From 435ccd2291040e9a047bc7f5b244523854679b62 Mon Sep 17 00:00:00 2001 From: Pedro Mendes Date: Tue, 20 Aug 2024 11:55:24 -0400 Subject: [PATCH] removed the --cn option --- examples/Neuron_networks_I/ex4case2.cps | 692 +++++++++++------------- 1 file changed, 325 insertions(+), 367 deletions(-) diff --git a/examples/Neuron_networks_I/ex4case2.cps b/examples/Neuron_networks_I/ex4case2.cps index 287d749..f8d2a71 100644 --- a/examples/Neuron_networks_I/ex4case2.cps +++ b/examples/Neuron_networks_I/ex4case2.cps @@ -1,15 +1,15 @@ - + - + - + Pospischil et al. (2008) Minimal Hodgkin–Huxley type models for different classes of cortical and thalamic neurons. Biological Cybernetics 99:427–441 @@ -45,7 +45,7 @@ - 2024-08-15T12:39:27.333315 + 2024-08-20T09:39:36.541897 @@ -53,7 +53,7 @@ -

Processed with sbmodelr to produce a set of 2 replicas of RSA_neuron.cps

../../sbmodelr --output ex4case2.cps -n fb2.dot --ode-synaptic V --synapse-g 0.08 --cn 0 uni RSA_neuron.cps 2

notes of original file below:

RSA Neuron

+

Processed with sbmodelr to produce a set of 2 replicas of RSA_neuron.cps

../../sbmodelr --output ex4case2.cps -n fb2.dot --ode-synaptic V --synapse-g 0.08 RSA_neuron.cps 2

notes of original file below:

RSA Neuron

This is a 9-ODE model of a regular spiking neuron with adaptation (RSA), inspired by the Hodgin-Huxley model, first proposed by Pospischil et al. (2008) and re-used in Giannari and Astolfi (2022).

Since this model is based on voltages and intensities, all variables and differential equations are defined under Global Quantities (there are no reactions and no species here). The model includes a sequence of current pulses (10 µA/cm2 for 1ms), spaced according to a Poisson distribution with an average of 1 pulse per 25 ms, which eventually cause action potentials.

@@ -68,10 +68,10 @@ - + - + @@ -79,10 +79,10 @@ mV - + - + @@ -90,10 +90,10 @@ mV - + - + @@ -101,10 +101,10 @@ mV - + - + @@ -112,10 +112,10 @@ mV - + - + @@ -123,10 +123,10 @@ mV - + - + @@ -134,10 +134,10 @@ uF/cm^2 - + - + @@ -145,10 +145,10 @@ mS/cm^2 - + - + @@ -156,10 +156,10 @@ mS/cm^2 - + - + @@ -167,10 +167,10 @@ mS/cm^2 - + - + @@ -178,10 +178,10 @@ mS/cm^2 - + - + @@ -189,10 +189,10 @@ mS/cm^2 - + - + @@ -200,10 +200,10 @@ ms - + - + @@ -211,24 +211,24 @@ uA/cm^2 - + - + - (<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[I_inj_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_K_1],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[n_1],Reference=Value>^4*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_K_1],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_Na_1],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[m_1],Reference=Value>^3*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[h_1],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_Na_1],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_L_1],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_L_1],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_M_1],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[p_1],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_K_1],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_Ca_1],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[q_1],Reference=Value>^2*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[s_1],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_Ca_1],Reference=Value>))/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[C_M_1],Reference=Value>+<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_c_V_2\,1_synapse],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[br_V_2\,1],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[Vsyn_V_synapse_2-1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>) + (<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[I_inj_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_K_1],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[n_1],Reference=Value>^4*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_K_1],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_Na_1],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[m_1],Reference=Value>^3*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[h_1],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_Na_1],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_L_1],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_L_1],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_M_1],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[p_1],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_K_1],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_Ca_1],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[q_1],Reference=Value>^2*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[s_1],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_Ca_1],Reference=Value>))/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[C_M_1],Reference=Value>+<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_c_V_2\,1_synapse],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[br_V_2\,1],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[Vsyn_V_synapse],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>) mV - + - + @@ -236,10 +236,10 @@ (<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_1],Reference=Value>-15)*(-0.032/(exp(-(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_1],Reference=Value>-15)/5)-1)) - + - + @@ -247,10 +247,10 @@ (<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_1],Reference=Value>-13)*(-0.32/(exp(-(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_1],Reference=Value>-13)/4)-1)) - + - + @@ -258,10 +258,10 @@ 0.128*exp(-(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_1],Reference=Value>-17)/18) - + - + @@ -272,10 +272,10 @@ 1 - + - + @@ -283,10 +283,10 @@ 0.0055*(-27-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>)/(exp((-27-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>)/3.8)-1) - + - + @@ -294,10 +294,10 @@ 0.000457*exp((-13-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>)/50) - + - + @@ -305,10 +305,10 @@ 0.5*exp(-(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_1],Reference=Value>-10)/40) - + - + @@ -319,10 +319,10 @@ 0.28*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_1],Reference=Value>-40)/(exp((<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_1],Reference=Value>-40)/5)-1) - + - + @@ -330,10 +330,10 @@ 4/(exp(-(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_1],Reference=Value>-40)/5)+1) - + - + @@ -341,10 +341,10 @@ 0.0065/(exp((-15-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>)/28)+1) - + - + @@ -352,10 +352,10 @@ 0.94*exp((-75-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>)/17) - + - + @@ -366,10 +366,10 @@ 1 - + - + @@ -380,10 +380,10 @@ 1 - + - + @@ -394,10 +394,10 @@ 1 - + - + @@ -408,10 +408,10 @@ 1 - + - + @@ -422,10 +422,10 @@ 1 - + - + @@ -436,10 +436,10 @@ 1 - + - + @@ -450,10 +450,10 @@ ms - + - + @@ -461,10 +461,10 @@ ms - + - + @@ -472,10 +472,10 @@ ms - + - + @@ -483,10 +483,10 @@ ms - + - + @@ -494,10 +494,10 @@ uA/cm^2 - + - + @@ -505,10 +505,10 @@ 1/ms - + - + @@ -516,10 +516,10 @@ mV - + - + @@ -527,10 +527,10 @@ mV - + - + @@ -538,10 +538,10 @@ mV - + - + @@ -549,10 +549,10 @@ mV - + - + @@ -560,10 +560,10 @@ mV - + - + @@ -571,10 +571,10 @@ uF/cm^2 - + - + @@ -582,10 +582,10 @@ mS/cm^2 - + - + @@ -593,10 +593,10 @@ mS/cm^2 - + - + @@ -604,10 +604,10 @@ mS/cm^2 - + - + @@ -615,10 +615,10 @@ mS/cm^2 - + - + @@ -626,10 +626,10 @@ mS/cm^2 - + - + @@ -637,10 +637,10 @@ ms - + - + @@ -648,24 +648,24 @@ uA/cm^2 - + - + - (<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[I_inj_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_K_2],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[n_2],Reference=Value>^4*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_K_2],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_Na_2],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[m_2],Reference=Value>^3*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[h_2],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_Na_2],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_L_2],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_L_2],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_M_2],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[p_2],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_K_2],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_Ca_2],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[q_2],Reference=Value>^2*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[s_2],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_Ca_2],Reference=Value>))/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[C_M_2],Reference=Value>+<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_c_V_1\,2_synapse],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[br_V_1\,2],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[Vsyn_V_synapse_1-2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>) + (<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[I_inj_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_K_2],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[n_2],Reference=Value>^4*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_K_2],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_Na_2],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[m_2],Reference=Value>^3*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[h_2],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_Na_2],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_L_2],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_L_2],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_M_2],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[p_2],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_K_2],Reference=Value>)-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_Ca_2],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[q_2],Reference=Value>^2*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[s_2],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_Ca_2],Reference=Value>))/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[C_M_2],Reference=Value>+<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[g_c_V_1\,2_synapse],Reference=Value>*<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[br_V_1\,2],Reference=Value>*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[Vsyn_V_synapse],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>) mV - + - + @@ -673,10 +673,10 @@ (<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_2],Reference=Value>-15)*(-0.032/(exp(-(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_2],Reference=Value>-15)/5)-1)) - + - + @@ -684,10 +684,10 @@ (<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_2],Reference=Value>-13)*(-0.32/(exp(-(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_2],Reference=Value>-13)/4)-1)) - + - + @@ -695,10 +695,10 @@ 0.128*exp(-(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_2],Reference=Value>-17)/18) - + - + @@ -709,10 +709,10 @@ 1 - + - + @@ -720,10 +720,10 @@ 0.0055*(-27-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>)/(exp((-27-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>)/3.8)-1) - + - + @@ -731,10 +731,10 @@ 0.000457*exp((-13-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>)/50) - + - + @@ -742,10 +742,10 @@ 0.5*exp(-(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_2],Reference=Value>-10)/40) - + - + @@ -756,10 +756,10 @@ 0.28*(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_2],Reference=Value>-40)/(exp((<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_2],Reference=Value>-40)/5)-1) - + - + @@ -767,10 +767,10 @@ 4/(exp(-(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_T_2],Reference=Value>-40)/5)+1) - + - + @@ -778,10 +778,10 @@ 0.0065/(exp((-15-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>)/28)+1) - + - + @@ -789,10 +789,10 @@ 0.94*exp((-75-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>)/17) - + - + @@ -803,10 +803,10 @@ 1 - + - + @@ -817,10 +817,10 @@ 1 - + - + @@ -831,10 +831,10 @@ 1 - + - + @@ -845,10 +845,10 @@ 1 - + - + @@ -859,10 +859,10 @@ 1 - + - + @@ -873,10 +873,10 @@ 1 - + - + @@ -887,10 +887,10 @@ ms - + - + @@ -898,10 +898,10 @@ ms - + - + @@ -909,10 +909,10 @@ ms - + - + @@ -920,10 +920,10 @@ ms - + - + @@ -931,10 +931,10 @@ uA/cm^2 - + - + @@ -942,106 +942,82 @@ 1/ms - + - + - + - + - + - + - + - + - + - + - (1/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[tau_r_V_synapse_1-2],Reference=Value>-1/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[tau_d_V_synapse_1-2],Reference=Value>)*(1-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[br_V_1\,2],Reference=Value>)/(1+exp(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V0_V_synapse],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>))-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[br_V_1\,2],Reference=Value>/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[tau_d_V_synapse_1-2],Reference=Value> + (1/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[tau_r_V_synapse],Reference=Value>-1/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[tau_d_V_synapse],Reference=Value>)*(1-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[br_V_1\,2],Reference=Value>)/(1+exp(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V0_V_synapse],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_1],Reference=Value>))-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[br_V_1\,2],Reference=Value>/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[tau_d_V_synapse],Reference=Value> - + - + - + - - - - - - - - - - - - - - - - - - - - - - - - - + - (1/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[tau_r_V_synapse_2-1],Reference=Value>-1/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[tau_d_V_synapse_2-1],Reference=Value>)*(1-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[br_V_2\,1],Reference=Value>)/(1+exp(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V0_V_synapse],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>))-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[br_V_2\,1],Reference=Value>/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[tau_d_V_synapse_2-1],Reference=Value> + (1/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[tau_r_V_synapse],Reference=Value>-1/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[tau_d_V_synapse],Reference=Value>)*(1-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[br_V_2\,1],Reference=Value>)/(1+exp(<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V0_V_synapse],Reference=Value>-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[V_2],Reference=Value>))-<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[br_V_2\,1],Reference=Value>/<CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[tau_d_V_synapse],Reference=Value> - + - + - + - + @@ -1061,10 +1037,10 @@ - + - + @@ -1084,7 +1060,7 @@ - + <CN=Root,Model=a set of 2 replicas of RSA neuron,Reference=Time> > <CN=Root,Model=a set of 2 replicas of RSA neuron,Vector=Values[pulse_on_2],Reference=Value> and false @@ -1101,10 +1077,10 @@ - + - + @@ -1125,13 +1101,13 @@ - - + + - + @@ -1217,15 +1193,12 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> + + - - - + - - - @@ -1234,100 +1207,97 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - 0 -71.910681987541821 0.0022222453408539942 0.00044978431039494646 0.99992644412077247 0.024338216117071081 2.3214304254075944e-06 0.66350877785683593 -71.910681987541821 0.0022222453408539942 0.00044978431039494646 0.99992644412077247 0.024338216117071081 2.3214304254075944e-06 0.66350877785683593 0 0 0.0021177679639737155 0.007019440281679285 0.78783633716905699 0.024338216117071085 1.8195439396980193e-06 0.0014845946197623323 0.95086790154804823 15.599216970044985 5.7954257344224138e-05 0.000752895929432276 0.78380109773648854 88.724338492363756 0.0021177679639737155 0.007019440281679285 0.78783633716905699 0.024338216117071085 1.8195439396980193e-06 0.0014845946197623323 0.95086790154804823 15.599216970044985 5.7954257344224138e-05 0.000752895929432276 0.78380109773648854 88.724338492363756 -90 56 -70.299999999999997 0 -56.200000000000003 1 6 0.074999999999999997 0 56 0.020500000000000001 608 0 5 2500 1 10 0.040000000000000001 -90 56 -70.299999999999997 0 -56.200000000000003 1 6 0.074999999999999997 0 56 0.020500000000000001 608 0 5 2500 1 10 0.040000000000000001 -20 0.5 10 20 0.080000000000000002 0.5 10 20 0.080000000000000002 + 0 -71.910681987541821 0.0022222453408539942 0.00044978431039494646 0.99992644412077247 0.024338216117071081 2.3214304254075944e-06 0.66350877785683593 -71.910681987541821 0.0022222453408539942 0.00044978431039494646 0.99992644412077247 0.024338216117071081 2.3214304254075944e-06 0.66350877785683593 0 0 0.0021177679639737155 0.007019440281679285 0.78783633716905699 0.024338216117071085 1.8195439396980193e-06 0.0014845946197623323 0.95086790154804823 15.599216970044985 5.7954257344224138e-05 0.000752895929432276 0.78380109773648854 88.724338492363756 0.0021177679639737155 0.007019440281679285 0.78783633716905699 0.024338216117071085 1.8195439396980193e-06 0.0014845946197623323 0.95086790154804823 15.599216970044985 5.7954257344224138e-05 0.000752895929432276 0.78380109773648854 88.724338492363756 -90 56 -70.299999999999997 0 -56.200000000000003 1 6 0.074999999999999997 0 56 0.020500000000000001 608 0 5 2500 1 10 0.040000000000000001 -90 56 -70.299999999999997 0 -56.200000000000003 1 6 0.074999999999999997 0 56 0.020500000000000001 608 0 5 2500 1 10 0.040000000000000001 0.5 10 -20 20 0.080000000000000002 0.080000000000000002 - - + + @@ -1345,8 +1315,8 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - - + + @@ -1367,7 +1337,7 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + @@ -1379,15 +1349,15 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - - + + - - + + @@ -1408,8 +1378,8 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - - + + @@ -1439,10 +1409,10 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - - + + - + @@ -1450,8 +1420,8 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - - + + @@ -1465,8 +1435,8 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - - + + @@ -1478,8 +1448,8 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - - + + @@ -1502,14 +1472,14 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - - + + - + @@ -1545,15 +1515,15 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - - + + - + - + @@ -1580,7 +1550,7 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + Automatically generated report. @@ -1588,7 +1558,7 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + Automatically generated report. @@ -1599,7 +1569,7 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + Automatically generated report. @@ -1607,7 +1577,7 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + Automatically generated report. @@ -1631,7 +1601,7 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + Automatically generated report. @@ -1655,7 +1625,7 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + Automatically generated report. @@ -1667,7 +1637,7 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + Automatically generated report. @@ -1679,7 +1649,7 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + Automatically generated report. @@ -1691,7 +1661,7 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + Automatically generated report. @@ -1703,7 +1673,7 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + Automatically generated report. @@ -1715,7 +1685,7 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + Automatically generated report. @@ -1729,15 +1699,15 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + - + - + @@ -1746,10 +1716,10 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + - + @@ -1758,20 +1728,20 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + - + - + - + @@ -1780,10 +1750,10 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + - + @@ -1792,41 +1762,29 @@ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"> - + - + - + - - - - - - - - - - - - - + - + - +