From d2ba71c4b8442cf7b38f30ca35f3971d66b2e27e Mon Sep 17 00:00:00 2001 From: "Michael R. Crusoe" Date: Fri, 8 Mar 2024 13:02:01 +0100 Subject: [PATCH] biocontainer tests: use version corresponding to v2 Docker Image Format --- tests/seqtk_seq.cwl | 2 +- tests/seqtk_seq_with_docker.cwl | 4 ++-- tests/test_dependencies.py | 2 +- 3 files changed, 4 insertions(+), 4 deletions(-) diff --git a/tests/seqtk_seq.cwl b/tests/seqtk_seq.cwl index 4e1029a692..4a5441da46 100755 --- a/tests/seqtk_seq.cwl +++ b/tests/seqtk_seq.cwl @@ -22,4 +22,4 @@ hints: packages: - package: seqtk version: - - r93 + - 1.4--he4a0461_1 diff --git a/tests/seqtk_seq_with_docker.cwl b/tests/seqtk_seq_with_docker.cwl index aeff27f88b..d0a75f1d54 100755 --- a/tests/seqtk_seq_with_docker.cwl +++ b/tests/seqtk_seq_with_docker.cwl @@ -22,6 +22,6 @@ hints: packages: - package: seqtk version: - - '1.2' + - '1.4--he4a0461_1' DockerRequirement: - dockerPull: quay.io/biocontainers/seqtk:1.2--0 + dockerPull: quay.io/biocontainers/seqtk:1.4--he4a0461_1 diff --git a/tests/test_dependencies.py b/tests/test_dependencies.py index c3043cd3d0..2acbf9f486 100644 --- a/tests/test_dependencies.py +++ b/tests/test_dependencies.py @@ -53,7 +53,7 @@ def test_biocontainers_resolution(tmp_path: Path) -> None: get_container_from_software_requirements( True, tool, container_image_cache_path=str(tmp_path) ) - == "quay.io/biocontainers/seqtk:r93--0" + == "quay.io/biocontainers/seqtk:1.4--he4a0461_1" )