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FAILED (possibly; see if diffs above look OK) #3
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Your installation is not complete. On the repo page, the second section below the directory is a "Quick start guide". It has 3 steps and you missed the 3rd where you need to define the environment variable EFNDATA. Set this variable to point to the efndata directory in the rnamotif distro and then everything will work.
Tom On Wednesday, February 28, 2024 at 09:47:26 PM PST, z626093820 ***@***.***> wrote:
When I use the make test command, the result shows PASSED, but there is also an error. May I ask if I have successfully installed it?Thank you!
Running sprintf.strict test:
sprintf.strict.descr: complete descr length: min/max = 12/18
20240229 133717 T000000: ERROR: RM_getefndata: efn.c:163: No efn data directory.
1,85d0
< #RM scored
< #RM descr ctx h5 ss h3 ctx
< #RM dfile sprintf.strict.descr
< ACARRDX -12.500,6,gcga 0 81 16 tactg gggtgg gcga ccaccc gggaa
< ANNRRO -15.400,6,gaaa 0 110 16 gataa ccccgg gaaa ccgggg ctaat
< BORRR16SX -11.100 0 884 20 gggga gta tg ctc gcaa gag tg tac gcgag
...
< HLPRRX -11.100 0 1266 21 agggc agc gaa ccc gcaa ggg ga gct aatct
< WHTMTRRE -11.100 0 66 20 agcta gcc gt agg ggaa cct gt ggc tgcat
< LANRREA3 -11.200 0 115 21 gtcta ccc tgg ccc ggaa ggg tt ggg haacc
< HNMRR18S -11.400 0 158 22 ctatg ccc tga ccc gcga ggg gac ggg tggat
< CLWRNA -11.900 0 180 22 ctaag ccc tga ccc gcaa ggg gac ggg tggat
FAILED (possibly; see if diffs above look OK)
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yes it works ,Thank you! |
When I use the make test command, the result shows PASSED, but there is also an error. May I ask if I have successfully installed it?Thank you!
Running sprintf.strict test:
sprintf.strict.descr: complete descr length: min/max = 12/18
20240229 133717 T000000: ERROR: RM_getefndata: efn.c:163: No efn data directory.
1,85d0
< #RM scored
< #RM descr ctx h5 ss h3 ctx
< #RM dfile sprintf.strict.descr
< ACARRDX -12.500,6,gcga 0 81 16 tactg gggtgg gcga ccaccc gggaa
< ANNRRO -15.400,6,gaaa 0 110 16 gataa ccccgg gaaa ccgggg ctaat
< BORRR16SX -11.100 0 884 20 gggga gta tg ctc gcaa gag tg tac gcgag
...
< HLPRRX -11.100 0 1266 21 agggc agc gaa ccc gcaa ggg ga gct aatct
< WHTMTRRE -11.100 0 66 20 agcta gcc gt agg ggaa cct gt ggc tgcat
< LANRREA3 -11.200 0 115 21 gtcta ccc tgg ccc ggaa ggg tt ggg haacc
< HNMRR18S -11.400 0 158 22 ctatg ccc tga ccc gcga ggg gac ggg tggat
< CLWRNA -11.900 0 180 22 ctaag ccc tga ccc gcaa ggg gac ggg tggat
FAILED (possibly; see if diffs above look OK)
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