Updated repo based on the linkml model template.
      • Some LinkML model template files, like MakeConfig hav been moved into from_template. Note that MakeConfig makes extensive changes to numerous files including the model, tests, docs and PyPI metadata. These updates are based on model/CONFIG.yaml. Updating with MakeConfig could be very convenient but a strategy combining MakeConfig with manual updates to these files could lose important work. It's probably best to commit before running MakeConfig.
    • Necessary fixes to the squeaky-clean target in the Makefile.
    • We should have standardized to Python 3.7 as a minimum version (see setup.py, setup.cfg and tox.ini).

v1.0.1 - 2021-06-08

  • Model changes
    • Minor changes to the model descriptions and mappings.
    • Improved enumeration for CRDC-H.Treatment.treatment_effect.
  • LinkML representation
    • Modified LinkML to improve documentation.
  • Google Sheet Generator
    • Improved warning for duplicable permissible values in enumeration.

v1.0 - 2021-06-01

  • Multiple changes to the model, repository organization and Makefile.

v0.2 - 2021-05-14

  • Replaced CRDC-H model with newly generated model.
  • Used Mike to publish multiple versions of the same repository to GitHub Pages via the gh-pages branch.

v0.1 - 2021-05-12

  • Initial version of the CCDH model as built by @jiaola.
  • Includes the new version of the Google Sheet to LinkML generator built by @gaurav.