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datasets.txt
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dataset spatial_locs expr_matrix metadata
ST_OB1 https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2016_ST_olfactory_bulb/cell_locations/Rep11_MOB_0_location.txt https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2016_ST_olfactory_bulb/count_matrix/Rep11_MOB_0_expr.txt
ST_OB2 https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2016_ST_olfactory_bulb/cell_locations/Rep12_MOB_0_location.txt https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2016_ST_olfactory_bulb/count_matrix/Rep12_MOB_0_expr.txt
codex_spleen https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2018_codex_spleen/cell_locations/codex_BALBc_3_coord.txt https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2018_codex_spleen/count_matrix/codex_BALBc_3_expression.txt.gz https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2018_codex_spleen/cell_locations/codex_BALBc_3_annotation.txt|https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2018_codex_spleen/cell_locations/cell_type_annotation.csv
cycif_PDAC https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2018_CyCIF_PDAC/cell_locations/cyCIF_PDAC_coord.txt https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2018_CyCIF_PDAC/count_matrix/cyCIF_PDAC_expression.txt.gz https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2018_CyCIF_PDAC/cell_locations/cyCIF_PDAC_annot.txt
starmap_3D_cortex https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2018_starmap_3D_cortex/cell_locations/STARmap_3D_data_cell_locations.txt https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2018_starmap_3D_cortex/count_matrix/STARmap_3D_data_expression.txt
osmfish_SS_cortex https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2018_osmFISH_SScortex/cell_locations/osmFISH_prep_cell_coordinates.txt https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2018_osmFISH_SScortex/count_matrix/osmFISH_prep_expression.txt
merfish_preoptic https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2018_merFISH_science_hypo_preoptic/cell_locations/merFISH_3D_data_cell_locations.txt https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2018_merFISH_science_hypo_preoptic/count_matrix/merFISH_3D_data_expression.txt.gz
seqfish_SS_cortex https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2019_seqfish_plus_SScortex/cell_locations/cortex_svz_centroids_coord.txt https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2019_seqfish_plus_SScortex/count_matrix/cortex_svz_expression.txt https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2019_seqfish_plus_SScortex/cell_locations/cortex_svz_centroids_annot.txt
seqfish_OB https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2019_seqfish_plus_olfactory_bulb/cell_locations/OB_centroids_coord.txt https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2019_seqfish_plus_olfactory_bulb/count_matrix/OB_expression.txt https://raw.githubusercontent.com/RubD/spatial-datasets/master/data/2019_seqfish_plus_olfactory_bulb/cell_locations/OB_centroids_annot.txt